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SLC13A5

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near SLC13A5

chr17:6,584,719..6,813,369, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr17_6592477_A_C	chr17:6592477	0.907	1.000	1.000	0.0026%
chr17_6640199_A_C	chr17:6640199	-0.113	-0.172	-1.000	<0.001%
chr17_6592473_T_G	chr17:6592473	0.585	0.563	0.668	<0.001%
chr17_6651668_G_C	chr17:6651668	0.536	0.069	0.212	—
chr17_6640487_C_G	chr17:6640487	0.067	0.162	0.824	<0.001%
chr17_6591811_T_C	chr17:6591811	0.270	0.244	0.812	1.40%
chr17_6640500_C_G	chr17:6640500	0.116	0.138	0.806	<0.001%
chr17_6591715_T_A	chr17:6591715	-0.006	-0.234	-0.759	<0.001%
chr17_6592400_G_A	chr17:6592400	-0.414	-0.317	-0.585	<0.001%
chr17_6640196_C_T	chr17:6640196	0.060	0.113	0.729	0.0039%
chr17_6592391_T_A	chr17:6592391	-0.399	-0.261	-0.406	0.0020%
chr17_6592451_G_A	chr17:6592451	-0.389	-0.251	-0.238	0.183%
chr17_6591721_A_G	chr17:6591721	0.060	-0.208	-0.685	<0.001%
chr17_6640482_C_G	chr17:6640482	0.077	0.143	0.671	<0.001%
chr17_6641384_G_C	chr17:6641384	-0.130	-0.046	-0.671	<0.001%
chr17_6592450_C_T	chr17:6592450	0.376	0.168	0.085	0.0039%
chr17_6640983_C_A	chr17:6640983	0.363	0.036	-0.059	<0.001%
chr17_6641299_G_C	chr17:6641299	0.353	0.084	0.600	0.0013%
chr17_6641627_C_T	chr17:6641627	0.341	0.353	0.365	0.0013%
chr17_6640784_G_A	chr17:6640784	0.331	-0.088	-0.259	0.0013%
chr17_6592378_C_G	chr17:6592378	0.324	0.365	0.465	<0.001%
chr17_6591733_T_C	chr17:6591733	-0.097	-0.201	-0.565	0.0033%
chr17_6641044_G_A	chr17:6641044	-0.235	-0.107	-0.565	<0.001%
chr17_6591775_C_T	chr17:6591775	0.277	0.203	0.559	0.0020%
chr17_6592453_T_C	chr17:6592453	-0.314	-0.168	-0.124	0.0013%
chr17_6639933_C_T	chr17:6639933	0.037	0.096	0.553	<0.001%
chr17_6641646_A_G	chr17:6641646	-0.308	-0.307	-0.406	<0.001%
chr17_6591734_G_A	chr17:6591734	-0.011	-0.081	-0.541	<0.001%
chr17_6641624_C_G	chr17:6641624	-0.303	-0.274	-0.382	<0.001%
chr17_6641320_G_T	chr17:6641320	-0.017	-0.180	-0.529	<0.001%
chr17_6651673_G_C	chr17:6651673	-0.296	-0.010	0.071	0.0033%
chr17_6640793_G_T	chr17:6640793	0.203	0.160	0.518	<0.001%
chr17_6641662_C_T	chr17:6641662	0.291	0.272	0.188	0.0020%
chr17_6641674_G_A	chr17:6641674	-0.288	-0.221	-0.235	<0.001%
chr17_6651672_A_T	chr17:6651672	0.286	0.264	0.388	—
chr17_6640984_C_A	chr17:6640984	0.283	0.137	0.094	0.0026%
chr17_6651660_C_G	chr17:6651660	-0.283	-0.213	-0.235	—
chr17_6639919_G_C	chr17:6639919	-0.030	-0.079	-0.482	<0.001%
chr17_6640216_C_T	chr17:6640216	0.018	0.065	0.482	<0.001%
chr17_6640726_G_A	chr17:6640726	0.008	0.016	0.482	0.0013%
chr17_6641048_G_C	chr17:6641048	-0.273	-0.155	-0.400	0.0013%
chr17_6641679_G_A	chr17:6641679	-0.268	-0.178	-0.276	0.0013%
chr17_6651510_T_C	chr17:6651510	0.220	-0.028	0.471	<0.001%
chr17_6651567_G_A	chr17:6651567	-0.030	-0.102	-0.471	0.0020%
chr17_6640488_C_A	chr17:6640488	0.022	0.108	0.459	<0.001%
chr17_6651636_G_C	chr17:6651636	0.260	0.008	0.129	—
chr17_6640632_C_T	chr17:6640632	0.258	0.120	0.288	<0.001%
chr17_6641624_C_T	chr17:6641624	-0.258	-0.228	-0.365	<0.001%
chr17_6640489_A_C	chr17:6640489	-0.043	-0.090	-0.447	0.047%
chr17_6651673_G_T	chr17:6651673	-0.253	-0.135	-0.165	—
chr17_6592460_A_G	chr17:6592460	-0.247	-0.147	-0.132	31.4%
chr17_6639481_T_G	chr17:6639481	0.115	0.030	0.435	<0.001%
chr17_6641641_A_G	chr17:6641641	0.245	0.203	0.300	<0.001%
chr17_6651658_G_C	chr17:6651658	-0.245	-0.051	-0.035	—
chr17_6639921_C_T	chr17:6639921	0.033	0.074	0.424	<0.001%
chr17_6640293_C_G	chr17:6640293	0.172	0.103	0.424	0.032%
chr17_6651636_G_T	chr17:6651636	0.240	0.038	0.106	—
chr17_6592339_C_T	chr17:6592339	-0.238	-0.084	-0.253	<0.001%
chr17_6639921_C_A	chr17:6639921	0.037	0.070	0.412	<0.001%
chr17_6640704_G_A	chr17:6640704	-0.186	-0.213	-0.406	0.0013%
chr17_6640198_C_T	chr17:6640198	0.013	0.047	0.400	0.0026%
chr17_6639814_T_C	chr17:6639814	0.097	0.052	0.388	<0.001%
chr17_6640997_C_T	chr17:6640997	0.080	-0.051	-0.388	0.143%
chr17_6651646_C_G	chr17:6651646	-0.170	-0.028	-0.376	—
chr17_6641640_C_G	chr17:6641640	0.210	0.213	0.235	0.0013%
chr17_6651636_G_A	chr17:6651636	0.210	-0.041	-0.024	—
chr17_6591736_C_G	chr17:6591736	-0.087	-0.104	-0.365	<0.001%
chr17_6640826_C_G	chr17:6640826	0.206	0.015	-0.282	<0.001%
chr17_6651598_G_A	chr17:6651598	-0.077	-0.155	-0.365	0.0033%
chr17_6651669_A_C	chr17:6651669	-0.060	-0.228	-0.365	—
chr17_6641042_C_G	chr17:6641042	-0.205	-0.119	-0.353	<0.001%
chr17_6641312_A_G	chr17:6641312	0.203	0.018	0.094	<0.001%
chr17_6641129_A_G	chr17:6641129	0.108	0.048	0.353	<0.001%
chr17_6641295_G_C	chr17:6641295	0.116	0.114	0.353	0.0079%
chr17_6591679_G_C	chr17:6591679	0.180	0.122	0.341	<0.001%
chr17_6651573_G_T	chr17:6651573	-0.193	0.010	0.071	<0.001%
chr17_6640703_C_T	chr17:6640703	0.191	-0.096	-0.300	<0.001%
chr17_6640211_C_T	chr17:6640211	0.035	0.041	0.335	0.0013%
chr17_6640728_A_G	chr17:6640728	-0.052	0.041	0.335	0.035%
chr17_6592380_C_G	chr17:6592380	-0.173	-0.160	-0.332	0.062%
chr17_6640770_A_G	chr17:6640770	-0.188	-0.071	-0.024	<0.001%
chr17_6641026_G_T	chr17:6641026	-0.033	-0.030	-0.329	<0.001%
chr17_6641297_G_C	chr17:6641297	0.126	0.074	0.329	<0.001%
chr17_6651568_C_A	chr17:6651568	-0.007	-0.081	-0.329	0.0053%
chr17_6592383_C_T	chr17:6592383	0.184	0.195	0.209	0.0079%
chr17_6641584_G_T	chr17:6641584	0.183	0.211	0.141	0.0026%
chr17_6641629_T_C	chr17:6641629	0.183	0.173	0.182	<0.001%
chr17_6592413_C_T	chr17:6592413	-0.180	-0.142	-0.212	0.0053%
chr17_6640638_T_C	chr17:6640638	0.025	-0.113	-0.318	<0.001%
chr17_6651421_C_A	chr17:6651421	-0.180	-0.175	-0.118	0.0013%
chr17_6651580_G_C	chr17:6651580	0.000	-0.028	0.318	0.0026%
chr17_6591720_C_T	chr17:6591720	0.090	-0.061	-0.312	0.0013%
chr17_6651644_G_A	chr17:6651644	-0.017	0.069	0.306	—
chr17_6651667_C_T	chr17:6651667	0.082	0.063	0.306	—
chr17_6651423_G_A	chr17:6651423	-0.171	-0.122	-0.141	<0.001%
chr17_6640923_G_A	chr17:6640923	0.170	0.020	0.059	<0.001%
chr17_6591739_G_A	chr17:6591739	-0.063	-0.036	-0.294	<0.001%
chr17_6639958_C_G	chr17:6639958	0.013	0.049	0.294	0.0020%
chr17_6641488_T_C	chr17:6641488	0.062	0.063	0.294	<0.001%
chr17_6651561_G_C	chr17:6651561	-0.166	-0.091	-0.247	0.0026%
chr17_6592364_A_T	chr17:6592364	-0.166	-0.084	-0.268	0.0013%
chr17_6651651_C_G	chr17:6651651	-0.163	-0.063	-0.165	—
chr17_6591778_T_A	chr17:6591778	-0.047	-0.043	-0.282	<0.001%
chr17_6639930_C_T	chr17:6639930	0.012	0.065	0.282	<0.001%
chr17_6651663_T_C	chr17:6651663	-0.037	-0.074	-0.282	—
chr17_6651676_C_A	chr17:6651676	0.160	0.127	0.247	—
chr17_6641653_G_C	chr17:6641653	-0.156	-0.162	-0.176	<0.001%
chr17_6641677_G_A	chr17:6641677	-0.155	-0.081	-0.112	0.0026%
chr17_6640622_C_G	chr17:6640622	0.060	0.029	0.271	<0.001%
chr17_6640682_C_T	chr17:6640682	-0.130	-0.208	-0.271	<0.001%
chr17_6641295_G_T	chr17:6641295	0.105	0.099	0.271	0.0020%
chr17_6651461_G_A	chr17:6651461	-0.153	-0.117	-0.200	0.0020%
chr17_6651586_G_C	chr17:6651586	-0.063	0.015	-0.271	<0.001%
chr17_6651643_G_T	chr17:6651643	0.033	0.127	0.271	—
chr17_6591944_G_A	chr17:6591944	0.150	0.076	0.006	<0.001%
chr17_6640611_C_G	chr17:6640611	0.020	-0.008	0.265	0.0039%
chr17_6592387_T_A	chr17:6592387	0.089	0.084	0.259	<0.001%
chr17_6639912_C_T	chr17:6639912	0.037	0.061	0.259	0.0020%
chr17_6640294_C_G	chr17:6640294	0.037	0.008	0.259	0.621%
chr17_6640621_C_T	chr17:6640621	0.032	0.036	0.259	0.0020%
chr17_6640733_G_A	chr17:6640733	0.000	-0.061	-0.259	0.0020%
chr17_6640818_C_A	chr17:6640818	0.110	0.030	-0.259	<0.001%
chr17_6640932_T_C	chr17:6640932	0.146	0.041	0.235	<0.001%
chr17_6640947_G_C	chr17:6640947	0.003	-0.104	-0.259	<0.001%
chr17_6641361_C_G	chr17:6641361	0.057	0.114	0.259	<0.001%
chr17_6651547_A_T	chr17:6651547	0.146	0.079	0.129	<0.001%
chr17_6651632_T_A	chr17:6651632	0.097	-0.018	0.259	—
chr17_6651666_C_G	chr17:6651666	0.146	0.063	0.200	—
chr17_6651672_A_C	chr17:6651672	-0.023	-0.147	-0.259	—
chr17_6592380_C_T	chr17:6592380	-0.146	-0.157	-0.168	<0.001%
chr17_6592437_G_A	chr17:6592437	-0.133	-0.152	-0.253	0.0013%
chr17_6592476_G_A	chr17:6592476	-0.143	-0.091	-0.182	0.0046%
chr17_6651668_G_T	chr17:6651668	0.143	0.094	0.153	0.013%
chr17_6639684_T_C	chr17:6639684	0.068	0.032	0.247	<0.001%
chr17_6639938_C_T	chr17:6639938	-0.002	0.048	0.247	0.0013%
chr17_6639975_C_G	chr17:6639975	0.025	0.025	0.247	0.0013%
chr17_6640931_G_T	chr17:6640931	0.030	0.142	0.247	<0.001%
chr17_6651643_G_C	chr17:6651643	-0.007	0.081	0.247	—
chr17_6641607_C_T	chr17:6641607	-0.138	-0.145	-0.171	0.627%
chr17_6640612_C_T	chr17:6640612	0.067	0.040	0.241	0.0033%
chr17_6641040_G_C	chr17:6641040	-0.136	-0.058	-0.082	<0.001%
chr17_6591646_A_G	chr17:6591646	0.025	0.000	0.238	0.0066%
chr17_6641049_T_C	chr17:6641049	-0.135	-0.099	-0.235	<0.001%
chr17_6592479_T_C	chr17:6592479	0.133	0.129	0.224	20.6%
chr17_6639673_C_T	chr17:6639673	-0.053	-0.025	-0.235	0.137%
chr17_6640092_G_A	chr17:6640092	-0.055	-0.007	-0.235	<0.001%
chr17_6640689_C_A	chr17:6640689	-0.035	-0.065	-0.235	0.0039%
chr17_6640831_C_G	chr17:6640831	0.106	0.053	-0.235	<0.001%
chr17_6640945_C_T	chr17:6640945	0.030	-0.053	-0.235	0.0026%
chr17_6640972_G_A	chr17:6640972	-0.057	-0.043	-0.235	0.0013%
chr17_6651560_T_A	chr17:6651560	-0.090	-0.084	-0.235	<0.001%
chr17_6651647_G_C	chr17:6651647	-0.133	0.003	0.059	—
chr17_6651648_G_T	chr17:6651648	0.090	0.102	0.235	—
chr17_6592419_T_C	chr17:6592419	-0.131	-0.142	-0.124	<0.001%
chr17_6651582_C_T	chr17:6651582	-0.130	-0.061	-0.106	<0.001%
chr17_6651678_G_T	chr17:6651678	0.130	0.081	0.059	—
chr17_6640767_A_G	chr17:6640767	0.126	0.033	0.094	<0.001%
chr17_6641085_G_T	chr17:6641085	0.013	-0.013	-0.224	0.0013%
chr17_6651660_C_A	chr17:6651660	-0.125	-0.135	0.012	—
chr17_6591818_C_T	chr17:6591818	-0.004	-0.018	-0.218	<0.001%
chr17_6640691_A_G	chr17:6640691	-0.031	-0.067	-0.218	0.0046%
chr17_6640925_A_G	chr17:6640925	-0.123	-0.033	-0.059	0.0013%
chr17_6651660_C_T	chr17:6651660	-0.123	-0.112	0.106	—
chr17_6591825_G_A	chr17:6591825	0.012	-0.028	-0.212	0.0013%
chr17_6639924_G_A	chr17:6639924	-0.010	-0.029	-0.212	0.0046%
chr17_6640141_T_G	chr17:6640141	0.052	-0.012	0.212	<0.001%
chr17_6640805_T_C	chr17:6640805	0.003	0.043	0.212	0.0013%
chr17_6640905_G_A	chr17:6640905	-0.120	-0.074	-0.200	<0.001%
chr17_6641294_G_C	chr17:6641294	0.040	0.066	0.212	0.0039%
chr17_6651500_C_T	chr17:6651500	0.027	-0.071	-0.212	<0.001%
chr17_6651580_G_A	chr17:6651580	-0.120	-0.058	-0.094	0.085%
chr17_6651643_G_A	chr17:6651643	0.093	0.114	0.212	0.0013%
chr17_6651680_G_C	chr17:6651680	0.120	0.099	0.188	—
chr17_6640692_G_C	chr17:6640692	-0.118	0.016	-0.059	<0.001%
chr17_6640795_C_T	chr17:6640795	-0.118	-0.003	-0.094	<0.001%
chr17_6641685_G_A	chr17:6641685	-0.118	-0.109	-0.176	0.0026%
chr17_6592313_C_T	chr17:6592313	0.116	0.091	-0.044	<0.001%
chr17_6640493_C_T	chr17:6640493	0.037	0.049	0.206	<0.001%
chr17_6641366_T_C	chr17:6641366	0.115	0.041	0.141	0.0066%
chr17_6640089_A_G	chr17:6640089	0.022	0.030	0.200	0.0013%
chr17_6640535_G_C	chr17:6640535	-0.014	0.004	0.200	<0.001%
chr17_6640741_C_T	chr17:6640741	0.045	-0.022	-0.200	0.0039%
chr17_6641040_G_A	chr17:6641040	-0.047	-0.030	-0.200	0.0013%
chr17_6641272_A_C	chr17:6641272	0.020	0.038	0.200	<0.001%
chr17_6641587_G_A	chr17:6641587	0.113	0.122	0.124	<0.001%
chr17_6651661_C_A	chr17:6651661	-0.113	0.129	0.059	—
chr17_6651664_C_G	chr17:6651664	0.023	0.066	0.200	—
chr17_6641022_G_C	chr17:6641022	0.111	0.043	0.024	0.021%
chr17_6591835_C_G	chr17:6591835	-0.007	-0.008	-0.194	<0.001%
chr17_6640079_A_G	chr17:6640079	-0.038	-0.028	-0.194	0.0020%
chr17_6651649_G_C	chr17:6651649	-0.110	0.071	0.176	—
chr17_6592311_T_C	chr17:6592311	0.108	0.063	0.056	0.0072%
chr17_6651632_T_G	chr17:6651632	-0.108	-0.056	0.071	—
chr17_6639697_C_A	chr17:6639697	-0.040	-0.018	-0.188	<0.001%
chr17_6639707_C_G	chr17:6639707	-0.080	-0.038	-0.188	<0.001%
chr17_6639741_G_C	chr17:6639741	0.083	0.121	-0.188	<0.001%
chr17_6639951_C_A	chr17:6639951	0.013	0.041	0.188	<0.001%
chr17_6640177_C_A	chr17:6640177	0.027	0.024	0.188	<0.001%
chr17_6640682_C_A	chr17:6640682	-0.106	-0.155	-0.141	0.0013%
chr17_6640800_A_G	chr17:6640800	-0.106	-0.036	-0.047	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.