Home / Gene
SF3A1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SF3A1
chr22:30,231,987..30,456,894, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr22_30337647_T_A | chr22:30337647 | 15,616 | 7,056 | 13,440 | — |
| chr22_30337658_A_T | chr22:30337658 | 14,624 | 5,744 | 12,160 | — |
| chr22_30337647_T_C | chr22:30337647 | 13,760 | 5,776 | 15,104 | 7.1e-6 |
| chr22_30325940_G_C | chr22:30325940 | 11,776 | 2,960 | 5,120 | — |
| chr22_30337640_C_T | chr22:30337640 | -11,168 | -3,984 | -11,136 | — |
| chr22_30337642_C_G | chr22:30337642 | -10,688 | -4,448 | -11,776 | — |
| chr22_30337640_C_G | chr22:30337640 | -10,592 | -4,192 | -10,880 | — |
| chr22_30337646_G_T | chr22:30337646 | 9,984 | 3,568 | 11,008 | — |
| chr22_30337652_G_C | chr22:30337652 | -9,984 | -4,384 | -10,752 | — |
| chr22_30337661_G_A | chr22:30337661 | 9,344 | 4,192 | 6,912 | — |
| chr22_30337636_T_G | chr22:30337636 | -8,960 | -3,440 | -8,832 | — |
| chr22_30337655_C_A | chr22:30337655 | -8,768 | -3,312 | -8,064 | — |
| chr22_30337654_A_C | chr22:30337654 | 8,576 | 3,936 | 9,728 | — |
| chr22_30337638_G_A | chr22:30337638 | -8,224 | -2,976 | -8,064 | — |
| chr22_30337638_G_C | chr22:30337638 | -7,744 | -2,880 | -7,040 | — |
| chr22_30337642_C_A | chr22:30337642 | -7,552 | -2,912 | -8,192 | — |
| chr22_30337652_G_A | chr22:30337652 | -7,296 | -3,280 | -8,448 | — |
| chr22_30337644_T_A | chr22:30337644 | 7,104 | 2,752 | 7,808 | — |
| chr22_30337644_T_C | chr22:30337644 | 7,040 | 2,336 | 8,064 | — |
| chr22_30337636_T_A | chr22:30337636 | -6,944 | -2,624 | -8,192 | — |
| chr22_30337645_G_T | chr22:30337645 | 6,880 | 2,096 | 4,864 | — |
| chr22_30337646_G_A | chr22:30337646 | 6,784 | 2,960 | 6,528 | — |
| chr22_30256359_C_G | chr22:30256359 | 6,656 | 752 | 13,824 | — |
| chr22_30256337_C_G | chr22:30256337 | 6,592 | 528 | 10,752 | — |
| chr22_30337636_T_C | chr22:30337636 | -6,464 | -2,496 | -7,936 | — |
| chr22_30337637_T_G | chr22:30337637 | -6,464 | -2,848 | -7,936 | — |
| chr22_30337637_T_A | chr22:30337637 | -6,272 | -2,560 | -7,552 | — |
| chr22_30337652_G_T | chr22:30337652 | -6,144 | -2,656 | -6,528 | — |
| chr22_30337651_T_C | chr22:30337651 | -6,080 | -2,464 | -6,144 | — |
| chr22_30256351_C_A | chr22:30256351 | 5,952 | 208 | 8,960 | — |
| chr22_30325882_G_C | chr22:30325882 | 5,952 | 1,968 | 3,328 | — |
| chr22_30337641_C_A | chr22:30337641 | 5,920 | 2,928 | 7,040 | — |
| chr22_30337659_T_A | chr22:30337659 | -5,792 | -2,080 | -4,352 | — |
| chr22_30337633_T_A | chr22:30337633 | 5,728 | 2,416 | 6,528 | — |
| chr22_30337637_T_C | chr22:30337637 | -5,664 | -2,320 | -5,632 | — |
| chr22_30337644_T_G | chr22:30337644 | -5,568 | -2,368 | -6,912 | — |
| chr22_30337656_T_G | chr22:30337656 | -5,472 | -1,984 | -2,304 | — |
| chr22_30256370_A_G | chr22:30256370 | 5,312 | 960 | 13,312 | — |
| chr22_30337639_G_C | chr22:30337639 | -5,312 | -1,952 | -6,016 | — |
| chr22_30256338_C_G | chr22:30256338 | 5,248 | 720 | 11,008 | — |
| chr22_30337646_G_C | chr22:30337646 | 5,248 | 2,160 | 6,528 | — |
| chr22_30337639_G_T | chr22:30337639 | -5,184 | -1,616 | -5,376 | — |
| chr22_30337655_C_G | chr22:30337655 | -5,120 | -1,408 | -2,176 | — |
| chr22_30337659_T_G | chr22:30337659 | -5,088 | -1,808 | -3,840 | — |
| chr22_30256356_T_C | chr22:30256356 | -5,056 | -224 | -6,656 | — |
| chr22_30337635_C_A | chr22:30337635 | -4,992 | -2,176 | -6,784 | — |
| chr22_30256339_T_G | chr22:30256339 | 4,928 | 496 | 7,936 | — |
| chr22_30337651_T_G | chr22:30337651 | -4,928 | -1,408 | -1,920 | — |
| chr22_30337649_C_A | chr22:30337649 | 4,864 | 2,240 | 6,656 | — |
| chr22_30337661_G_C | chr22:30337661 | 4,864 | 1,872 | 5,504 | — |
| chr22_30337651_T_A | chr22:30337651 | -4,864 | -1,776 | -4,096 | — |
| chr22_30337655_C_T | chr22:30337655 | -4,864 | -1,680 | -4,736 | 7.3e-6 |
| chr22_30256351_C_G | chr22:30256351 | 4,672 | 160 | 5,376 | — |
| chr22_30337642_C_T | chr22:30337642 | -4,640 | -1,664 | -4,352 | 1.4e-5 |
| chr22_30337650_C_T | chr22:30337650 | 4,544 | 1,776 | 3,328 | — |
| chr22_30337656_T_C | chr22:30337656 | -4,512 | -1,760 | -3,968 | — |
| chr22_30337633_T_G | chr22:30337633 | 4,480 | 1,920 | 4,992 | — |
| chr22_30256392_C_G | chr22:30256392 | -4,416 | -336 | -4,608 | — |
| chr22_30325924_G_C | chr22:30325924 | 4,416 | 896 | 4,096 | — |
| chr22_30256334_G_C | chr22:30256334 | 4,288 | 432 | 9,472 | — |
| chr22_30256333_T_C | chr22:30256333 | 4,288 | 160 | 8,192 | — |
| chr22_30256332_C_G | chr22:30256332 | 4,224 | 224 | 8,192 | — |
| chr22_30256352_C_G | chr22:30256352 | 4,224 | 400 | 5,120 | — |
| chr22_30325957_G_T | chr22:30325957 | 4,160 | 368 | 1,536 | — |
| chr22_30337654_A_T | chr22:30337654 | -4,128 | -1,584 | -3,712 | — |
| chr22_30337643_G_T | chr22:30337643 | 4,096 | 2,160 | 2,688 | — |
| chr22_30337660_G_A | chr22:30337660 | -4,032 | -1,696 | -4,224 | — |
| chr22_30256355_T_C | chr22:30256355 | -3,968 | -256 | -5,888 | — |
| chr22_30337658_A_C | chr22:30337658 | 3,808 | 1,488 | 3,584 | — |
| chr22_30325971_C_G | chr22:30325971 | 3,712 | 272 | 2,048 | — |
| chr22_30337645_G_A | chr22:30337645 | 3,680 | 1,376 | 3,584 | — |
| chr22_30256337_C_T | chr22:30256337 | 3,648 | 240 | 2,560 | — |
| chr22_30337660_G_T | chr22:30337660 | -3,616 | -1,536 | -3,328 | — |
| chr22_30256347_C_G | chr22:30256347 | -3,584 | 0 | -5,888 | — |
| chr22_30337635_C_T | chr22:30337635 | -3,584 | -1,312 | -4,224 | — |
| chr22_30337660_G_C | chr22:30337660 | -3,552 | -1,200 | -2,688 | — |
| chr22_30256330_T_A | chr22:30256330 | -3,520 | 800 | -8,960 | — |
| chr22_30337648_C_A | chr22:30337648 | -3,520 | -1,440 | -4,480 | — |
| chr22_30325971_C_A | chr22:30325971 | 3,520 | 192 | 768 | — |
| chr22_30337638_G_T | chr22:30337638 | -3,488 | -800 | -4,480 | — |
| chr22_30337653_A_C | chr22:30337653 | -3,488 | -1,360 | -2,432 | — |
| chr22_30256346_G_C | chr22:30256346 | -3,456 | 32 | -8,960 | 6.6e-6 |
| chr22_30337629_A_C | chr22:30337629 | 3,456 | 1,184 | 4,096 | — |
| chr22_30337645_G_C | chr22:30337645 | 3,392 | 1,152 | 3,328 | — |
| chr22_30256370_A_C | chr22:30256370 | 3,328 | 272 | 6,400 | — |
| chr22_30337634_A_T | chr22:30337634 | 3,264 | 1,296 | 4,992 | — |
| chr22_30337634_A_G | chr22:30337634 | -3,264 | -1,168 | -2,560 | — |
| chr22_30337632_G_C | chr22:30337632 | -3,200 | -1,184 | -4,224 | — |
| chr22_30325971_C_T | chr22:30325971 | 3,136 | 192 | 1,536 | 1.3e-5 |
| chr22_30337632_G_T | chr22:30337632 | -3,072 | -1,152 | -3,968 | — |
| chr22_30325973_T_G | chr22:30325973 | 3,072 | 240 | 3,840 | — |
| chr22_30325973_T_A | chr22:30325973 | 3,072 | 352 | 2,816 | — |
| chr22_30325975_T_A | chr22:30325975 | 3,008 | 400 | 2,816 | — |
| chr22_30337656_T_A | chr22:30337656 | -3,008 | -1,120 | -128 | — |
| chr22_30256353_A_C | chr22:30256353 | -2,880 | -176 | -4,096 | — |
| chr22_30337635_C_G | chr22:30337635 | -2,880 | -1,136 | -4,096 | — |
| chr22_30325974_G_A | chr22:30325974 | 2,880 | 544 | 1,280 | — |
| chr22_30337641_C_T | chr22:30337641 | 2,848 | 1,120 | 3,712 | — |
| chr22_30256350_C_G | chr22:30256350 | 2,816 | -560 | 9,472 | — |
| chr22_30256353_A_G | chr22:30256353 | 2,816 | 144 | 4,352 | — |
| chr22_30325973_T_C | chr22:30325973 | 2,816 | 240 | 4,352 | — |
| chr22_30256330_T_C | chr22:30256330 | -2,816 | 96 | -2,304 | — |
| chr22_30325970_A_G | chr22:30325970 | 2,752 | 208 | 3,840 | — |
| chr22_30256334_G_A | chr22:30256334 | 2,752 | 256 | 2,304 | — |
| chr22_30325974_G_C | chr22:30325974 | 2,752 | 496 | 2,304 | — |
| chr22_30337634_A_C | chr22:30337634 | -2,720 | -1,040 | -2,432 | — |
| chr22_30256342_T_C | chr22:30256342 | 2,688 | 192 | 7,168 | — |
| chr22_30325975_T_G | chr22:30325975 | 2,688 | 464 | 5,376 | — |
| chr22_30256360_T_G | chr22:30256360 | 2,688 | 256 | 4,096 | — |
| chr22_30256346_G_A | chr22:30256346 | -2,688 | -416 | -3,840 | 6.6e-6 |
| chr22_30256348_G_A | chr22:30256348 | -2,560 | -176 | -11,264 | 6.6e-4 |
| chr22_30256356_T_A | chr22:30256356 | -2,560 | -16 | -5,888 | — |
| chr22_30337650_C_A | chr22:30337650 | 2,496 | 1,008 | 3,456 | — |
| chr22_30256333_T_G | chr22:30256333 | 2,432 | 144 | 5,632 | — |
| chr22_30325975_T_C | chr22:30325975 | 2,432 | 432 | 4,608 | — |
| chr22_30325972_C_A | chr22:30325972 | 2,432 | 704 | 3,584 | — |
| chr22_30337657_A_C | chr22:30337657 | 2,400 | 1,296 | 4,864 | — |
| chr22_30337640_C_A | chr22:30337640 | -2,368 | -544 | -3,328 | — |
| chr22_30256342_T_G | chr22:30256342 | 2,304 | 384 | 6,144 | — |
| chr22_30256483_A_C | chr22:30256483 | -2,304 | -336 | -4,864 | — |
| chr22_30256356_T_G | chr22:30256356 | -2,304 | -32 | -2,816 | — |
| chr22_30256348_G_C | chr22:30256348 | -2,240 | -512 | -6,656 | — |
| chr22_30325921_T_G | chr22:30325921 | -2,240 | -112 | -3,584 | — |
| chr22_30337632_G_A | chr22:30337632 | -2,240 | -816 | -3,456 | — |
| chr22_30256383_T_C | chr22:30256383 | -2,240 | -48 | -3,072 | — |
| chr22_30256359_C_T | chr22:30256359 | 2,176 | 240 | 3,072 | — |
| chr22_30256483_A_G | chr22:30256483 | -2,112 | -304 | -3,328 | — |
| chr22_30256390_C_G | chr22:30256390 | -2,112 | -192 | -2,816 | — |
| chr22_30256345_C_T | chr22:30256345 | -2,048 | -80 | -5,120 | 7.2e-5 |
| chr22_30256375_G_C | chr22:30256375 | -2,048 | -32 | -2,816 | — |
| chr22_30256387_C_A | chr22:30256387 | -2,048 | -144 | -2,816 | 6.6e-6 |
| chr22_30256362_A_G | chr22:30256362 | 1,856 | 208 | 4,352 | — |
| chr22_30256346_G_T | chr22:30256346 | -1,792 | -192 | -7,168 | — |
| chr22_30325976_T_G | chr22:30325976 | 1,792 | 368 | 3,840 | — |
| chr22_30325923_G_C | chr22:30325923 | 1,792 | 128 | 3,328 | — |
| chr22_30256330_T_G | chr22:30256330 | 1,728 | -80 | 5,120 | — |
| chr22_30256375_G_A | chr22:30256375 | -1,728 | 0 | -3,840 | 1.8e-4 |
| chr22_30325928_C_T | chr22:30325928 | -1,728 | 432 | -3,328 | — |
| chr22_30256363_G_A | chr22:30256363 | -1,728 | -80 | -2,816 | — |
| chr22_30325967_C_T | chr22:30325967 | 1,728 | 16 | -2,816 | 2.6e-5 |
| chr22_30256339_T_C | chr22:30256339 | 1,664 | 320 | 5,376 | — |
| chr22_30256381_T_C | chr22:30256381 | -1,664 | -208 | -3,072 | 6.6e-6 |
| chr22_30256427_G_T | chr22:30256427 | -1,664 | -160 | -2,816 | — |
| chr22_30256362_A_C | chr22:30256362 | 1,600 | 192 | 5,632 | — |
| chr22_30256379_T_C | chr22:30256379 | -1,600 | -176 | -2,816 | — |
| chr22_30256483_A_T | chr22:30256483 | -1,536 | -224 | -3,584 | — |
| chr22_30256426_T_C | chr22:30256426 | 1,536 | 144 | 3,328 | — |
| chr22_30337641_C_G | chr22:30337641 | 1,504 | 624 | 2,816 | — |
| chr22_30256481_G_T | chr22:30256481 | -1,472 | -16 | -4,352 | — |
| chr22_30256484_A_G | chr22:30256484 | -1,472 | -208 | -3,072 | — |
| chr22_30256328_T_C | chr22:30256328 | 1,408 | 80 | 4,608 | — |
| chr22_30256338_C_A | chr22:30256338 | 1,408 | -256 | 4,096 | — |
| chr22_30325957_G_C | chr22:30325957 | 1,408 | 128 | 3,328 | — |
| chr22_30325972_C_G | chr22:30325972 | 1,344 | 1,056 | 9,472 | — |
| chr22_30256359_C_A | chr22:30256359 | -1,344 | 32 | -4,864 | — |
| chr22_30256374_C_A | chr22:30256374 | 1,344 | 160 | 3,840 | — |
| chr22_30256469_C_G | chr22:30256469 | 1,344 | 112 | 3,072 | — |
| chr22_30256482_T_A | chr22:30256482 | -1,344 | 0 | -3,072 | 6.6e-6 |
| chr22_30256446_T_C | chr22:30256446 | -1,344 | -240 | -2,816 | — |
| chr22_30256362_A_T | chr22:30256362 | 1,280 | 48 | 2,816 | — |
| chr22_30256343_G_T | chr22:30256343 | 1,216 | 416 | 5,632 | — |
| chr22_30325941_T_C | chr22:30325941 | -1,152 | -80 | 6,656 | — |
| chr22_30256347_C_T | chr22:30256347 | -1,152 | 64 | -4,864 | 2.0e-5 |
| chr22_30256355_T_A | chr22:30256355 | -1,088 | -240 | -6,656 | — |
| chr22_30256424_A_G | chr22:30256424 | 1,088 | 0 | 3,072 | — |
| chr22_30256470_A_C | chr22:30256470 | -1,088 | -112 | -3,072 | — |
| chr22_30256341_C_A | chr22:30256341 | -1,024 | 224 | -3,840 | 4.6e-5 |
| chr22_30256357_C_A | chr22:30256357 | 960 | 608 | -4,096 | 1.3e-5 |
| chr22_30325976_T_C | chr22:30325976 | 960 | 160 | 3,328 | — |
| chr22_30256325_T_C | chr22:30256325 | -960 | 64 | -2,816 | — |
| chr22_30256340_G_T | chr22:30256340 | -960 | 48 | -2,816 | — |
| chr22_30256481_G_A | chr22:30256481 | -896 | 144 | -2,816 | — |
| chr22_30325958_G_A | chr22:30325958 | 832 | 752 | -4,864 | — |
| chr22_30256347_C_A | chr22:30256347 | -832 | 16 | -4,608 | — |
| chr22_30256439_C_A | chr22:30256439 | -832 | 64 | -2,816 | — |
| chr22_30256336_C_A | chr22:30256336 | 768 | 336 | -4,096 | — |
| chr22_30325966_G_A | chr22:30325966 | -768 | -208 | -3,840 | 6.6e-6 |
| chr22_30256358_C_A | chr22:30256358 | -768 | -80 | -3,584 | — |
| chr22_30256328_T_G | chr22:30256328 | 704 | -48 | 6,400 | — |
| chr22_30337649_C_G | chr22:30337649 | 704 | 688 | 3,072 | — |
| chr22_30256406_C_G | chr22:30256406 | 576 | 32 | 3,072 | — |
| chr22_30256449_C_T | chr22:30256449 | -576 | 0 | -3,072 | — |
| chr22_30256352_C_A | chr22:30256352 | 576 | -64 | -2,816 | — |
| chr22_30256345_C_A | chr22:30256345 | -512 | 96 | -5,632 | — |
| chr22_30325886_C_G | chr22:30325886 | 512 | 48 | 2,816 | — |
| chr22_30256336_C_T | chr22:30256336 | -448 | 128 | -3,840 | — |
| chr22_30325850_A_T | chr22:30325850 | 384 | -832 | -3,840 | — |
| chr22_30256473_G_C | chr22:30256473 | -384 | -64 | -3,328 | — |
| chr22_30256327_C_A | chr22:30256327 | -320 | -336 | -4,352 | 6.6e-6 |
| chr22_30256344_C_T | chr22:30256344 | -320 | 80 | -3,840 | — |
| chr22_30256325_T_A | chr22:30256325 | -320 | 240 | -3,328 | — |
| chr22_30256340_G_A | chr22:30256340 | -256 | 32 | -3,584 | — |
| chr22_30325966_G_T | chr22:30325966 | 192 | -80 | -3,584 | 2.0e-5 |
| chr22_30256412_A_G | chr22:30256412 | -192 | -128 | 3,328 | — |
| chr22_30256348_G_T | chr22:30256348 | 128 | -160 | -3,584 | — |
| chr22_30325978_C_A | chr22:30325978 | -128 | -32 | -3,584 | — |
| chr22_30325927_T_G | chr22:30325927 | -128 | 0 | 3,328 | — |
| chr22_30256358_C_T | chr22:30256358 | -128 | -32 | -3,072 | — |
| chr22_30256412_A_C | chr22:30256412 | 64 | -32 | 4,096 | 6.6e-6 |
| chr22_30325893_T_C | chr22:30325893 | 0 | -64 | 2,816 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.