Home / Gene

SLC10A1

receptor: FXRTier 1

Drug substrates

rosuvastatin; bile acids (NTCP is also the HBV/HDV entry receptor)

refs: 25198545

CAMIP causal chains

FXR

Reduced FXR binding would weaken FXR-driven SHP induction; with SHP-mediated repression relieved, SLC10A1/NTCP expression would rise, thus increasing the hepatic clearance of NTCP substrates.

Affected substrate drugs (PharmGKB): rosuvastatin

Scored variants near SLC10A1

chr14:69,675,415..69,897,241, gene body plus 100 kb. Showing the strongest 200 by effect size.

VariantPosition PXR FXR AhR AF
chr14_69685917_G_Achr14:69685917118,91227,61653,504—   
chr14_69685885_T_Gchr14:6968588590,24024,41634,816—   
chr14_69685888_G_Cchr14:6968588886,01618,49634,944—   
chr14_69685888_G_Achr14:6968588876,73620,25630,080—   
chr14_69685844_A_Cchr14:6968584472,76817,24833,920—   
chr14_69685844_A_Tchr14:6968584471,23216,06434,048—   
chr14_69685913_A_Cchr14:6968591368,99219,39238,528—   
chr14_69685862_T_Achr14:6968586265,02418,08029,952—   
chr14_69685899_G_Tchr14:6968589959,8404,96010,368—   
chr14_69685905_A_Cchr14:69685905-57,344-11,968-34,368—   
chr14_69685939_C_Tchr14:69685939-55,488-11,424-29,248—   
chr14_69685937_G_Cchr14:69685937-55,040-10,592-29,376—   
chr14_69685866_T_Cchr14:6968586654,78416,25628,032—   
chr14_69685939_C_Achr14:69685939-54,528-10,912-28,800—   
chr14_69685862_T_Gchr14:6968586254,33615,32824,704—   
chr14_69685937_G_Achr14:69685937-54,080-10,304-29,248—   
chr14_69685939_C_Gchr14:69685939-53,568-11,264-24,256—   
chr14_69685872_G_Cchr14:6968587252,92812,96021,248—   
chr14_69685938_C_Tchr14:69685938-51,520-8,320-26,432—   
chr14_69685871_T_Gchr14:6968587149,15213,56816,640—   
chr14_69685938_C_Achr14:69685938-49,088-8,256-24,896—   
chr14_69685930_G_Tchr14:69685930-45,248-7,200-24,576—   
chr14_69685899_G_Cchr14:6968589945,12010,20821,632—   
chr14_69685885_T_Achr14:6968588544,73611,07220,224—   
chr14_69685929_G_Tchr14:69685929-44,288-7,584-24,640—   
chr14_69685941_G_Cchr14:69685941-43,712-7,200-19,712—   
chr14_69685929_G_Achr14:69685929-42,560-7,520-24,448—   
chr14_69685931_C_Tchr14:69685931-42,048-6,976-20,224—   
chr14_69685930_G_Achr14:69685930-41,984-6,272-22,720—   
chr14_69685929_G_Cchr14:69685929-41,664-8,064-23,232—   
chr14_69685930_G_Cchr14:69685930-40,960-6,272-20,992—   
chr14_69685895_C_Tchr14:6968589540,64010,33618,432—   
chr14_69685888_G_Tchr14:6968588840,3209,98419,328—   
chr14_69685931_C_Gchr14:69685931-40,320-5,824-18,816—   
chr14_69685915_C_Gchr14:69685915-40,000-9,568-22,656—   
chr14_69685914_G_Cchr14:6968591439,6809,47212,416—   
chr14_69685907_C_Gchr14:69685907-39,616-8,704-16,128—   
chr14_69685920_G_Tchr14:69685920-39,488-8,064-22,080—   
chr14_69685928_T_Cchr14:69685928-39,296-7,296-21,376—   
chr14_69685862_T_Cchr14:6968586239,10410,62416,128—   
chr14_69685940_A_Tchr14:69685940-38,656-7,296-20,608—   
chr14_69685941_G_Tchr14:69685941-38,656-6,656-17,216—   
chr14_69685937_G_Tchr14:69685937-38,528-7,584-19,840—   
chr14_69685938_C_Gchr14:69685938-38,464-6,432-18,112—   
chr14_69685962_G_Tchr14:69685962-37,888-5,760-19,136—   
chr14_69685950_A_Cchr14:69685950-37,440-5,024-17,216—   
chr14_69685907_C_Tchr14:69685907-37,248-8,768-16,896—   
chr14_69685940_A_Gchr14:69685940-36,864-8,576-21,248—   
chr14_69685928_T_Achr14:69685928-35,968-6,592-19,904—   
chr14_69685880_A_Tchr14:69685880-35,712-9,408-20,288—   
chr14_69685849_C_Gchr14:69685849-35,392-9,664-22,592—   
chr14_69685877_T_Achr14:69685877-34,048-8,480-16,000—   
chr14_69685928_T_Gchr14:69685928-33,856-6,816-20,224—   
chr14_69685874_A_Cchr14:6968587433,72810,62419,584—   
chr14_69685886_G_Tchr14:69685886-33,472-8,416-19,584—   
chr14_69685878_G_Achr14:69685878-33,344-7,616-18,880—   
chr14_69685882_T_Achr14:69685882-33,344-7,552-16,128—   
chr14_69685884_T_Achr14:69685884-32,896-8,288-17,408—   
chr14_69685878_G_Cchr14:69685878-32,640-7,296-18,112—   
chr14_69685877_T_Gchr14:69685877-32,512-8,384-15,936—   
chr14_69685879_G_Cchr14:69685879-32,128-9,440-15,104—   
chr14_69685927_G_Tchr14:6968592732,0005,47214,848—   
chr14_69685886_G_Achr14:69685886-31,168-7,520-14,464—   
chr14_69685881_C_Gchr14:69685881-30,656-8,704-17,728—   
chr14_69685882_T_Cchr14:6968588230,6568,51214,592—   
chr14_69685880_A_Gchr14:69685880-30,464-8,512-17,728—   
chr14_69685910_T_Gchr14:6968591030,3369,31222,656—   
chr14_69685861_C_Gchr14:6968586130,2728,86414,4646.6e-6
chr14_69685879_G_Tchr14:69685879-29,888-7,552-18,624—   
chr14_69685860_C_Tchr14:69685860-29,760-7,840-16,000—   
chr14_69685907_C_Achr14:69685907-29,376-5,312-11,904—   
chr14_69685927_G_Cchr14:6968592729,0563,68015,104—   
chr14_69685915_C_Achr14:69685915-28,992-6,688-16,384—   
chr14_69685940_A_Cchr14:69685940-28,992-5,408-13,888—   
chr14_69685878_G_Tchr14:69685878-28,608-6,656-16,768—   
chr14_69685886_G_Cchr14:69685886-28,480-7,616-15,680—   
chr14_69685845_T_Cchr14:6968584528,2887,93615,104—   
chr14_69685852_C_Achr14:6968585228,1606,59211,392—   
chr14_69685881_C_Tchr14:69685881-28,160-7,872-18,560—   
chr14_69685971_G_Tchr14:69685971-27,712-3,648-14,592—   
chr14_69685913_A_Tchr14:6968591327,5206,43213,696—   
chr14_69685877_T_Cchr14:69685877-27,008-7,200-12,288—   
chr14_69685908_T_Cchr14:69685908-26,688-6,176-16,192—   
chr14_69685889_C_Gchr14:69685889-26,304-6,784-13,760—   
chr14_69685884_T_Gchr14:69685884-25,792-6,720-12,928—   
chr14_69685828_C_Gchr14:69685828-25,408-7,680-15,616—   
chr14_69685851_C_Tchr14:69685851-25,216-6,560-13,4402.0e-5
chr14_69685876_T_Achr14:69685876-25,216-5,952-12,992—   
chr14_69685853_C_Gchr14:6968585325,0886,40015,616—   
chr14_69685825_G_Achr14:69685825-25,024-7,040-15,104—   
chr14_69685898_A_Gchr14:6968589824,7685,95211,776—   
chr14_69685828_C_Achr14:69685828-24,320-7,008-17,152—   
chr14_69685835_A_Cchr14:6968583524,3205,8569,728—   
chr14_69685847_G_Cchr14:69685847-24,192-6,304-16,640—   
chr14_69685883_T_Gchr14:69685883-24,000-6,880-11,264—   
chr14_69685891_G_Tchr14:69685891-23,808-5,056-11,648—   
chr14_69685887_T_Achr14:6968588723,7446,04811,904—   
chr14_69685858_T_Gchr14:6968585823,6165,7929,088—   
chr14_69685894_G_Tchr14:69685894-23,424-5,536-14,016—   
chr14_69685843_A_Gchr14:69685843-23,296-4,736-16,8966.6e-6
chr14_69685933_G_Tchr14:69685933-23,296-2,336-4,800—   
chr14_69685829_T_Gchr14:69685829-23,232-6,304-11,264—   
chr14_69685898_A_Tchr14:6968589823,1686,01611,776—   
chr14_69685889_C_Achr14:69685889-22,784-6,176-11,712—   
chr14_69685832_G_Cchr14:69685832-22,720-2,784-5,504—   
chr14_69685882_T_Gchr14:69685882-22,656-6,016-8,832—   
chr14_69685915_C_Tchr14:69685915-22,592-5,376-12,160—   
chr14_69685859_G_Tchr14:69685859-21,952-4,800-7,552—   
chr14_69685936_T_Cchr14:69685936-21,952-4,512-9,728—   
chr14_69685819_C_Gchr14:69685819-21,888-7,584-14,848—   
chr14_69685829_T_Achr14:69685829-21,696-6,016-11,648—   
chr14_69685914_G_Tchr14:6968591421,5045,7927,040—   
chr14_69685883_T_Achr14:69685883-21,376-6,240-10,752—   
chr14_69685970_A_Cchr14:69685970-21,312-2,592-8,384—   
chr14_69685818_A_Cchr14:69685818-21,120-5,696-11,520—   
chr14_69685875_T_Cchr14:6968587520,9926,6248,576—   
chr14_69685967_G_Cchr14:69685967-20,864-2,880-10,752—   
chr14_69685872_G_Tchr14:69685872-20,800-5,120-14,272—   
chr14_69685884_T_Cchr14:69685884-20,800-5,792-9,600—   
chr14_69685831_T_Achr14:69685831-20,736-4,704-10,368—   
chr14_69685923_A_Tchr14:6968592320,4163,07210,496—   
chr14_69685820_A_Cchr14:69685820-20,352-6,048-11,264—   
chr14_69685895_C_Gchr14:69685895-20,288-2,176-6,784—   
chr14_69685900_A_Cchr14:6968590020,2885,0249,728—   
chr14_69685860_C_Achr14:6968586020,1604,9927,168—   
chr14_69685948_G_Tchr14:69685948-20,032-3,200-11,968—   
chr14_69685847_G_Achr14:69685847-19,968-5,344-14,720—   
chr14_69685973_T_Cchr14:69685973-19,968-3,072-10,240—   
chr14_69685969_C_Achr14:69685969-19,904-2,976-9,792—   
chr14_69685887_T_Gchr14:6968588719,5844,3849,216—   
chr14_69685842_A_Gchr14:69685842-19,520-4,768-14,720—   
chr14_69685931_C_Achr14:69685931-19,456-2,688-8,704—   
chr14_69685867_G_Cchr14:69685867-19,328-5,216-11,776—   
chr14_69685855_G_Tchr14:69685855-19,200-4,608-9,600—   
chr14_69685847_G_Tchr14:69685847-19,072-5,152-14,720—   
chr14_69741167_T_Achr14:69741167-19,008-5,344-17,216—   
chr14_69685880_A_Cchr14:69685880-18,944-5,920-8,448—   
chr14_69685819_C_Achr14:69685819-18,752-7,328-13,312—   
chr14_69685920_G_Achr14:6968592018,6884,83212,2882.0e-5
chr14_69685971_G_Cchr14:69685971-18,624-960-8,0646.6e-6
chr14_69685866_T_Gchr14:69685866-18,560-3,968-9,216—   
chr14_69685853_C_Achr14:6968585318,4324,51210,752—   
chr14_69685871_T_Achr14:6968587118,3684,5444,992—   
chr14_69685887_T_Cchr14:6968588718,3684,80012,160—   
chr14_69685897_G_Achr14:69685897-18,304-5,280-9,728—   
chr14_69685838_T_Cchr14:6968583818,2404,16010,496—   
chr14_69685889_C_Tchr14:69685889-18,240-4,768-8,704—   
chr14_69685824_T_Gchr14:69685824-18,048-6,432-11,904—   
chr14_69685869_A_Tchr14:69685869-17,984-5,280-10,752—   
chr14_69685871_T_Cchr14:6968587117,8564,19210,112—   
chr14_69685818_A_Tchr14:69685818-17,728-4,928-9,728—   
chr14_69685855_G_Achr14:69685855-17,728-3,616-9,4726.6e-6
chr14_69685866_T_Achr14:69685866-17,664-3,488-7,808—   
chr14_69685872_G_Achr14:69685872-17,536-3,296-8,320—   
chr14_69685913_A_Gchr14:6968591317,4723,7128,064—   
chr14_69685964_C_Achr14:69685964-17,408-2,112-9,536—   
chr14_69685864_T_Achr14:69685864-17,280-4,256-10,624—   
chr14_69685922_G_Achr14:69685922-17,152-3,136-6,016—   
chr14_69685985_G_Tchr14:69685985-17,088-2,048-7,808—   
chr14_69685819_C_Tchr14:69685819-17,024-6,080-11,264—   
chr14_69685841_T_Cchr14:69685841-16,960-3,648-10,752—   
chr14_69685870_A_Tchr14:6968587016,8323,7447,936—   
chr14_69685941_G_Achr14:6968594116,6403,0403,840—   
chr14_69685864_T_Cchr14:69685864-16,576-4,256-10,624—   
chr14_69685909_C_Achr14:6968590916,5123,9689,728—   
chr14_69685924_G_Cchr14:6968592416,5124,48012,544—   
chr14_69685850_A_Gchr14:69685850-16,448-4,800-10,240—   
chr14_69685840_G_Cchr14:69685840-16,384-4,576-14,976—   
chr14_69685865_G_Tchr14:69685865-16,256-4,096-11,136—   
chr14_69685870_A_Cchr14:6968587016,0643,4567,168—   
chr14_69685855_G_Cchr14:69685855-16,000-3,744-8,320—   
chr14_69685921_T_Gchr14:6968592116,0003,0083,968—   
chr14_69685952_A_Cchr14:69685952-15,872-1,312-6,272—   
chr14_69685963_C_Gchr14:6968596315,8089605,376—   
chr14_69685826_T_Cchr14:69685826-15,744-4,416-8,832—   
chr14_69685869_A_Gchr14:69685869-15,744-2,848-5,8881.3e-5
chr14_69685958_A_Gchr14:6968595815,6803,4248,960—   
chr14_69685970_A_Gchr14:69685970-15,616-2,400-7,168—   
chr14_69685897_G_Cchr14:6968589715,4243,5206,144—   
chr14_69685894_G_Cchr14:69685894-15,296-1,440-6,272—   
chr14_69685881_C_Achr14:69685881-15,168-3,776-3,328—   
chr14_69685896_T_Cchr14:6968589615,1683,0086,272—   
chr14_69685843_A_Tchr14:69685843-15,104-3,488-13,184—   
chr14_69685900_A_Tchr14:6968590015,1043,96811,648—   
chr14_69685865_G_Cchr14:69685865-15,040-4,032-10,112—   
chr14_69685825_G_Cchr14:69685825-14,976-5,152-8,960—   
chr14_69685863_T_Achr14:69685863-14,976-3,648-5,632—   
chr14_69685841_T_Gchr14:69685841-14,912-3,616-10,624—   
chr14_69685921_T_Achr14:6968592114,9122,9124,096—   
chr14_69685981_T_Gchr14:6968598114,9121926,016—   
chr14_69685828_C_Tchr14:69685828-14,848-5,184-11,008—   
chr14_69685846_T_Achr14:6968584614,8483,2965,760—   
chr14_69685856_A_Tchr14:6968585614,6564,0649,088—   
chr14_69685919_C_Gchr14:6968591914,6564,6086,272—   
chr14_69685977_T_Gchr14:69685977-14,592-640-2,688—   
chr14_69685918_T_Gchr14:6968591814,5283,8088,192—   
chr14_69685970_A_Tchr14:69685970-14,528-1,760-6,528—   
chr14_69685902_A_Cchr14:6968590214,4644,8007,680—   
chr14_69685914_G_Achr14:6968591414,4644,5766,144—   
chr14_69719739_T_Achr14:697197393,0082,24016,384—   

Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.