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SDF4
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SDF4
chr1:1,116,930..1,332,001, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_1122272_G_A | chr1:1122272 | -82,752 | -14,848 | -115,840 | 6.6e-6 |
| chr1_1122278_G_T | chr1:1122278 | -82,272 | -14,656 | -106,496 | 6.6e-6 |
| chr1_1122267_C_G | chr1:1122267 | -81,280 | -14,824 | -113,024 | 1.8e-4 |
| chr1_1122277_C_T | chr1:1122277 | -75,296 | -13,184 | -95,488 | 3.9e-5 |
| chr1_1128564_G_A | chr1:1128564 | -74,784 | -20,720 | -56,320 | 6.6e-6 |
| chr1_1128575_T_A | chr1:1128575 | 58,944 | 15,552 | 33,280 | 6.6e-6 |
| chr1_1124910_A_G | chr1:1124910 | -53,632 | -24,128 | -63,232 | 6.6e-6 |
| chr1_1122265_G_C | chr1:1122265 | -50,752 | -8,640 | -65,280 | 6.6e-6 |
| chr1_1124939_G_A | chr1:1124939 | -41,728 | -19,104 | -41,728 | 6.6e-6 |
| chr1_1122268_T_C | chr1:1122268 | -38,720 | -7,088 | -53,120 | 6.6e-6 |
| chr1_1122266_C_A | chr1:1122266 | -38,272 | -7,120 | -55,296 | 6.6e-6 |
| chr1_1128590_C_T | chr1:1128590 | -37,568 | -11,616 | -22,400 | 6.6e-6 |
| chr1_1124858_C_A | chr1:1124858 | -35,712 | -16,160 | -35,072 | 6.6e-6 |
| chr1_1122278_G_A | chr1:1122278 | -34,304 | -5,600 | -43,776 | 5.0e-4 |
| chr1_1124855_G_A | chr1:1124855 | -33,792 | -14,368 | -26,880 | 6.0e-2 |
| chr1_1133484_G_T | chr1:1133484 | 33,216 | 11,552 | 27,648 | 6.6e-6 |
| chr1_1124928_A_G | chr1:1124928 | -30,848 | -11,040 | -32,512 | 1.3e-5 |
| chr1_1124943_G_A | chr1:1124943 | 27,776 | 10,656 | 19,712 | 6.6e-6 |
| chr1_1130535_G_A | chr1:1130535 | -26,112 | -9,632 | -19,968 | 7.9e-5 |
| chr1_1130545_C_G | chr1:1130545 | -25,216 | -8,576 | -20,352 | 6.6e-6 |
| chr1_1124853_G_T | chr1:1124853 | -24,768 | -10,560 | -18,432 | 4.0e-3 |
| chr1_1133558_C_T | chr1:1133558 | 23,968 | 8,688 | 9,344 | 3.3e-5 |
| chr1_1128611_G_A | chr1:1128611 | 23,744 | 4,720 | 11,264 | 6.6e-6 |
| chr1_1128710_C_T | chr1:1128710 | 23,296 | 7,168 | 13,056 | 7.2e-5 |
| chr1_1130534_C_T | chr1:1130534 | 23,040 | 10,064 | 23,040 | 6.6e-6 |
| chr1_1128606_T_C | chr1:1128606 | 21,568 | 4,688 | 10,752 | 6.6e-6 |
| chr1_1130515_G_A | chr1:1130515 | -21,440 | -8,000 | -14,208 | 3.9e-5 |
| chr1_1133559_A_G | chr1:1133559 | -19,624 | -8,576 | -31,040 | 6.6e-6 |
| chr1_1128657_G_C | chr1:1128657 | -18,880 | -3,120 | -11,008 | 6.6e-6 |
| chr1_1133553_T_C | chr1:1133553 | -18,816 | -10,048 | -22,080 | 2.0e-5 |
| chr1_1130492_A_T | chr1:1130492 | -18,560 | -6,192 | -16,000 | 1.9e-4 |
| chr1_1133581_C_T | chr1:1133581 | 18,368 | 8,000 | 23,936 | 6.6e-6 |
| chr1_1124942_C_T | chr1:1124942 | -18,368 | -7,456 | -18,432 | 6.6e-6 |
| chr1_1133492_C_G | chr1:1133492 | -18,176 | -7,248 | -17,280 | 1.3e-5 |
| chr1_1133551_A_G | chr1:1133551 | -17,304 | -8,704 | -29,312 | 2.0e-5 |
| chr1_1124975_G_C | chr1:1124975 | -17,152 | -5,280 | -12,288 | 3.7e-1 |
| chr1_1128658_A_T | chr1:1128658 | -17,152 | -2,624 | -12,544 | 6.6e-6 |
| chr1_1124791_C_T | chr1:1124791 | 17,088 | 6,176 | 7,936 | 2.6e-5 |
| chr1_1128528_A_T | chr1:1128528 | 16,960 | 4,576 | 8,960 | 6.6e-6 |
| chr1_1130410_G_A | chr1:1130410 | 16,064 | 4,096 | 7,424 | 1.3e-5 |
| chr1_1130329_T_A | chr1:1130329 | -16,016 | -5,904 | -11,776 | 6.6e-6 |
| chr1_1133554_G_C | chr1:1133554 | -15,944 | -7,872 | -17,600 | 6.6e-6 |
| chr1_1133578_A_C | chr1:1133578 | -15,824 | -6,528 | -11,584 | 1.3e-5 |
| chr1_1130411_G_A | chr1:1130411 | 15,744 | 5,200 | 8,704 | 1.6e-3 |
| chr1_1124900_C_T | chr1:1124900 | 15,616 | 6,688 | 8,448 | 1.3e-5 |
| chr1_1128659_T_G | chr1:1128659 | -15,552 | -2,880 | -9,728 | 6.6e-6 |
| chr1_1124887_G_C | chr1:1124887 | 15,424 | 5,984 | 12,800 | 6.6e-6 |
| chr1_1130330_T_G | chr1:1130330 | -15,200 | -5,984 | -13,312 | 6.6e-6 |
| chr1_1133551_A_C | chr1:1133551 | -14,840 | -6,832 | -14,208 | 6.6e-6 |
| chr1_1133546_G_A | chr1:1133546 | 14,832 | 4,608 | 11,648 | 6.6e-6 |
| chr1_1122357_G_C | chr1:1122357 | 14,720 | 4,224 | 32,768 | 1.3e-5 |
| chr1_1130525_G_C | chr1:1130525 | -14,656 | -4,720 | -12,928 | 2.0e-5 |
| chr1_1122232_C_T | chr1:1122232 | 14,272 | 1,232 | 7,424 | 1.3e-5 |
| chr1_1128633_G_A | chr1:1128633 | -14,272 | -3,280 | -9,472 | 1.1e-4 |
| chr1_1122265_G_A | chr1:1122265 | -14,144 | -1,760 | -15,872 | 5.9e-5 |
| chr1_1122305_G_A | chr1:1122305 | -13,760 | -1,760 | -17,920 | 2.6e-5 |
| chr1_1133533_C_T | chr1:1133533 | 13,504 | 6,320 | 32,000 | 7.9e-5 |
| chr1_1128715_T_G | chr1:1128715 | 13,504 | 3,040 | 5,632 | 5.3e-5 |
| chr1_1130308_G_T | chr1:1130308 | -13,472 | -5,296 | -10,880 | 9.3e-5 |
| chr1_1133540_G_A | chr1:1133540 | -13,120 | -4,224 | -19,264 | 1.6e-4 |
| chr1_1128650_G_A | chr1:1128650 | 13,120 | 3,872 | 5,632 | 4.6e-5 |
| chr1_1133503_G_A | chr1:1133503 | -13,088 | -5,216 | -18,816 | 1.4e-1 |
| chr1_1125183_A_C | chr1:1125183 | 12,672 | 5,824 | 12,544 | 6.6e-6 |
| chr1_1133525_G_A | chr1:1133525 | 12,096 | 5,200 | 19,328 | 2.6e-5 |
| chr1_1124849_C_G | chr1:1124849 | -12,096 | -3,264 | -8,704 | 1.8e-4 |
| chr1_1124789_G_C | chr1:1124789 | 12,032 | 4,288 | 4,864 | 2.6e-5 |
| chr1_1130488_G_A | chr1:1130488 | 11,904 | 3,536 | 9,472 | 8.5e-5 |
| chr1_1130307_C_T | chr1:1130307 | 11,744 | 4,608 | 7,424 | 1.5e-4 |
| chr1_1128620_G_A | chr1:1128620 | -11,648 | -2,816 | -10,752 | 6.6e-6 |
| chr1_1124898_C_T | chr1:1124898 | 11,520 | 4,128 | 6,656 | 6.6e-6 |
| chr1_1130506_A_G | chr1:1130506 | -11,456 | -4,016 | -12,032 | 6.6e-6 |
| chr1_1144207_C_T | chr1:1144207 | -11,360 | -2,192 | 6,912 | 1.3e-5 |
| chr1_1130354_G_A | chr1:1130354 | 11,328 | 4,368 | 8,576 | 4.6e-5 |
| chr1_1130472_C_G | chr1:1130472 | -11,328 | -3,824 | -9,088 | 6.6e-6 |
| chr1_1130450_C_T | chr1:1130450 | 11,168 | 4,384 | 11,520 | 1.3e-5 |
| chr1_1144208_G_A | chr1:1144208 | -10,816 | -1,776 | 15,104 | 1.1e-4 |
| chr1_1124943_G_C | chr1:1124943 | -10,624 | -3,424 | -7,424 | 7.2e-5 |
| chr1_1130501_G_A | chr1:1130501 | -10,624 | -3,792 | -8,064 | 6.6e-6 |
| chr1_1128705_C_T | chr1:1128705 | -10,560 | -1,312 | -1,536 | 6.6e-6 |
| chr1_1133608_G_A | chr1:1133608 | -10,556 | -3,808 | -14,784 | 6.6e-6 |
| chr1_1130293_G_A | chr1:1130293 | 10,528 | 2,816 | 5,248 | 2.7e-5 |
| chr1_1128583_C_T | chr1:1128583 | -10,368 | -1,152 | -6,912 | 6.6e-6 |
| chr1_1130444_G_A | chr1:1130444 | -10,272 | -4,112 | -5,760 | 5.9e-3 |
| chr1_1128673_C_T | chr1:1128673 | -10,240 | -2,320 | -3,584 | 6.6e-6 |
| chr1_1128714_G_A | chr1:1128714 | -10,112 | -1,888 | -2,048 | 2.4e-4 |
| chr1_1123279_G_A | chr1:1123279 | 9,792 | 2,080 | 9,984 | 1.3e-5 |
| chr1_1133495_A_T | chr1:1133495 | -9,792 | -6,352 | -7,808 | 6.6e-6 |
| chr1_1128643_G_A | chr1:1128643 | -9,728 | -2,784 | -3,072 | 6.6e-6 |
| chr1_1133540_G_T | chr1:1133540 | -9,712 | -3,840 | -19,968 | 6.6e-6 |
| chr1_1128657_G_A | chr1:1128657 | -9,600 | -864 | -5,888 | 6.6e-6 |
| chr1_1144284_C_G | chr1:1144284 | 9,600 | 1,456 | -2,688 | 6.6e-6 |
| chr1_1128510_A_G | chr1:1128510 | -9,536 | -3,216 | -2,816 | 3.3e-5 |
| chr1_1128460_T_C | chr1:1128460 | -9,408 | -3,296 | -6,400 | 2.6e-5 |
| chr1_1128632_C_G | chr1:1128632 | -9,408 | -1,248 | -6,144 | 6.6e-6 |
| chr1_1128658_A_G | chr1:1128658 | -9,408 | 464 | -5,376 | 6.6e-6 |
| chr1_1124883_C_G | chr1:1124883 | -9,280 | -5,312 | -6,656 | 6.6e-6 |
| chr1_1130420_C_T | chr1:1130420 | 9,280 | 3,408 | 6,016 | 1.5e-1 |
| chr1_1125251_G_A | chr1:1125251 | 9,216 | 6,176 | 5,888 | 6.6e-6 |
| chr1_1128641_C_G | chr1:1128641 | -9,216 | -2,720 | -5,376 | 6.6e-6 |
| chr1_1122345_C_G | chr1:1122345 | 9,152 | 1,504 | 5,888 | 6.6e-6 |
| chr1_1122343_T_C | chr1:1122343 | -9,088 | -1,008 | -8,960 | 6.6e-6 |
| chr1_1128499_G_A | chr1:1128499 | 8,960 | 2,016 | 1,536 | 6.6e-6 |
| chr1_1130394_T_C | chr1:1130394 | 8,896 | 4,592 | 7,296 | 6.6e-6 |
| chr1_1133512_A_G | chr1:1133512 | -8,768 | -2,496 | -9,856 | 1.3e-5 |
| chr1_1130514_C_T | chr1:1130514 | 8,736 | 3,264 | 6,528 | 6.6e-6 |
| chr1_1128713_C_T | chr1:1128713 | 8,640 | 2,448 | 2,816 | 6.6e-6 |
| chr1_1128645_C_G | chr1:1128645 | -8,576 | -1,824 | -4,352 | 2.2e-4 |
| chr1_1123337_C_G | chr1:1123337 | -8,512 | -1,888 | -3,328 | 6.6e-6 |
| chr1_1124892_A_G | chr1:1124892 | -8,448 | -3,008 | -8,192 | 6.6e-6 |
| chr1_1124964_C_T | chr1:1124964 | -8,000 | -2,464 | -4,608 | 2.6e-5 |
| chr1_1130285_G_A | chr1:1130285 | 7,968 | 3,104 | 4,864 | 1.5e-4 |
| chr1_1133496_C_A | chr1:1133496 | -7,872 | -4,496 | -5,248 | 6.6e-6 |
| chr1_1133483_T_C | chr1:1133483 | 7,776 | 3,904 | 11,776 | 6.6e-6 |
| chr1_1124830_G_A | chr1:1124830 | -7,552 | -3,296 | -9,984 | 6.6e-6 |
| chr1_1144222_C_T | chr1:1144222 | -7,328 | -1,664 | 7,168 | 6.6e-6 |
| chr1_1128632_C_T | chr1:1128632 | -7,232 | -1,568 | -4,864 | 6.6e-6 |
| chr1_1128521_C_G | chr1:1128521 | -6,976 | -2,464 | 256 | 2.6e-5 |
| chr1_1130512_A_G | chr1:1130512 | -6,976 | -3,072 | -5,632 | 6.6e-6 |
| chr1_1130511_C_T | chr1:1130511 | -6,944 | -1,792 | -6,656 | 2.0e-5 |
| chr1_1125458_A_T | chr1:1125458 | -6,912 | -5,968 | -3,328 | 1.3e-5 |
| chr1_1128506_C_T | chr1:1128506 | 6,912 | 1,344 | 5,888 | 2.6e-3 |
| chr1_1130448_C_T | chr1:1130448 | -6,912 | -2,816 | -3,072 | 6.6e-6 |
| chr1_1130353_C_T | chr1:1130353 | -6,880 | -2,160 | -2,048 | 2.0e-4 |
| chr1_1122312_G_A | chr1:1122312 | 6,592 | 480 | 6,656 | 6.6e-6 |
| chr1_1128480_G_A | chr1:1128480 | -6,592 | -1,632 | -4,352 | 3.3e-5 |
| chr1_1133647_G_T | chr1:1133647 | 6,566 | 2,192 | 5,824 | 6.6e-6 |
| chr1_1130315_G_C | chr1:1130315 | -6,528 | -3,072 | -4,608 | 8.6e-5 |
| chr1_1123368_G_C | chr1:1123368 | -6,464 | -1,152 | -2,048 | 6.6e-6 |
| chr1_1130236_G_C | chr1:1130236 | -6,464 | -2,384 | -5,504 | 7.2e-6 |
| chr1_1133513_G_A | chr1:1133513 | 6,416 | 3,392 | 10,240 | 1.3e-5 |
| chr1_1130242_G_A | chr1:1130242 | 6,336 | 2,832 | 5,504 | 1.4e-5 |
| chr1_1130308_G_A | chr1:1130308 | -6,304 | -2,336 | -3,584 | 5.3e-5 |
| chr1_1123353_A_G | chr1:1123353 | 6,208 | 2,656 | 15,744 | 6.6e-6 |
| chr1_1123338_C_G | chr1:1123338 | -6,080 | -1,824 | -3,200 | 6.6e-6 |
| chr1_1133534_G_A | chr1:1133534 | 6,032 | 1,984 | 2,432 | 5.3e-5 |
| chr1_1122269_G_C | chr1:1122269 | -5,888 | -768 | -8,192 | 1.4e-3 |
| chr1_1133452_C_T | chr1:1133452 | 5,856 | 2,064 | 6,400 | 2.0e-5 |
| chr1_1128987_C_T | chr1:1128987 | 5,760 | 3,104 | 2,304 | 6.6e-6 |
| chr1_1144243_G_A | chr1:1144243 | -5,760 | -1,680 | -128 | 3.3e-5 |
| chr1_1123336_C_T | chr1:1123336 | -5,696 | -1,344 | -3,712 | 6.6e-6 |
| chr1_1128650_G_T | chr1:1128650 | 5,696 | 640 | 4,352 | 5.3e-5 |
| chr1_1129140_G_C | chr1:1129140 | 5,696 | 2,752 | 3,584 | 6.6e-6 |
| chr1_1128955_G_T | chr1:1128955 | 5,632 | 2,384 | 4,864 | 6.6e-6 |
| chr1_1125203_G_A | chr1:1125203 | 5,568 | 2,624 | 5,888 | 6.6e-6 |
| chr1_1128476_C_A | chr1:1128476 | -5,568 | -1,856 | -3,328 | 6.6e-6 |
| chr1_1125179_C_A | chr1:1125179 | -5,376 | -2,720 | -7,936 | 6.6e-6 |
| chr1_1144228_G_C | chr1:1144228 | 5,376 | 1,280 | -1,408 | 6.6e-6 |
| chr1_1125480_G_A | chr1:1125480 | -5,312 | -3,392 | -2,432 | 1.9e-4 |
| chr1_1128528_A_G | chr1:1128528 | 5,312 | 1,216 | 1,280 | 6.6e-6 |
| chr1_1133530_G_A | chr1:1133530 | 5,184 | 3,472 | 17,792 | 1.3e-5 |
| chr1_1133521_C_T | chr1:1133521 | 5,136 | 3,104 | 10,752 | 1.3e-5 |
| chr1_1144637_G_T | chr1:1144637 | 5,056 | -1,112 | -34,176 | 6.6e-6 |
| chr1_1122290_C_T | chr1:1122290 | -5,056 | -320 | -6,656 | 2.6e-5 |
| chr1_1144642_A_G | chr1:1144642 | 4,992 | 224 | -7,680 | 1.3e-5 |
| chr1_1133653_C_T | chr1:1133653 | -4,930 | -1,984 | -6,464 | 2.6e-5 |
| chr1_1125445_C_T | chr1:1125445 | -4,864 | -3,392 | -5,632 | 1.3e-5 |
| chr1_1125252_C_T | chr1:1125252 | -4,736 | -3,264 | -6,400 | 6.6e-6 |
| chr1_1125594_A_C | chr1:1125594 | -4,736 | -4,640 | -5,888 | 2.0e-5 |
| chr1_1130517_G_A | chr1:1130517 | -4,672 | -1,440 | -6,144 | 6.6e-6 |
| chr1_1125596_C_A | chr1:1125596 | -4,544 | -4,016 | -6,016 | 6.6e-6 |
| chr1_1144193_C_T | chr1:1144193 | -4,480 | -1,424 | 6,016 | 2.6e-5 |
| chr1_1133524_C_T | chr1:1133524 | -4,416 | -2,496 | -9,472 | 2.0e-5 |
| chr1_1133678_C_A | chr1:1133678 | 4,276 | 3,104 | 10,560 | 6.6e-6 |
| chr1_1124835_G_C | chr1:1124835 | -4,160 | -1,728 | -5,376 | 1.3e-5 |
| chr1_1133539_C_T | chr1:1133539 | -3,856 | -1,616 | -11,264 | 5.9e-5 |
| chr1_1133455_C_T | chr1:1133455 | 3,808 | 2,368 | 7,808 | 2.0e-2 |
| chr1_1130470_G_A | chr1:1130470 | -3,776 | -2,368 | -6,656 | 6.6e-6 |
| chr1_1133469_G_A | chr1:1133469 | -3,648 | -1,520 | -7,424 | 5.0e-5 |
| chr1_1129090_G_A | chr1:1129090 | 3,584 | 2,160 | 7,040 | 3.3e-5 |
| chr1_1133590_C_T | chr1:1133590 | -3,560 | -1,488 | -8,064 | 6.6e-6 |
| chr1_1133584_C_T | chr1:1133584 | -3,400 | -2,400 | -7,424 | 6.6e-5 |
| chr1_1144634_T_C | chr1:1144634 | -3,328 | 16 | 10,624 | 1.3e-5 |
| chr1_1122291_G_A | chr1:1122291 | -3,264 | -960 | -13,056 | 3.9e-5 |
| chr1_1133431_C_T | chr1:1133431 | -3,040 | -1,504 | -5,632 | 1.3e-5 |
| chr1_1122335_C_G | chr1:1122335 | 2,816 | 320 | 6,912 | 6.6e-6 |
| chr1_1144250_C_G | chr1:1144250 | -2,752 | -2,032 | 5,504 | 1.3e-5 |
| chr1_1144534_T_A | chr1:1144534 | -2,688 | -544 | -5,504 | 3.0e-4 |
| chr1_1133570_G_A | chr1:1133570 | -2,624 | -1,600 | -6,080 | 2.0e-5 |
| chr1_1122356_C_T | chr1:1122356 | -2,240 | -1,136 | -8,192 | 1.3e-5 |
| chr1_1144648_C_T | chr1:1144648 | 2,176 | 80 | -7,424 | 7.9e-5 |
| chr1_1144631_G_A | chr1:1144631 | 2,048 | 2,016 | 18,688 | 7.9e-5 |
| chr1_1129124_G_C | chr1:1129124 | 2,048 | 1,040 | 5,376 | 6.6e-6 |
| chr1_1122340_C_T | chr1:1122340 | 1,984 | -528 | -6,656 | 1.3e-5 |
| chr1_1122346_G_A | chr1:1122346 | -1,856 | -768 | -7,168 | 2.6e-5 |
| chr1_1144169_C_A | chr1:1144169 | 1,856 | -176 | 6,656 | 6.6e-6 |
| chr1_1144608_C_T | chr1:1144608 | 1,696 | 896 | 9,600 | 1.9e-3 |
| chr1_1144625_C_T | chr1:1144625 | 1,696 | -496 | -9,472 | 1.3e-5 |
| chr1_1122332_G_A | chr1:1122332 | 1,664 | 464 | -5,376 | 5.1e-3 |
| chr1_1144589_T_G | chr1:1144589 | -1,632 | 112 | 7,168 | 6.6e-6 |
| chr1_1144226_T_C | chr1:1144226 | -1,472 | -128 | 6,144 | 6.6e-6 |
| chr1_1122298_G_A | chr1:1122298 | -1,408 | -32 | -6,912 | 2.0e-5 |
| chr1_1144574_G_A | chr1:1144574 | -1,344 | -960 | -13,184 | 1.3e-5 |
| chr1_1144649_G_A | chr1:1144649 | -1,152 | 432 | 9,600 | 2.0e-5 |
| chr1_1122225_C_G | chr1:1122225 | 896 | 944 | 8,960 | 1.1e-4 |
| chr1_1122357_G_A | chr1:1122357 | 768 | 1,568 | 9,728 | 2.6e-5 |
| chr1_1144454_G_C | chr1:1144454 | 640 | 704 | 7,296 | 6.6e-6 |
| chr1_1122331_C_T | chr1:1122331 | 576 | -32 | -6,400 | 2.6e-5 |
| chr1_1133507_G_C | chr1:1133507 | 128 | 2,336 | 14,720 | 6.6e-6 |
| chr1_1144654_G_A | chr1:1144654 | 128 | 32 | -7,424 | 3.0e-4 |
| chr1_1122305_G_T | chr1:1122305 | -64 | -128 | -13,056 | 6.6e-6 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.