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SDF4
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SDF4
chr1:1,116,930..1,332,001, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_1122272_G_A | chr1:1122272 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr1_1122267_C_G | chr1:1122267 | -1.000 | -1.000 | -1.000 | 0.018% |
| chr1_1122278_G_T | chr1:1122278 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr1_1122277_C_T | chr1:1122277 | -1.000 | -1.000 | -1.000 | 0.0039% |
| chr1_1128564_G_A | chr1:1128564 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr1_1122265_G_C | chr1:1122265 | -1.000 | -0.685 | -1.000 | <0.001% |
| chr1_1124910_A_G | chr1:1124910 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr1_1128575_T_A | chr1:1128575 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr1_1122266_C_A | chr1:1122266 | -0.995 | -0.565 | -1.000 | <0.001% |
| chr1_1122268_T_C | chr1:1122268 | -1.000 | -0.562 | -1.000 | <0.001% |
| chr1_1122278_G_A | chr1:1122278 | -0.892 | -0.444 | -1.000 | 0.050% |
| chr1_1124939_G_A | chr1:1124939 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr1_1128590_C_T | chr1:1128590 | -0.977 | -0.921 | -1.000 | <0.001% |
| chr1_1124858_C_A | chr1:1124858 | -0.928 | -1.000 | -1.000 | <0.001% |
| chr1_1144637_G_T | chr1:1144637 | 0.131 | -0.088 | -1.000 | <0.001% |
| chr1_1124855_G_A | chr1:1124855 | -0.879 | -1.000 | -1.000 | 6.04% |
| chr1_1133484_G_T | chr1:1133484 | 0.864 | 0.916 | 1.000 | <0.001% |
| chr1_1122357_G_C | chr1:1122357 | 0.383 | 0.335 | 1.000 | 0.0013% |
| chr1_1124928_A_G | chr1:1124928 | -0.802 | -0.876 | -1.000 | 0.0013% |
| chr1_1133533_C_T | chr1:1133533 | 0.351 | 0.501 | 1.000 | 0.0079% |
| chr1_1133559_A_G | chr1:1133559 | -0.510 | -0.680 | -1.000 | <0.001% |
| chr1_1133551_A_G | chr1:1133551 | -0.450 | -0.690 | -1.000 | 0.0020% |
| chr1_1124943_G_A | chr1:1124943 | 0.722 | 0.845 | 0.906 | <0.001% |
| chr1_1130535_G_A | chr1:1130535 | -0.679 | -0.764 | -0.918 | 0.0079% |
| chr1_1130545_C_G | chr1:1130545 | -0.656 | -0.680 | -0.935 | <0.001% |
| chr1_1124853_G_T | chr1:1124853 | -0.644 | -0.838 | -0.847 | 0.403% |
| chr1_1133558_C_T | chr1:1133558 | 0.623 | 0.689 | 0.429 | 0.0033% |
| chr1_1133581_C_T | chr1:1133581 | 0.478 | 0.635 | 1.000 | <0.001% |
| chr1_1128611_G_A | chr1:1128611 | 0.617 | 0.374 | 0.518 | <0.001% |
| chr1_1128710_C_T | chr1:1128710 | 0.606 | 0.569 | 0.600 | 0.0072% |
| chr1_1130534_C_T | chr1:1130534 | 0.599 | 0.798 | 1.000 | <0.001% |
| chr1_1133553_T_C | chr1:1133553 | -0.489 | -0.797 | -1.000 | 0.0020% |
| chr1_1128606_T_C | chr1:1128606 | 0.561 | 0.372 | 0.494 | <0.001% |
| chr1_1130515_G_A | chr1:1130515 | -0.557 | -0.635 | -0.653 | 0.0039% |
| chr1_1133540_G_T | chr1:1133540 | -0.252 | -0.305 | -0.918 | <0.001% |
| chr1_1133525_G_A | chr1:1133525 | 0.314 | 0.412 | 0.888 | 0.0026% |
| chr1_1133540_G_A | chr1:1133540 | -0.341 | -0.335 | -0.885 | 0.016% |
| chr1_1128657_G_C | chr1:1128657 | -0.491 | -0.247 | -0.506 | <0.001% |
| chr1_1133503_G_A | chr1:1133503 | -0.340 | -0.414 | -0.865 | 14.0% |
| chr1_1144631_G_A | chr1:1144631 | 0.053 | 0.160 | 0.859 | 0.0079% |
| chr1_1130492_A_T | chr1:1130492 | -0.483 | -0.491 | -0.735 | 0.019% |
| chr1_1124942_C_T | chr1:1124942 | -0.478 | -0.591 | -0.847 | <0.001% |
| chr1_1133492_C_G | chr1:1133492 | -0.473 | -0.575 | -0.794 | 0.0013% |
| chr1_1122305_G_A | chr1:1122305 | -0.358 | -0.140 | -0.824 | 0.0026% |
| chr1_1133530_G_A | chr1:1133530 | 0.135 | 0.275 | 0.818 | 0.0013% |
| chr1_1133554_G_C | chr1:1133554 | -0.415 | -0.624 | -0.809 | <0.001% |
| chr1_1124975_G_C | chr1:1124975 | -0.446 | -0.419 | -0.565 | 37.4% |
| chr1_1128658_A_T | chr1:1128658 | -0.446 | -0.208 | -0.576 | <0.001% |
| chr1_1124791_C_T | chr1:1124791 | 0.444 | 0.490 | 0.365 | 0.0026% |
| chr1_1128528_A_T | chr1:1128528 | 0.441 | 0.363 | 0.412 | <0.001% |
| chr1_1130410_G_A | chr1:1130410 | 0.418 | 0.325 | 0.341 | 0.0013% |
| chr1_1130329_T_A | chr1:1130329 | -0.416 | -0.468 | -0.541 | <0.001% |
| chr1_1122265_G_A | chr1:1122265 | -0.368 | -0.140 | -0.729 | 0.0059% |
| chr1_1133578_A_C | chr1:1133578 | -0.411 | -0.518 | -0.532 | 0.0013% |
| chr1_1123353_A_G | chr1:1123353 | 0.161 | 0.211 | 0.724 | <0.001% |
| chr1_1130411_G_A | chr1:1130411 | 0.409 | 0.412 | 0.400 | 0.157% |
| chr1_1124900_C_T | chr1:1124900 | 0.406 | 0.530 | 0.388 | 0.0013% |
| chr1_1128659_T_G | chr1:1128659 | -0.404 | -0.228 | -0.447 | <0.001% |
| chr1_1124887_G_C | chr1:1124887 | 0.401 | 0.475 | 0.588 | <0.001% |
| chr1_1130330_T_G | chr1:1130330 | -0.395 | -0.475 | -0.612 | <0.001% |
| chr1_1144208_G_A | chr1:1144208 | -0.281 | -0.141 | 0.694 | 0.011% |
| chr1_1133551_A_C | chr1:1133551 | -0.386 | -0.542 | -0.653 | <0.001% |
| chr1_1133546_G_A | chr1:1133546 | 0.386 | 0.365 | 0.535 | <0.001% |
| chr1_1133608_G_A | chr1:1133608 | -0.274 | -0.302 | -0.679 | <0.001% |
| chr1_1133507_G_C | chr1:1133507 | 0.003 | 0.185 | 0.676 | <0.001% |
| chr1_1130525_G_C | chr1:1130525 | -0.381 | -0.374 | -0.594 | 0.0020% |
| chr1_1122232_C_T | chr1:1122232 | 0.371 | 0.098 | 0.341 | 0.0013% |
| chr1_1128633_G_A | chr1:1128633 | -0.371 | -0.260 | -0.435 | 0.011% |
| chr1_1128715_T_G | chr1:1128715 | 0.351 | 0.241 | 0.259 | 0.0053% |
| chr1_1130308_G_T | chr1:1130308 | -0.350 | -0.420 | -0.500 | 0.0093% |
| chr1_1144574_G_A | chr1:1144574 | -0.035 | -0.076 | -0.606 | 0.0013% |
| chr1_1128650_G_A | chr1:1128650 | 0.341 | 0.307 | 0.259 | 0.0046% |
| chr1_1122291_G_A | chr1:1122291 | -0.085 | -0.076 | -0.600 | 0.0039% |
| chr1_1122305_G_T | chr1:1122305 | -0.002 | -0.010 | -0.600 | <0.001% |
| chr1_1125183_A_C | chr1:1125183 | 0.329 | 0.462 | 0.576 | <0.001% |
| chr1_1124849_C_G | chr1:1124849 | -0.314 | -0.259 | -0.400 | 0.018% |
| chr1_1124789_G_C | chr1:1124789 | 0.313 | 0.340 | 0.224 | 0.0026% |
| chr1_1130506_A_G | chr1:1130506 | -0.298 | -0.319 | -0.553 | <0.001% |
| chr1_1130488_G_A | chr1:1130488 | 0.309 | 0.280 | 0.435 | 0.0085% |
| chr1_1133483_T_C | chr1:1133483 | 0.202 | 0.310 | 0.541 | <0.001% |
| chr1_1130307_C_T | chr1:1130307 | 0.305 | 0.365 | 0.341 | 0.015% |
| chr1_1128620_G_A | chr1:1128620 | -0.303 | -0.223 | -0.494 | <0.001% |
| chr1_1124898_C_T | chr1:1124898 | 0.300 | 0.327 | 0.306 | <0.001% |
| chr1_1130450_C_T | chr1:1130450 | 0.290 | 0.348 | 0.529 | 0.0013% |
| chr1_1144207_C_T | chr1:1144207 | -0.295 | -0.174 | 0.318 | 0.0013% |
| chr1_1130354_G_A | chr1:1130354 | 0.295 | 0.346 | 0.394 | 0.0046% |
| chr1_1130472_C_G | chr1:1130472 | -0.295 | -0.303 | -0.418 | <0.001% |
| chr1_1133539_C_T | chr1:1133539 | -0.100 | -0.128 | -0.518 | 0.0059% |
| chr1_1133521_C_T | chr1:1133521 | 0.134 | 0.246 | 0.494 | 0.0013% |
| chr1_1124943_G_C | chr1:1124943 | -0.276 | -0.272 | -0.341 | 0.0072% |
| chr1_1130501_G_A | chr1:1130501 | -0.276 | -0.301 | -0.371 | <0.001% |
| chr1_1144634_T_C | chr1:1144634 | -0.087 | 0.001 | 0.488 | 0.0013% |
| chr1_1128705_C_T | chr1:1128705 | -0.275 | -0.104 | -0.071 | <0.001% |
| chr1_1133678_C_A | chr1:1133678 | 0.111 | 0.246 | 0.485 | <0.001% |
| chr1_1130293_G_A | chr1:1130293 | 0.274 | 0.223 | 0.241 | 0.0027% |
| chr1_1128583_C_T | chr1:1128583 | -0.270 | -0.091 | -0.318 | <0.001% |
| chr1_1130444_G_A | chr1:1130444 | -0.267 | -0.326 | -0.265 | 0.591% |
| chr1_1128673_C_T | chr1:1128673 | -0.266 | -0.184 | -0.165 | <0.001% |
| chr1_1133513_G_A | chr1:1133513 | 0.167 | 0.269 | 0.471 | 0.0013% |
| chr1_1128714_G_A | chr1:1128714 | -0.263 | -0.150 | -0.094 | 0.024% |
| chr1_1123279_G_A | chr1:1123279 | 0.255 | 0.165 | 0.459 | 0.0013% |
| chr1_1124830_G_A | chr1:1124830 | -0.196 | -0.261 | -0.459 | <0.001% |
| chr1_1133512_A_G | chr1:1133512 | -0.228 | -0.198 | -0.453 | 0.0013% |
| chr1_1133495_A_T | chr1:1133495 | -0.255 | -0.504 | -0.359 | <0.001% |
| chr1_1122357_G_A | chr1:1122357 | 0.020 | 0.124 | 0.447 | 0.0026% |
| chr1_1128643_G_A | chr1:1128643 | -0.253 | -0.221 | -0.141 | <0.001% |
| chr1_1128657_G_A | chr1:1128657 | -0.250 | -0.069 | -0.271 | <0.001% |
| chr1_1144284_C_G | chr1:1144284 | 0.250 | 0.115 | -0.124 | <0.001% |
| chr1_1144608_C_T | chr1:1144608 | 0.044 | 0.071 | 0.441 | 0.192% |
| chr1_1144649_G_A | chr1:1144649 | -0.030 | 0.034 | 0.441 | 0.0020% |
| chr1_1128510_A_G | chr1:1128510 | -0.248 | -0.255 | -0.129 | 0.0033% |
| chr1_1133524_C_T | chr1:1133524 | -0.115 | -0.198 | -0.435 | 0.0020% |
| chr1_1144625_C_T | chr1:1144625 | 0.044 | -0.039 | -0.435 | 0.0013% |
| chr1_1128460_T_C | chr1:1128460 | -0.245 | -0.261 | -0.294 | 0.0026% |
| chr1_1128632_C_G | chr1:1128632 | -0.245 | -0.099 | -0.282 | <0.001% |
| chr1_1128658_A_G | chr1:1128658 | -0.245 | 0.037 | -0.247 | <0.001% |
| chr1_1124883_C_G | chr1:1124883 | -0.241 | -0.421 | -0.306 | <0.001% |
| chr1_1130420_C_T | chr1:1130420 | 0.241 | 0.270 | 0.276 | 14.9% |
| chr1_1125251_G_A | chr1:1125251 | 0.240 | 0.490 | 0.271 | <0.001% |
| chr1_1128641_C_G | chr1:1128641 | -0.240 | -0.216 | -0.247 | <0.001% |
| chr1_1122345_C_G | chr1:1122345 | 0.238 | 0.119 | 0.271 | <0.001% |
| chr1_1122343_T_C | chr1:1122343 | -0.236 | -0.080 | -0.412 | <0.001% |
| chr1_1122225_C_G | chr1:1122225 | 0.023 | 0.075 | 0.412 | 0.011% |
| chr1_1128499_G_A | chr1:1128499 | 0.233 | 0.160 | 0.071 | <0.001% |
| chr1_1130394_T_C | chr1:1130394 | 0.231 | 0.364 | 0.335 | <0.001% |
| chr1_1130514_C_T | chr1:1130514 | 0.227 | 0.259 | 0.300 | <0.001% |
| chr1_1128713_C_T | chr1:1128713 | 0.225 | 0.194 | 0.129 | <0.001% |
| chr1_1128645_C_G | chr1:1128645 | -0.223 | -0.145 | -0.200 | 0.022% |
| chr1_1123337_C_G | chr1:1123337 | -0.221 | -0.150 | -0.153 | <0.001% |
| chr1_1124892_A_G | chr1:1124892 | -0.220 | -0.239 | -0.376 | <0.001% |
| chr1_1122269_G_C | chr1:1122269 | -0.153 | -0.061 | -0.376 | 0.140% |
| chr1_1122356_C_T | chr1:1122356 | -0.058 | -0.090 | -0.376 | 0.0013% |
| chr1_1133590_C_T | chr1:1133590 | -0.093 | -0.118 | -0.371 | <0.001% |
| chr1_1124964_C_T | chr1:1124964 | -0.208 | -0.195 | -0.212 | 0.0026% |
| chr1_1130285_G_A | chr1:1130285 | 0.207 | 0.246 | 0.224 | 0.015% |
| chr1_1125179_C_A | chr1:1125179 | -0.140 | -0.216 | -0.365 | <0.001% |
| chr1_1133496_C_A | chr1:1133496 | -0.205 | -0.357 | -0.241 | <0.001% |
| chr1_1133455_C_T | chr1:1133455 | 0.099 | 0.188 | 0.359 | 2.02% |
| chr1_1144642_A_G | chr1:1144642 | 0.130 | 0.018 | -0.353 | 0.0013% |
| chr1_1133469_G_A | chr1:1133469 | -0.095 | -0.121 | -0.341 | 0.0050% |
| chr1_1133584_C_T | chr1:1133584 | -0.088 | -0.190 | -0.341 | 0.0066% |
| chr1_1144648_C_T | chr1:1144648 | 0.057 | 0.006 | -0.341 | 0.0079% |
| chr1_1144654_G_A | chr1:1144654 | 0.003 | 0.003 | -0.341 | 0.030% |
| chr1_1144222_C_T | chr1:1144222 | -0.191 | -0.132 | 0.329 | <0.001% |
| chr1_1144454_G_C | chr1:1144454 | 0.017 | 0.056 | 0.335 | <0.001% |
| chr1_1128632_C_T | chr1:1128632 | -0.188 | -0.124 | -0.224 | <0.001% |
| chr1_1122346_G_A | chr1:1122346 | -0.048 | -0.061 | -0.329 | 0.0026% |
| chr1_1144589_T_G | chr1:1144589 | -0.042 | 0.009 | 0.329 | <0.001% |
| chr1_1129090_G_A | chr1:1129090 | 0.093 | 0.171 | 0.324 | 0.0033% |
| chr1_1128521_C_G | chr1:1128521 | -0.181 | -0.195 | 0.012 | 0.0026% |
| chr1_1130512_A_G | chr1:1130512 | -0.181 | -0.244 | -0.259 | <0.001% |
| chr1_1130511_C_T | chr1:1130511 | -0.181 | -0.142 | -0.306 | 0.0020% |
| chr1_1122298_G_A | chr1:1122298 | -0.037 | -0.003 | -0.318 | 0.0020% |
| chr1_1122335_C_G | chr1:1122335 | 0.073 | 0.025 | 0.318 | <0.001% |
| chr1_1125458_A_T | chr1:1125458 | -0.180 | -0.473 | -0.153 | 0.0013% |
| chr1_1128506_C_T | chr1:1128506 | 0.180 | 0.107 | 0.271 | 0.260% |
| chr1_1130448_C_T | chr1:1130448 | -0.180 | -0.223 | -0.141 | <0.001% |
| chr1_1130353_C_T | chr1:1130353 | -0.179 | -0.171 | -0.094 | 0.020% |
| chr1_1122290_C_T | chr1:1122290 | -0.131 | -0.025 | -0.306 | 0.0026% |
| chr1_1122312_G_A | chr1:1122312 | 0.171 | 0.038 | 0.306 | <0.001% |
| chr1_1122340_C_T | chr1:1122340 | 0.052 | -0.042 | -0.306 | 0.0013% |
| chr1_1130470_G_A | chr1:1130470 | -0.098 | -0.188 | -0.306 | <0.001% |
| chr1_1144169_C_A | chr1:1144169 | 0.048 | -0.014 | 0.306 | <0.001% |
| chr1_1128480_G_A | chr1:1128480 | -0.171 | -0.129 | -0.200 | 0.0033% |
| chr1_1133647_G_T | chr1:1133647 | 0.171 | 0.174 | 0.268 | <0.001% |
| chr1_1130315_G_C | chr1:1130315 | -0.170 | -0.244 | -0.212 | 0.0086% |
| chr1_1123368_G_C | chr1:1123368 | -0.168 | -0.091 | -0.094 | <0.001% |
| chr1_1130236_G_C | chr1:1130236 | -0.168 | -0.189 | -0.253 | <0.001% |
| chr1_1133653_C_T | chr1:1133653 | -0.128 | -0.157 | -0.297 | 0.0026% |
| chr1_1122331_C_T | chr1:1122331 | 0.015 | -0.003 | -0.294 | 0.0026% |
| chr1_1125252_C_T | chr1:1125252 | -0.123 | -0.259 | -0.294 | <0.001% |
| chr1_1133452_C_T | chr1:1133452 | 0.152 | 0.164 | 0.294 | 0.0020% |
| chr1_1130242_G_A | chr1:1130242 | 0.165 | 0.225 | 0.253 | 0.0014% |
| chr1_1130308_G_A | chr1:1130308 | -0.164 | -0.185 | -0.165 | 0.0053% |
| chr1_1130517_G_A | chr1:1130517 | -0.121 | -0.114 | -0.282 | <0.001% |
| chr1_1144226_T_C | chr1:1144226 | -0.038 | -0.010 | 0.282 | <0.001% |
| chr1_1123338_C_G | chr1:1123338 | -0.158 | -0.145 | -0.147 | <0.001% |
| chr1_1133570_G_A | chr1:1133570 | -0.068 | -0.127 | -0.279 | 0.0020% |
| chr1_1133534_G_A | chr1:1133534 | 0.157 | 0.157 | 0.112 | 0.0053% |
| chr1_1125596_C_A | chr1:1125596 | -0.118 | -0.319 | -0.276 | <0.001% |
| chr1_1144193_C_T | chr1:1144193 | -0.116 | -0.113 | 0.276 | 0.0026% |
| chr1_1125203_G_A | chr1:1125203 | 0.145 | 0.208 | 0.271 | <0.001% |
| chr1_1125594_A_C | chr1:1125594 | -0.123 | -0.368 | -0.271 | 0.0020% |
| chr1_1128987_C_T | chr1:1128987 | 0.150 | 0.246 | 0.106 | <0.001% |
| chr1_1144243_G_A | chr1:1144243 | -0.150 | -0.133 | -0.006 | 0.0033% |
| chr1_1123336_C_T | chr1:1123336 | -0.148 | -0.107 | -0.171 | <0.001% |
| chr1_1128650_G_T | chr1:1128650 | 0.148 | 0.051 | 0.200 | 0.0053% |
| chr1_1129140_G_C | chr1:1129140 | 0.148 | 0.218 | 0.165 | <0.001% |
| chr1_1125445_C_T | chr1:1125445 | -0.126 | -0.269 | -0.259 | 0.0013% |
| chr1_1128955_G_T | chr1:1128955 | 0.146 | 0.189 | 0.224 | <0.001% |
| chr1_1133431_C_T | chr1:1133431 | -0.079 | -0.119 | -0.259 | 0.0013% |
| chr1_1128476_C_A | chr1:1128476 | -0.145 | -0.147 | -0.153 | <0.001% |
| chr1_1144250_C_G | chr1:1144250 | -0.072 | -0.161 | 0.253 | 0.0013% |
| chr1_1144534_T_A | chr1:1144534 | -0.070 | -0.043 | -0.253 | 0.030% |
| chr1_1122332_G_A | chr1:1122332 | 0.043 | 0.037 | -0.247 | 0.514% |
| chr1_1124835_G_C | chr1:1124835 | -0.108 | -0.137 | -0.247 | 0.0013% |
| chr1_1129124_G_C | chr1:1129124 | 0.053 | 0.082 | 0.247 | <0.001% |
| chr1_1144228_G_C | chr1:1144228 | 0.140 | 0.102 | -0.065 | <0.001% |
| chr1_1125480_G_A | chr1:1125480 | -0.138 | -0.269 | -0.112 | 0.019% |
| chr1_1128528_A_G | chr1:1128528 | 0.138 | 0.096 | 0.059 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.