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SLC12A7
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SLC12A7
chr5:950,383..1,212,063, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_958708_C_G | chr5:958708 | 1.000 | 0.995 | 1.000 | — |
| chr5_958712_A_G | chr5:958712 | 0.988 | 1.000 | 1.000 | — |
| chr5_958954_A_T | chr5:958954 | 0.862 | 0.929 | 1.000 | — |
| chr5_958692_G_C | chr5:958692 | 0.840 | 0.777 | 0.859 | — |
| chr5_958938_A_C | chr5:958938 | 0.799 | 0.492 | 1.000 | — |
| chr5_958708_C_A | chr5:958708 | 0.794 | 0.759 | 1.000 | — |
| chr5_958740_A_G | chr5:958740 | 0.759 | 0.629 | 1.000 | — |
| chr5_958786_T_C | chr5:958786 | 0.760 | 0.462 | 1.000 | — |
| chr5_957091_T_C | chr5:957091 | -0.366 | -0.151 | -1.000 | 0.0020% |
| chr5_958744_A_T | chr5:958744 | -0.704 | -0.636 | -0.976 | — |
| chr5_958742_C_G | chr5:958742 | -0.681 | -0.604 | -0.982 | — |
| chr5_958743_A_G | chr5:958743 | -0.614 | -0.614 | -1.000 | — |
| chr5_958744_A_C | chr5:958744 | -0.614 | -0.543 | -0.824 | — |
| chr5_958743_A_C | chr5:958743 | -0.612 | -0.632 | -1.000 | — |
| chr5_958752_C_G | chr5:958752 | -0.601 | -0.530 | -0.482 | — |
| chr5_957511_C_T | chr5:957511 | 0.243 | 0.420 | 1.000 | 0.0013% |
| chr5_958754_G_A | chr5:958754 | -0.557 | -0.538 | -0.553 | — |
| chr5_958774_G_C | chr5:958774 | 0.557 | 0.577 | 0.729 | — |
| chr5_958739_A_C | chr5:958739 | -0.541 | -0.497 | -0.812 | — |
| chr5_957024_C_T | chr5:957024 | -0.364 | -0.221 | -0.947 | <0.001% |
| chr5_958734_A_G | chr5:958734 | -0.524 | -0.459 | -0.871 | — |
| chr5_958727_T_C | chr5:958727 | -0.516 | -0.506 | -0.847 | — |
| chr5_958744_A_G | chr5:958744 | -0.512 | -0.475 | -0.582 | — |
| chr5_958807_A_T | chr5:958807 | 0.453 | 0.391 | 0.906 | — |
| chr5_958839_G_C | chr5:958839 | 0.496 | 0.391 | 0.906 | — |
| chr5_958746_C_G | chr5:958746 | -0.509 | -0.476 | -0.847 | <0.001% |
| chr5_958762_C_G | chr5:958762 | -0.394 | -0.374 | -0.900 | — |
| chr5_958756_T_C | chr5:958756 | 0.446 | 0.155 | 0.882 | — |
| chr5_958743_A_T | chr5:958743 | -0.498 | -0.522 | -0.818 | — |
| chr5_958739_A_T | chr5:958739 | -0.496 | -0.468 | -0.700 | — |
| chr5_958738_A_C | chr5:958738 | -0.494 | -0.509 | -0.765 | — |
| chr5_958747_A_G | chr5:958747 | -0.494 | -0.454 | -0.865 | — |
| chr5_958754_G_C | chr5:958754 | -0.493 | -0.461 | -0.412 | — |
| chr5_958741_C_A | chr5:958741 | 0.488 | 0.779 | 0.765 | — |
| chr5_958746_C_A | chr5:958746 | -0.486 | -0.445 | -0.741 | — |
| chr5_958913_C_T | chr5:958913 | 0.486 | 0.206 | 0.376 | 0.0033% |
| chr5_958731_G_C | chr5:958731 | -0.453 | -0.406 | -0.847 | — |
| chr5_958709_T_C | chr5:958709 | -0.478 | -0.525 | -0.659 | — |
| chr5_958754_G_T | chr5:958754 | -0.478 | -0.435 | -0.424 | — |
| chr5_958954_A_C | chr5:958954 | 0.473 | 0.447 | 0.694 | — |
| chr5_958707_T_A | chr5:958707 | 0.469 | 0.454 | 0.624 | — |
| chr5_958712_A_T | chr5:958712 | 0.469 | 0.466 | 0.518 | — |
| chr5_958738_A_G | chr5:958738 | -0.468 | -0.459 | -0.653 | — |
| chr5_958927_T_G | chr5:958927 | -0.466 | -0.350 | -0.600 | — |
| chr5_958908_G_T | chr5:958908 | -0.463 | -0.467 | -0.424 | — |
| chr5_958755_G_T | chr5:958755 | -0.459 | -0.530 | -0.647 | — |
| chr5_958926_C_G | chr5:958926 | -0.459 | -0.355 | -0.576 | — |
| chr5_958958_G_T | chr5:958958 | 0.453 | 0.325 | 0.235 | — |
| chr5_958923_T_A | chr5:958923 | -0.449 | -0.444 | -0.724 | — |
| chr5_958704_G_T | chr5:958704 | 0.448 | 0.473 | 0.541 | — |
| chr5_958811_C_G | chr5:958811 | -0.424 | -0.388 | -0.788 | — |
| chr5_958956_G_T | chr5:958956 | 0.443 | 0.345 | 0.294 | — |
| chr5_958711_T_C | chr5:958711 | -0.439 | -0.454 | -0.759 | <0.001% |
| chr5_958927_T_A | chr5:958927 | -0.439 | -0.307 | -0.565 | — |
| chr5_958740_A_T | chr5:958740 | 0.434 | 0.373 | 0.765 | — |
| chr5_958837_A_G | chr5:958837 | 0.145 | 0.188 | 0.765 | — |
| chr5_958711_T_G | chr5:958711 | -0.384 | -0.424 | -0.759 | — |
| chr5_957047_G_A | chr5:957047 | -0.236 | -0.121 | -0.747 | <0.001% |
| chr5_958745_A_C | chr5:958745 | -0.423 | -0.440 | -0.688 | — |
| chr5_958729_C_G | chr5:958729 | -0.394 | -0.376 | -0.735 | — |
| chr5_957128_C_T | chr5:957128 | 0.414 | 0.159 | 0.559 | <0.001% |
| chr5_957596_C_T | chr5:957596 | 0.285 | 0.518 | 0.729 | <0.001% |
| chr5_958747_A_C | chr5:958747 | -0.409 | -0.418 | -0.718 | — |
| chr5_958734_A_T | chr5:958734 | -0.383 | -0.322 | -0.718 | — |
| chr5_958816_A_C | chr5:958816 | -0.404 | -0.320 | -0.447 | — |
| chr5_958755_G_A | chr5:958755 | -0.399 | -0.481 | -0.600 | — |
| chr5_958839_G_T | chr5:958839 | 0.371 | 0.330 | 0.706 | — |
| chr5_958756_T_A | chr5:958756 | -0.393 | -0.518 | -0.365 | — |
| chr5_958736_A_T | chr5:958736 | -0.391 | -0.381 | -0.506 | — |
| chr5_958732_G_T | chr5:958732 | -0.386 | -0.311 | -0.612 | — |
| chr5_958908_G_C | chr5:958908 | -0.386 | -0.426 | -0.435 | — |
| chr5_958791_G_C | chr5:958791 | 0.384 | 0.150 | 0.482 | — |
| chr5_958832_G_C | chr5:958832 | -0.381 | -0.396 | -0.541 | — |
| chr5_958729_C_A | chr5:958729 | -0.336 | -0.331 | -0.671 | — |
| chr5_958926_C_A | chr5:958926 | -0.379 | -0.307 | -0.482 | — |
| chr5_958958_G_C | chr5:958958 | 0.379 | 0.221 | 0.165 | 0.126% |
| chr5_958732_G_A | chr5:958732 | -0.378 | -0.308 | -0.635 | 0.0013% |
| chr5_958752_C_A | chr5:958752 | -0.378 | -0.322 | -0.341 | — |
| chr5_958804_C_A | chr5:958804 | -0.378 | -0.287 | -0.518 | — |
| chr5_958739_A_G | chr5:958739 | -0.373 | -0.359 | -0.471 | — |
| chr5_958753_A_C | chr5:958753 | -0.373 | -0.386 | -0.235 | — |
| chr5_958734_A_C | chr5:958734 | 0.371 | 0.278 | 0.471 | — |
| chr5_958742_C_T | chr5:958742 | -0.371 | -0.343 | -0.588 | — |
| chr5_958755_G_C | chr5:958755 | -0.369 | -0.468 | -0.400 | — |
| chr5_958716_T_A | chr5:958716 | 0.366 | 0.277 | 0.376 | — |
| chr5_958875_G_A | chr5:958875 | 0.273 | 0.160 | 0.647 | 1.01% |
| chr5_958737_C_T | chr5:958737 | -0.363 | -0.297 | -0.518 | — |
| chr5_958931_C_G | chr5:958931 | -0.363 | -0.365 | -0.435 | — |
| chr5_958766_G_T | chr5:958766 | -0.361 | -0.282 | -0.471 | — |
| chr5_958730_T_G | chr5:958730 | -0.326 | -0.308 | -0.635 | — |
| chr5_958753_A_T | chr5:958753 | -0.359 | -0.381 | -0.224 | — |
| chr5_958811_C_A | chr5:958811 | -0.304 | -0.280 | -0.635 | — |
| chr5_958851_G_A | chr5:958851 | -0.359 | -0.218 | -0.471 | — |
| chr5_958918_A_T | chr5:958918 | -0.359 | -0.294 | -0.388 | — |
| chr5_958924_T_G | chr5:958924 | -0.359 | -0.188 | -0.129 | — |
| chr5_958814_G_A | chr5:958814 | -0.358 | -0.259 | -0.588 | — |
| chr5_958745_A_G | chr5:958745 | -0.356 | -0.364 | -0.535 | — |
| chr5_958692_G_T | chr5:958692 | 0.354 | 0.363 | 0.329 | — |
| chr5_958735_A_T | chr5:958735 | -0.353 | -0.365 | -0.553 | — |
| chr5_958838_T_G | chr5:958838 | 0.353 | 0.274 | 0.529 | — |
| chr5_958832_G_T | chr5:958832 | -0.351 | -0.335 | -0.506 | — |
| chr5_957130_G_A | chr5:957130 | -0.245 | -0.121 | -0.618 | <0.001% |
| chr5_958715_C_A | chr5:958715 | -0.349 | -0.317 | -0.588 | — |
| chr5_958893_C_A | chr5:958893 | -0.349 | -0.386 | -0.494 | — |
| chr5_958913_C_A | chr5:958913 | 0.349 | 0.236 | 0.259 | — |
| chr5_958942_A_C | chr5:958942 | 0.349 | 0.272 | 0.259 | — |
| chr5_958753_A_G | chr5:958753 | -0.346 | -0.373 | -0.224 | — |
| chr5_958835_G_C | chr5:958835 | -0.295 | -0.279 | -0.612 | — |
| chr5_958719_A_C | chr5:958719 | 0.344 | 0.352 | 0.565 | — |
| chr5_957130_G_T | chr5:957130 | -0.231 | -0.124 | -0.606 | 0.0020% |
| chr5_958706_T_C | chr5:958706 | 0.339 | 0.363 | 0.529 | <0.001% |
| chr5_958813_G_C | chr5:958813 | -0.339 | -0.269 | -0.529 | — |
| chr5_958831_G_T | chr5:958831 | -0.314 | -0.378 | -0.600 | — |
| chr5_958932_A_T | chr5:958932 | -0.339 | -0.201 | -0.035 | — |
| chr5_957027_A_G | chr5:957027 | -0.225 | -0.110 | -0.594 | 0.0066% |
| chr5_957065_C_T | chr5:957065 | -0.203 | -0.072 | -0.594 | 0.0033% |
| chr5_957610_G_A | chr5:957610 | 0.228 | 0.164 | 0.594 | <0.001% |
| chr5_958748_G_A | chr5:958748 | 0.336 | 0.365 | 0.400 | — |
| chr5_958783_T_C | chr5:958783 | -0.333 | -0.301 | -0.494 | — |
| chr5_958752_C_T | chr5:958752 | -0.331 | -0.198 | -0.212 | — |
| chr5_957049_C_A | chr5:957049 | -0.251 | -0.166 | -0.582 | <0.001% |
| chr5_958830_G_T | chr5:958830 | -0.326 | -0.228 | -0.365 | — |
| chr5_958872_G_C | chr5:958872 | -0.326 | -0.241 | -0.376 | — |
| chr5_958709_T_A | chr5:958709 | 0.324 | 0.490 | 0.506 | — |
| chr5_958930_C_T | chr5:958930 | -0.323 | -0.256 | -0.482 | — |
| chr5_958735_A_G | chr5:958735 | -0.321 | -0.322 | -0.541 | — |
| chr5_958833_G_A | chr5:958833 | -0.221 | -0.330 | -0.565 | — |
| chr5_958934_G_C | chr5:958934 | 0.319 | 0.231 | 0.435 | — |
| chr5_958835_G_A | chr5:958835 | -0.316 | -0.277 | -0.447 | — |
| chr5_957600_C_G | chr5:957600 | -0.255 | -0.509 | -0.553 | <0.001% |
| chr5_958812_T_C | chr5:958812 | -0.311 | -0.277 | -0.529 | — |
| chr5_958716_T_C | chr5:958716 | -0.306 | -0.260 | -0.329 | — |
| chr5_958757_A_T | chr5:958757 | -0.306 | -0.282 | -0.294 | — |
| chr5_958800_C_A | chr5:958800 | 0.306 | 0.246 | 0.235 | <0.001% |
| chr5_958800_C_G | chr5:958800 | 0.306 | 0.246 | 0.412 | — |
| chr5_958729_C_T | chr5:958729 | 0.304 | 0.406 | 0.365 | — |
| chr5_958737_C_G | chr5:958737 | -0.304 | -0.299 | -0.424 | — |
| chr5_958699_C_T | chr5:958699 | -0.301 | -0.260 | -0.518 | — |
| chr5_958740_A_C | chr5:958740 | -0.301 | -0.264 | -0.282 | — |
| chr5_958798_G_C | chr5:958798 | -0.301 | -0.226 | -0.329 | — |
| chr5_957451_A_G | chr5:957451 | 0.093 | 0.145 | 0.529 | 0.0013% |
| chr5_958737_C_A | chr5:958737 | -0.300 | -0.260 | -0.459 | — |
| chr5_958761_G_T | chr5:958761 | -0.265 | -0.289 | -0.529 | — |
| chr5_958833_G_T | chr5:958833 | -0.240 | -0.264 | -0.529 | — |
| chr5_958851_G_C | chr5:958851 | -0.218 | -0.221 | -0.529 | — |
| chr5_958907_T_G | chr5:958907 | -0.250 | -0.310 | -0.529 | — |
| chr5_958922_G_C | chr5:958922 | -0.300 | -0.231 | -0.388 | — |
| chr5_958950_G_C | chr5:958950 | 0.300 | 0.305 | 0.376 | <0.001% |
| chr5_958711_T_A | chr5:958711 | -0.298 | -0.343 | -0.512 | — |
| chr5_958830_G_C | chr5:958830 | -0.276 | -0.345 | -0.518 | — |
| chr5_958812_T_G | chr5:958812 | -0.291 | -0.282 | -0.494 | — |
| chr5_958697_C_A | chr5:958697 | -0.253 | -0.297 | -0.506 | — |
| chr5_958714_T_C | chr5:958714 | 0.286 | 0.306 | 0.435 | — |
| chr5_958924_T_C | chr5:958924 | -0.286 | -0.228 | -0.365 | — |
| chr5_958733_G_C | chr5:958733 | 0.281 | 0.335 | 0.329 | — |
| chr5_958794_T_A | chr5:958794 | 0.281 | 0.279 | 0.365 | — |
| chr5_958836_G_C | chr5:958836 | -0.280 | -0.206 | -0.294 | — |
| chr5_958860_C_G | chr5:958860 | 0.280 | 0.287 | 0.376 | — |
| chr5_958869_G_C | chr5:958869 | -0.280 | -0.170 | -0.306 | — |
| chr5_958902_C_A | chr5:958902 | -0.280 | -0.294 | -0.294 | — |
| chr5_958932_A_G | chr5:958932 | -0.280 | -0.190 | -0.259 | — |
| chr5_958710_T_G | chr5:958710 | 0.278 | 0.241 | 0.353 | — |
| chr5_958756_T_G | chr5:958756 | -0.278 | -0.371 | -0.259 | — |
| chr5_958745_A_T | chr5:958745 | -0.275 | -0.103 | -0.165 | — |
| chr5_958850_A_G | chr5:958850 | -0.175 | -0.206 | -0.482 | — |
| chr5_958781_T_A | chr5:958781 | 0.271 | 0.348 | 0.447 | — |
| chr5_958774_G_T | chr5:958774 | 0.270 | 0.253 | 0.412 | — |
| chr5_958779_G_T | chr5:958779 | 0.270 | 0.221 | 0.318 | — |
| chr5_958810_C_G | chr5:958810 | -0.210 | -0.299 | -0.476 | — |
| chr5_958929_G_C | chr5:958929 | -0.270 | -0.155 | -0.082 | — |
| chr5_957717_C_T | chr5:957717 | 0.268 | 0.289 | 0.376 | <0.001% |
| chr5_958757_A_C | chr5:958757 | -0.266 | -0.246 | -0.176 | — |
| chr5_958758_C_A | chr5:958758 | -0.155 | -0.225 | -0.471 | 0.0013% |
| chr5_958772_C_A | chr5:958772 | 0.266 | 0.452 | 0.459 | — |
| chr5_958816_A_T | chr5:958816 | -0.266 | -0.193 | -0.294 | — |
| chr5_958933_G_T | chr5:958933 | -0.266 | -0.218 | -0.271 | — |
| chr5_958699_C_A | chr5:958699 | -0.265 | -0.194 | -0.412 | — |
| chr5_958807_A_C | chr5:958807 | 0.263 | 0.152 | 0.388 | — |
| chr5_958732_G_C | chr5:958732 | -0.260 | -0.181 | -0.459 | — |
| chr5_958810_C_A | chr5:958810 | -0.201 | -0.183 | -0.459 | — |
| chr5_958864_G_A | chr5:958864 | -0.260 | -0.201 | -0.435 | — |
| chr5_958934_G_A | chr5:958934 | 0.260 | 0.206 | 0.412 | <0.001% |
| chr5_958936_G_A | chr5:958936 | 0.260 | 0.190 | 0.353 | — |
| chr5_958817_A_T | chr5:958817 | -0.255 | -0.160 | -0.353 | — |
| chr5_958747_A_T | chr5:958747 | -0.253 | -0.161 | -0.282 | — |
| chr5_958785_G_T | chr5:958785 | 0.218 | 0.226 | 0.447 | — |
| chr5_958867_C_G | chr5:958867 | 0.130 | -0.028 | 0.447 | <0.001% |
| chr5_958891_T_C | chr5:958891 | 0.240 | 0.213 | 0.447 | — |
| chr5_957646_G_A | chr5:957646 | -0.223 | -0.404 | -0.441 | <0.001% |
| chr5_958723_G_A | chr5:958723 | 0.236 | 0.142 | 0.435 | 0.248% |
| chr5_958761_G_C | chr5:958761 | -0.225 | -0.245 | -0.435 | — |
| chr5_958784_G_C | chr5:958784 | 0.246 | 0.150 | 0.271 | — |
| chr5_958838_T_A | chr5:958838 | 0.246 | 0.173 | 0.271 | — |
| chr5_958887_G_A | chr5:958887 | -0.241 | -0.302 | -0.435 | — |
| chr5_958911_C_A | chr5:958911 | -0.216 | -0.246 | -0.435 | — |
| chr5_957645_G_A | chr5:957645 | -0.243 | -0.369 | -0.400 | <0.001% |
| chr5_958736_A_C | chr5:958736 | -0.243 | -0.237 | -0.376 | — |
| chr5_958912_C_T | chr5:958912 | 0.243 | 0.129 | 0.094 | — |
| chr5_958928_G_C | chr5:958928 | -0.243 | -0.201 | -0.188 | — |
| chr5_957063_A_G | chr5:957063 | -0.241 | -0.170 | -0.324 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.