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SETD9
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SETD9
chr5:56,809,259..57,028,899, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_56814972_C_G | chr5:56814972 | 19,968 | -552 | 3,840 | — |
| chr5_56815015_C_G | chr5:56815015 | 13,696 | 2,464 | 7,808 | 6.6e-6 |
| chr5_56814969_G_A | chr5:56814969 | 13,376 | -64 | 8,448 | — |
| chr5_56814932_T_G | chr5:56814932 | -11,648 | -7,888 | -42,624 | — |
| chr5_56815221_A_G | chr5:56815221 | 11,392 | -2,320 | 3,840 | — |
| chr5_56815222_C_T | chr5:56815222 | 11,264 | -1,240 | 12,416 | 6.6e-6 |
| chr5_56814932_T_C | chr5:56814932 | -10,368 | -7,864 | -42,752 | — |
| chr5_56814956_C_T | chr5:56814956 | 10,112 | 184 | 0 | 3.9e-5 |
| chr5_56814937_T_G | chr5:56814937 | -9,984 | -6,800 | -41,984 | — |
| chr5_56815213_C_G | chr5:56815213 | 9,984 | 1,240 | 11,264 | — |
| chr5_56815224_T_C | chr5:56815224 | 9,728 | -1,944 | -256 | 9.2e-5 |
| chr5_56814933_T_G | chr5:56814933 | -9,664 | -7,160 | -41,216 | — |
| chr5_56814935_G_C | chr5:56814935 | -9,600 | -6,456 | -36,352 | — |
| chr5_56814929_G_A | chr5:56814929 | 9,408 | 2,192 | 13,312 | — |
| chr5_56814937_T_C | chr5:56814937 | -9,344 | -6,304 | -38,400 | — |
| chr5_56815222_C_A | chr5:56815222 | 9,344 | -1,112 | 6,784 | — |
| chr5_56814930_C_A | chr5:56814930 | -9,152 | -6,112 | -36,992 | — |
| chr5_56814971_G_C | chr5:56814971 | 9,024 | -200 | 3,328 | — |
| chr5_56814956_C_G | chr5:56814956 | 8,896 | -40 | -1,152 | — |
| chr5_56815224_T_A | chr5:56815224 | 8,832 | -1,752 | 5,888 | — |
| chr5_56814933_T_A | chr5:56814933 | -8,768 | -6,992 | -44,288 | — |
| chr5_56814933_T_C | chr5:56814933 | -8,704 | -5,352 | -31,104 | — |
| chr5_56814951_C_G | chr5:56814951 | -8,704 | -1,640 | -6,784 | — |
| chr5_56814938_T_G | chr5:56814938 | -8,576 | -6,952 | -39,680 | — |
| chr5_56815220_T_C | chr5:56815220 | -8,448 | -3,088 | -16,512 | — |
| chr5_56814934_C_A | chr5:56814934 | -8,384 | -7,288 | -41,856 | 4.6e-4 |
| chr5_56814934_C_T | chr5:56814934 | -8,256 | -6,552 | -37,504 | — |
| chr5_56815222_C_G | chr5:56815222 | 8,192 | -1,976 | 3,840 | — |
| chr5_56814930_C_T | chr5:56814930 | -8,128 | -5,496 | -31,616 | — |
| chr5_56814938_T_C | chr5:56814938 | -8,064 | -5,936 | -35,328 | — |
| chr5_56814934_C_G | chr5:56814934 | -7,936 | -7,296 | -39,552 | 6.6e-6 |
| chr5_56814929_G_T | chr5:56814929 | -7,872 | -3,488 | -24,448 | — |
| chr5_56814927_T_C | chr5:56814927 | 7,872 | 192 | -3,968 | — |
| chr5_56814932_T_A | chr5:56814932 | -7,744 | -8,048 | -40,576 | — |
| chr5_56814937_T_A | chr5:56814937 | -7,744 | -5,600 | -33,280 | — |
| chr5_56814935_G_T | chr5:56814935 | -7,680 | -5,064 | -30,464 | — |
| chr5_56814939_T_A | chr5:56814939 | -7,552 | -5,896 | -33,152 | — |
| chr5_56814939_T_G | chr5:56814939 | -7,424 | -6,104 | -32,384 | — |
| chr5_56814931_T_G | chr5:56814931 | -7,296 | -7,016 | -39,936 | — |
| chr5_56815135_C_A | chr5:56815135 | 7,168 | 544 | 3,072 | — |
| chr5_56815204_C_G | chr5:56815204 | 7,168 | -744 | -2,560 | — |
| chr5_56814931_T_C | chr5:56814931 | -7,040 | -6,920 | -39,936 | — |
| chr5_56814953_G_C | chr5:56814953 | 7,040 | -648 | 1,920 | — |
| chr5_56815170_C_G | chr5:56815170 | -7,040 | -944 | 896 | — |
| chr5_56815024_G_T | chr5:56815024 | 6,784 | 832 | 6,144 | — |
| chr5_56815177_G_T | chr5:56815177 | -6,656 | -832 | -2,304 | — |
| chr5_56814956_C_A | chr5:56814956 | 6,592 | 720 | 6,784 | — |
| chr5_56815003_C_A | chr5:56815003 | 6,464 | 1,584 | 6,016 | — |
| chr5_56814931_T_A | chr5:56814931 | -6,400 | -7,024 | -39,296 | — |
| chr5_56814939_T_C | chr5:56814939 | -6,400 | -2,528 | -13,952 | — |
| chr5_56814938_T_A | chr5:56814938 | -6,336 | -5,224 | -31,104 | — |
| chr5_56815200_G_A | chr5:56815200 | 6,272 | 1,048 | 4,608 | 2.6e-5 |
| chr5_56814959_G_A | chr5:56814959 | 6,144 | -8 | -512 | — |
| chr5_56814961_C_G | chr5:56814961 | -6,080 | -104 | -1,408 | — |
| chr5_56815225_G_A | chr5:56815225 | 6,016 | -328 | 7,168 | — |
| chr5_56815208_T_C | chr5:56815208 | 6,016 | -904 | -5,120 | — |
| chr5_56814945_A_T | chr5:56814945 | 5,952 | 152 | 2,048 | — |
| chr5_56814928_T_G | chr5:56814928 | -5,760 | -3,392 | -16,512 | — |
| chr5_56815223_C_T | chr5:56815223 | 5,760 | -1,136 | 8,576 | — |
| chr5_56814929_G_C | chr5:56814929 | -5,504 | -1,720 | -17,664 | 6.6e-6 |
| chr5_56815192_C_A | chr5:56815192 | -5,504 | -728 | -3,456 | 2.0e-5 |
| chr5_56815193_T_G | chr5:56815193 | 5,376 | -1,096 | -6,144 | — |
| chr5_56814990_C_G | chr5:56814990 | 5,376 | 336 | -384 | — |
| chr5_56815004_C_G | chr5:56815004 | 5,376 | -424 | 3,456 | 2.0e-5 |
| chr5_56815224_T_G | chr5:56815224 | 5,376 | -2,184 | -640 | 2.6e-5 |
| chr5_56815111_A_T | chr5:56815111 | 5,312 | -384 | 3,456 | — |
| chr5_56815168_A_T | chr5:56815168 | -5,248 | -1,608 | -5,120 | — |
| chr5_56814979_G_T | chr5:56814979 | 5,120 | 408 | -3,712 | — |
| chr5_56815221_A_T | chr5:56815221 | 4,992 | -792 | 9,600 | — |
| chr5_56815192_C_G | chr5:56815192 | -4,992 | -808 | -1,664 | — |
| chr5_56815225_G_C | chr5:56815225 | 4,864 | -1,104 | 6,144 | — |
| chr5_56815211_G_A | chr5:56815211 | 4,864 | 664 | 1,536 | — |
| chr5_56815001_T_A | chr5:56815001 | -4,608 | 192 | 2,560 | — |
| chr5_56815165_G_A | chr5:56815165 | -4,608 | -1,088 | -2,048 | — |
| chr5_56815164_A_C | chr5:56815164 | 4,480 | 800 | 1,664 | — |
| chr5_56815188_A_T | chr5:56815188 | 4,480 | 272 | 2,560 | — |
| chr5_56815196_T_G | chr5:56815196 | 4,480 | -360 | -3,328 | — |
| chr5_56814968_T_C | chr5:56814968 | 4,416 | -720 | 11,136 | — |
| chr5_56815217_G_A | chr5:56815217 | 4,352 | 2,272 | 9,344 | 6.6e-6 |
| chr5_56814957_C_A | chr5:56814957 | 4,352 | 136 | -640 | — |
| chr5_56814971_G_T | chr5:56814971 | 4,352 | 32 | 2,048 | — |
| chr5_56815130_G_C | chr5:56815130 | 4,352 | 880 | 256 | 6.6e-6 |
| chr5_56815173_C_G | chr5:56815173 | -4,352 | -336 | 640 | — |
| chr5_56814985_C_G | chr5:56814985 | -4,288 | 88 | 3,456 | — |
| chr5_56815180_C_A | chr5:56815180 | -4,224 | -440 | 0 | 7.7e-4 |
| chr5_56815192_C_T | chr5:56815192 | -4,224 | -64 | -640 | 8.5e-5 |
| chr5_56815198_C_T | chr5:56815198 | -4,224 | -344 | 1,152 | — |
| chr5_56815220_T_G | chr5:56815220 | 4,224 | -1,400 | -640 | — |
| chr5_56815012_C_A | chr5:56815012 | 4,160 | -96 | -2,176 | — |
| chr5_56815215_G_T | chr5:56815215 | 4,096 | 864 | 8,704 | — |
| chr5_56815004_C_A | chr5:56815004 | 4,032 | 352 | 3,072 | — |
| chr5_56815228_G_A | chr5:56815228 | 3,904 | 456 | 5,376 | 1.3e-5 |
| chr5_56815206_G_A | chr5:56815206 | 3,712 | 136 | 5,248 | — |
| chr5_56815225_G_T | chr5:56815225 | 3,584 | -536 | 6,400 | — |
| chr5_56815083_C_G | chr5:56815083 | 3,584 | -32 | 4,096 | — |
| chr5_56815206_G_T | chr5:56815206 | 3,584 | 200 | 4,096 | — |
| chr5_56814983_G_T | chr5:56814983 | -3,456 | -1,760 | -9,088 | — |
| chr5_56815003_C_G | chr5:56815003 | 3,456 | 376 | 4,864 | — |
| chr5_56814966_C_G | chr5:56814966 | 3,328 | -904 | 9,088 | — |
| chr5_56815217_G_C | chr5:56815217 | 3,328 | -464 | -4,096 | — |
| chr5_56815014_A_T | chr5:56815014 | 3,136 | -208 | -3,968 | — |
| chr5_56814944_C_A | chr5:56814944 | -3,072 | -624 | -7,552 | — |
| chr5_56815216_G_T | chr5:56815216 | 3,072 | 840 | 4,736 | — |
| chr5_56815113_G_C | chr5:56815113 | 3,072 | -88 | 4,224 | — |
| chr5_56815128_C_A | chr5:56815128 | 3,008 | 176 | 6,016 | — |
| chr5_56815218_A_G | chr5:56815218 | -2,944 | -712 | -6,272 | — |
| chr5_56815196_T_C | chr5:56815196 | 2,944 | -712 | -5,376 | — |
| chr5_56815205_C_A | chr5:56815205 | -2,816 | 1,856 | 4,352 | — |
| chr5_56815230_C_G | chr5:56815230 | 2,816 | 688 | 4,352 | — |
| chr5_56814936_C_G | chr5:56814936 | 2,752 | 1,296 | 7,040 | — |
| chr5_56814928_T_C | chr5:56814928 | -2,752 | -1,160 | -4,608 | — |
| chr5_56814598_C_T | chr5:56814598 | 2,688 | 960 | 5,888 | 2.1e-4 |
| chr5_56814951_C_T | chr5:56814951 | -2,688 | -576 | -4,736 | — |
| chr5_56814968_T_A | chr5:56814968 | 2,624 | 96 | 11,264 | — |
| chr5_56814943_G_T | chr5:56814943 | -2,624 | 56 | -4,352 | — |
| chr5_56814946_G_C | chr5:56814946 | 2,496 | -96 | 9,472 | 6.6e-6 |
| chr5_56815014_A_C | chr5:56815014 | -2,496 | -1,176 | -7,424 | — |
| chr5_56815223_C_A | chr5:56815223 | 2,432 | -1,432 | 18,944 | — |
| chr5_56814965_A_G | chr5:56814965 | 2,432 | -1,208 | 10,880 | 2.6e-5 |
| chr5_56814959_G_T | chr5:56814959 | 2,432 | 536 | 6,528 | — |
| chr5_56815207_G_T | chr5:56815207 | 2,432 | 336 | 4,736 | — |
| chr5_56815148_G_T | chr5:56815148 | 2,432 | 784 | 4,480 | — |
| chr5_56815209_G_C | chr5:56815209 | 2,432 | -48 | 3,968 | — |
| chr5_56814479_C_T | chr5:56814479 | 2,368 | 1,152 | 4,864 | 6.6e-6 |
| chr5_56814915_C_A | chr5:56814915 | -2,304 | -352 | -6,400 | 1.8e-3 |
| chr5_56814882_A_C | chr5:56814882 | 2,304 | 496 | -4,096 | 2.4e-4 |
| chr5_56815123_C_A | chr5:56815123 | -2,304 | 144 | -4,096 | — |
| chr5_56815184_C_T | chr5:56815184 | 2,304 | 512 | 4,096 | — |
| chr5_56814969_G_T | chr5:56814969 | -2,240 | 280 | 7,808 | — |
| chr5_56814994_G_C | chr5:56814994 | -2,176 | 840 | -6,528 | — |
| chr5_56815219_C_A | chr5:56815219 | 2,176 | 456 | 5,888 | — |
| chr5_56814948_C_T | chr5:56814948 | 1,920 | 8 | -9,216 | — |
| chr5_56815126_T_C | chr5:56815126 | -1,856 | 560 | -5,632 | — |
| chr5_56815223_C_G | chr5:56815223 | 1,792 | -880 | 14,848 | — |
| chr5_56815189_A_T | chr5:56815189 | 1,792 | 928 | 9,984 | 6.6e-6 |
| chr5_56815205_C_T | chr5:56815205 | 1,792 | 384 | 4,096 | — |
| chr5_56814967_C_T | chr5:56814967 | -1,728 | 80 | 6,784 | — |
| chr5_56814927_T_G | chr5:56814927 | -1,728 | -992 | -4,864 | — |
| chr5_56814940_G_A | chr5:56814940 | -1,664 | -1,120 | -7,552 | — |
| chr5_56815183_C_T | chr5:56815183 | -1,664 | 408 | 5,632 | 6.6e-6 |
| chr5_56815168_A_G | chr5:56815168 | 1,664 | -1,104 | -3,968 | 1.3e-5 |
| chr5_56814968_T_G | chr5:56814968 | 1,600 | -656 | 9,600 | — |
| chr5_56814965_A_C | chr5:56814965 | 1,536 | -2,344 | 5,120 | — |
| chr5_56815209_G_A | chr5:56815209 | -1,536 | 488 | 4,736 | — |
| chr5_56815063_C_G | chr5:56815063 | 1,536 | 232 | 3,968 | — |
| chr5_56814926_C_A | chr5:56814926 | -1,472 | -1,024 | -4,224 | — |
| chr5_56815181_T_C | chr5:56815181 | -1,408 | -360 | -5,248 | 2.0e-5 |
| chr5_56815228_G_T | chr5:56815228 | 1,408 | 464 | 4,736 | — |
| chr5_56814998_G_T | chr5:56814998 | 1,408 | 640 | 4,224 | — |
| chr5_56814989_T_G | chr5:56814989 | 1,408 | 280 | 3,968 | — |
| chr5_56815114_G_A | chr5:56815114 | -1,344 | -968 | -5,248 | — |
| chr5_56814964_C_G | chr5:56814964 | 1,280 | -296 | 10,496 | — |
| chr5_56815210_C_A | chr5:56815210 | 1,280 | 808 | 9,216 | — |
| chr5_56814966_C_A | chr5:56814966 | 1,280 | -208 | 7,552 | — |
| chr5_56814975_C_G | chr5:56814975 | -1,280 | 736 | 5,376 | — |
| chr5_56815210_C_G | chr5:56815210 | 1,280 | 384 | 4,096 | — |
| chr5_56814973_G_C | chr5:56814973 | -1,216 | 432 | 4,224 | — |
| chr5_56814969_G_C | chr5:56814969 | 1,152 | 312 | 8,704 | — |
| chr5_56815213_C_A | chr5:56815213 | 1,152 | 680 | 6,016 | — |
| chr5_56814927_T_A | chr5:56814927 | -1,152 | -2,016 | -5,504 | — |
| chr5_56814944_C_G | chr5:56814944 | -1,152 | -464 | -4,608 | — |
| chr5_56815213_C_T | chr5:56815213 | 1,152 | 952 | 4,224 | — |
| chr5_56814598_C_G | chr5:56814598 | 1,152 | 512 | 4,096 | 6.6e-6 |
| chr5_56814972_C_T | chr5:56814972 | 1,088 | 336 | 7,040 | — |
| chr5_56815214_C_A | chr5:56815214 | 1,024 | 776 | 6,528 | — |
| chr5_56815209_G_T | chr5:56815209 | -1,024 | 192 | 4,224 | — |
| chr5_56814966_C_T | chr5:56814966 | 960 | 0 | 11,904 | — |
| chr5_56814928_T_A | chr5:56814928 | -960 | -1,704 | -7,680 | — |
| chr5_56814963_C_A | chr5:56814963 | -960 | 752 | -3,968 | 1.3e-5 |
| chr5_56815055_G_A | chr5:56815055 | -896 | 776 | -4,992 | — |
| chr5_56815186_C_A | chr5:56815186 | 896 | 288 | 4,352 | — |
| chr5_56814894_T_C | chr5:56814894 | -768 | 1,344 | 5,888 | 6.6e-6 |
| chr5_56815196_T_A | chr5:56815196 | -768 | 568 | -5,120 | — |
| chr5_56815061_G_A | chr5:56815061 | 768 | -328 | -4,480 | — |
| chr5_56815230_C_T | chr5:56815230 | -768 | 240 | 4,480 | — |
| chr5_56814930_C_G | chr5:56814930 | 768 | 1,800 | 4,224 | — |
| chr5_56815025_C_A | chr5:56815025 | -704 | -400 | -6,528 | — |
| chr5_56814973_G_A | chr5:56814973 | -640 | -256 | -4,992 | — |
| chr5_56815231_G_A | chr5:56815231 | 576 | 400 | 6,784 | 1.7e-4 |
| chr5_56815103_T_G | chr5:56815103 | 576 | 344 | 4,480 | — |
| chr5_56815030_G_A | chr5:56815030 | 576 | 40 | -4,224 | 1.3e-5 |
| chr5_56814967_C_G | chr5:56814967 | -512 | -592 | 21,888 | — |
| chr5_56815183_C_A | chr5:56815183 | 512 | 1,208 | 6,016 | — |
| chr5_56814902_G_T | chr5:56814902 | -512 | -512 | -5,888 | 6.6e-6 |
| chr5_56815215_G_A | chr5:56815215 | 512 | 472 | 4,480 | — |
| chr5_56815181_T_G | chr5:56815181 | -384 | -520 | -5,504 | — |
| chr5_56815145_C_A | chr5:56815145 | 384 | 624 | 4,864 | — |
| chr5_56815175_C_T | chr5:56815175 | -384 | 544 | 4,864 | — |
| chr5_56815182_G_T | chr5:56815182 | 384 | 1,504 | 4,736 | — |
| chr5_56815017_G_T | chr5:56815017 | 320 | 1,072 | -5,632 | — |
| chr5_56814967_C_A | chr5:56814967 | 256 | -72 | 12,928 | — |
| chr5_56814964_C_A | chr5:56814964 | 256 | 120 | 5,376 | — |
| chr5_56815176_A_G | chr5:56815176 | -256 | -656 | -3,968 | — |
| chr5_56814948_C_A | chr5:56814948 | -192 | -416 | -4,352 | — |
| chr5_56815210_C_T | chr5:56815210 | 128 | 616 | 5,632 | 6.6e-6 |
| chr5_56815157_T_G | chr5:56815157 | -128 | -288 | 4,352 | — |
| chr5_56814976_G_C | chr5:56814976 | 128 | 216 | 4,096 | — |
| chr5_56814965_A_T | chr5:56814965 | 64 | -1,024 | 7,040 | — |
| chr5_56815227_C_T | chr5:56815227 | 64 | 632 | 5,632 | 1.3e-5 |
| chr5_56815176_A_C | chr5:56815176 | 0 | -608 | -4,864 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.