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SLC38A3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SLC38A3
chr3:50,105,270..50,321,485, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr3_50206238_T_A | chr3:50206238 | 1.000 | 1.000 | 0.518 | — |
| chr3_50206165_C_A | chr3:50206165 | -0.923 | -0.807 | -0.682 | — |
| chr3_50206161_T_A | chr3:50206161 | -0.864 | -0.764 | -0.471 | — |
| chr3_50206225_G_T | chr3:50206225 | 0.864 | 0.713 | 0.788 | — |
| chr3_50206160_G_C | chr3:50206160 | -0.847 | -0.843 | -0.565 | — |
| chr3_50206165_C_G | chr3:50206165 | -0.840 | -0.751 | -0.671 | — |
| chr3_50206160_G_T | chr3:50206160 | -0.802 | -0.779 | -0.459 | — |
| chr3_50210535_C_G | chr3:50210535 | 0.787 | 1.000 | 0.659 | — |
| chr3_50206161_T_G | chr3:50206161 | -0.769 | -0.657 | -0.306 | — |
| chr3_50206163_T_A | chr3:50206163 | -0.754 | -0.627 | -0.482 | — |
| chr3_50206239_G_A | chr3:50206239 | 0.750 | 0.888 | 0.353 | — |
| chr3_50206163_T_C | chr3:50206163 | -0.732 | -0.581 | -0.376 | — |
| chr3_50206188_G_T | chr3:50206188 | -0.697 | -0.822 | -0.553 | — |
| chr3_50206208_G_C | chr3:50206208 | -0.697 | -0.736 | -0.682 | — |
| chr3_50206159_T_A | chr3:50206159 | -0.696 | -0.637 | -0.600 | — |
| chr3_50206159_T_G | chr3:50206159 | -0.689 | -0.640 | -0.588 | — |
| chr3_50206159_T_C | chr3:50206159 | -0.672 | -0.604 | -0.518 | — |
| chr3_50206161_T_C | chr3:50206161 | -0.664 | -0.612 | -0.412 | — |
| chr3_50206164_A_T | chr3:50206164 | -0.654 | -0.548 | -0.588 | — |
| chr3_50206194_A_T | chr3:50206194 | -0.644 | -0.607 | -0.471 | — |
| chr3_50206164_A_C | chr3:50206164 | -0.634 | -0.490 | -0.482 | — |
| chr3_50206190_A_G | chr3:50206190 | -0.631 | -0.586 | -0.894 | — |
| chr3_50206177_G_C | chr3:50206177 | 0.614 | 0.497 | 0.694 | — |
| chr3_50206188_G_A | chr3:50206188 | -0.604 | -0.614 | -0.482 | — |
| chr3_50210560_C_A | chr3:50210560 | -0.599 | -1.000 | -0.553 | — |
| chr3_50206165_C_T | chr3:50206165 | -0.581 | -0.617 | -0.482 | — |
| chr3_50206181_G_T | chr3:50206181 | -0.571 | -0.685 | -0.459 | — |
| chr3_50206208_G_T | chr3:50206208 | -0.566 | -0.660 | -0.482 | — |
| chr3_50206188_G_C | chr3:50206188 | -0.554 | -0.584 | -0.376 | — |
| chr3_50210545_T_A | chr3:50210545 | 0.554 | 0.934 | 0.624 | <0.001% |
| chr3_50206168_C_A | chr3:50206168 | 0.549 | 0.419 | 0.329 | — |
| chr3_50210535_C_T | chr3:50210535 | 0.544 | 0.898 | 0.482 | — |
| chr3_50206238_T_G | chr3:50206238 | 0.529 | 0.754 | 0.353 | — |
| chr3_50206162_T_C | chr3:50206162 | -0.527 | -0.409 | -0.329 | — |
| chr3_50210574_C_G | chr3:50210574 | -0.517 | -0.546 | -0.565 | — |
| chr3_50206199_C_G | chr3:50206199 | -0.514 | -0.477 | -0.541 | — |
| chr3_50206189_G_T | chr3:50206189 | -0.502 | -0.510 | -0.388 | — |
| chr3_50206187_G_T | chr3:50206187 | -0.501 | -0.477 | -0.424 | — |
| chr3_50210563_T_A | chr3:50210563 | -0.499 | -1.000 | -0.706 | — |
| chr3_50210567_C_G | chr3:50210567 | -0.496 | -0.985 | -0.600 | — |
| chr3_50206164_A_G | chr3:50206164 | -0.493 | -0.345 | -0.482 | — |
| chr3_50206208_G_A | chr3:50206208 | -0.493 | -0.591 | -0.412 | — |
| chr3_50210563_T_G | chr3:50210563 | -0.493 | -1.000 | -0.659 | — |
| chr3_50206210_C_A | chr3:50206210 | -0.486 | -0.576 | -0.400 | — |
| chr3_50206189_G_A | chr3:50206189 | -0.474 | -0.477 | -0.376 | — |
| chr3_50206192_G_A | chr3:50206192 | -0.473 | -0.520 | -0.459 | — |
| chr3_50210567_C_T | chr3:50210567 | -0.473 | -0.947 | -0.624 | — |
| chr3_50206162_T_A | chr3:50206162 | -0.469 | -0.431 | -0.424 | — |
| chr3_50206156_G_C | chr3:50206156 | -0.468 | -0.454 | -0.353 | — |
| chr3_50206140_C_G | chr3:50206140 | -0.464 | -0.508 | -0.424 | — |
| chr3_50210559_A_C | chr3:50210559 | -0.459 | -0.863 | -0.482 | — |
| chr3_50210539_G_A | chr3:50210539 | 0.458 | 0.812 | 0.482 | — |
| chr3_50210547_G_T | chr3:50210547 | 0.449 | 0.749 | 0.565 | — |
| chr3_50206211_C_G | chr3:50206211 | -0.448 | -0.490 | -0.412 | — |
| chr3_50206197_T_C | chr3:50206197 | -0.439 | -0.411 | -0.282 | — |
| chr3_50210582_T_C | chr3:50210582 | 0.439 | 0.505 | 0.424 | — |
| chr3_50206141_A_C | chr3:50206141 | -0.436 | -0.381 | -0.471 | — |
| chr3_50206225_G_C | chr3:50206225 | 0.433 | 0.305 | 0.353 | — |
| chr3_50210559_A_G | chr3:50210559 | -0.433 | -0.868 | -0.506 | — |
| chr3_50206210_C_G | chr3:50206210 | -0.426 | -0.541 | -0.400 | — |
| chr3_50210587_T_A | chr3:50210587 | -0.151 | -0.673 | -0.753 | — |
| chr3_50206169_C_G | chr3:50206169 | -0.423 | -0.472 | -0.306 | — |
| chr3_50206148_A_G | chr3:50206148 | 0.419 | 0.376 | 0.212 | — |
| chr3_50210567_C_A | chr3:50210567 | -0.418 | -0.911 | -0.682 | — |
| chr3_50206187_G_C | chr3:50206187 | -0.414 | -0.373 | -0.306 | — |
| chr3_50206140_C_A | chr3:50206140 | -0.411 | -0.444 | -0.435 | — |
| chr3_50206218_C_G | chr3:50206218 | 0.409 | 0.584 | 0.600 | — |
| chr3_50206160_G_A | chr3:50206160 | -0.406 | -0.393 | -0.224 | — |
| chr3_50206218_C_T | chr3:50206218 | 0.401 | 0.378 | 0.400 | <0.001% |
| chr3_50210560_C_T | chr3:50210560 | -0.399 | -1.000 | -0.624 | — |
| chr3_50206162_T_G | chr3:50206162 | -0.396 | -0.254 | -0.353 | — |
| chr3_50210560_C_G | chr3:50210560 | -0.396 | -1.000 | -0.518 | — |
| chr3_50206178_G_C | chr3:50206178 | 0.394 | 0.173 | 0.659 | — |
| chr3_50206193_G_C | chr3:50206193 | -0.393 | -0.505 | -0.400 | — |
| chr3_50210571_G_C | chr3:50210571 | -0.391 | -0.520 | -0.282 | — |
| chr3_50206157_T_A | chr3:50206157 | -0.389 | -0.414 | -0.188 | — |
| chr3_50206254_C_G | chr3:50206254 | -0.388 | -0.393 | -0.318 | — |
| chr3_50206218_C_A | chr3:50206218 | 0.383 | 0.322 | 0.412 | — |
| chr3_50206223_C_G | chr3:50206223 | -0.383 | -0.317 | -0.306 | — |
| chr3_50206223_C_A | chr3:50206223 | -0.381 | -0.345 | -0.376 | — |
| chr3_50206144_G_T | chr3:50206144 | -0.379 | -0.231 | -0.506 | — |
| chr3_50206210_C_T | chr3:50206210 | -0.379 | -0.487 | -0.412 | — |
| chr3_50206169_C_A | chr3:50206169 | -0.374 | -0.444 | -0.306 | — |
| chr3_50206219_C_T | chr3:50206219 | 0.374 | 0.241 | 0.341 | — |
| chr3_50210563_T_C | chr3:50210563 | -0.371 | -0.825 | -0.518 | — |
| chr3_50210564_G_C | chr3:50210564 | -0.371 | -0.967 | -0.565 | — |
| chr3_50206192_G_C | chr3:50206192 | -0.369 | -0.388 | -0.282 | — |
| chr3_50210564_G_A | chr3:50210564 | -0.369 | -0.924 | -0.447 | — |
| chr3_50206211_C_A | chr3:50206211 | -0.368 | -0.536 | -0.471 | — |
| chr3_50210544_C_T | chr3:50210544 | -0.368 | -0.716 | -0.459 | — |
| chr3_50206228_A_T | chr3:50206228 | -0.364 | -0.317 | -0.176 | — |
| chr3_50206209_C_T | chr3:50206209 | -0.363 | -0.368 | -0.294 | — |
| chr3_50206169_C_T | chr3:50206169 | -0.359 | -0.376 | -0.294 | — |
| chr3_50206148_A_T | chr3:50206148 | 0.358 | 0.381 | 0.388 | — |
| chr3_50210561_C_T | chr3:50210561 | 0.358 | 0.688 | 0.588 | — |
| chr3_50206217_C_A | chr3:50206217 | 0.356 | 0.393 | 0.153 | 0.0033% |
| chr3_50210550_A_T | chr3:50210550 | -0.283 | -0.629 | -0.624 | — |
| chr3_50206167_C_T | chr3:50206167 | -0.351 | -0.284 | -0.212 | — |
| chr3_50206219_C_G | chr3:50206219 | 0.351 | 0.195 | 0.471 | 0.0026% |
| chr3_50206191_G_A | chr3:50206191 | -0.349 | -0.315 | -0.365 | — |
| chr3_50206191_G_T | chr3:50206191 | -0.344 | -0.391 | -0.353 | — |
| chr3_50206201_G_T | chr3:50206201 | 0.343 | 0.307 | 0.235 | — |
| chr3_50206145_C_A | chr3:50206145 | -0.341 | -0.279 | -0.376 | — |
| chr3_50210587_T_G | chr3:50210587 | 0.339 | -0.089 | -0.118 | — |
| chr3_50210559_A_T | chr3:50210559 | -0.336 | -0.690 | -0.494 | — |
| chr3_50210569_C_G | chr3:50210569 | -0.336 | -0.497 | -0.259 | 0.0066% |
| chr3_50206179_G_C | chr3:50206179 | 0.334 | 0.299 | 0.329 | — |
| chr3_50206209_C_G | chr3:50206209 | -0.334 | -0.396 | -0.271 | — |
| chr3_50176645_A_G | chr3:50176645 | -0.077 | -0.140 | -0.582 | — |
| chr3_50210547_G_C | chr3:50210547 | 0.329 | 0.470 | 0.365 | — |
| chr3_50206176_G_C | chr3:50206176 | 0.326 | 0.266 | 0.529 | — |
| chr3_50210568_C_G | chr3:50210568 | -0.321 | -0.665 | -0.400 | — |
| chr3_50210574_C_A | chr3:50210574 | -0.319 | -0.602 | -0.459 | — |
| chr3_50206175_G_C | chr3:50206175 | 0.316 | 0.190 | 0.435 | <0.001% |
| chr3_50210558_G_C | chr3:50210558 | -0.316 | -0.734 | -0.294 | — |
| chr3_50210571_G_A | chr3:50210571 | -0.316 | -0.439 | -0.247 | — |
| chr3_50210569_C_T | chr3:50210569 | -0.313 | -0.543 | -0.400 | — |
| chr3_50206166_A_C | chr3:50206166 | -0.311 | -0.330 | -0.294 | — |
| chr3_50206237_C_A | chr3:50206237 | 0.311 | 0.594 | 0.506 | — |
| chr3_50206150_G_A | chr3:50206150 | 0.309 | 0.404 | 0.176 | — |
| chr3_50206217_C_G | chr3:50206217 | 0.300 | 0.287 | 0.282 | — |
| chr3_50206156_G_T | chr3:50206156 | -0.290 | -0.282 | -0.224 | — |
| chr3_50206186_G_C | chr3:50206186 | -0.288 | -0.274 | -0.200 | — |
| chr3_50210556_A_T | chr3:50210556 | 0.288 | 0.518 | 0.435 | — |
| chr3_50206177_G_T | chr3:50206177 | 0.283 | 0.152 | 0.106 | — |
| chr3_50206181_G_C | chr3:50206181 | -0.281 | -0.305 | -0.106 | — |
| chr3_50210562_T_G | chr3:50210562 | -0.280 | -0.690 | -0.176 | — |
| chr3_50206145_C_G | chr3:50206145 | -0.275 | 0.071 | -0.047 | <0.001% |
| chr3_50206216_C_G | chr3:50206216 | 0.275 | 0.480 | 0.247 | — |
| chr3_50206196_C_G | chr3:50206196 | -0.273 | -0.221 | -0.141 | — |
| chr3_50206212_T_G | chr3:50206212 | -0.273 | -0.284 | -0.106 | — |
| chr3_50210566_T_C | chr3:50210566 | 0.273 | 0.637 | 0.282 | — |
| chr3_50206183_C_A | chr3:50206183 | 0.271 | 0.223 | 0.188 | — |
| chr3_50206217_C_T | chr3:50206217 | 0.271 | 0.155 | 0.176 | — |
| chr3_50206231_T_A | chr3:50206231 | 0.271 | 0.302 | 0.106 | — |
| chr3_50210562_T_A | chr3:50210562 | -0.271 | -0.698 | -0.247 | — |
| chr3_50206177_G_A | chr3:50206177 | 0.270 | 0.180 | 0.294 | — |
| chr3_50210575_A_T | chr3:50210575 | -0.270 | -0.353 | -0.212 | — |
| chr3_50210576_G_A | chr3:50210576 | 0.270 | 0.239 | 0.118 | — |
| chr3_50206191_G_C | chr3:50206191 | -0.268 | -0.231 | -0.235 | — |
| chr3_50206223_C_T | chr3:50206223 | -0.268 | -0.254 | -0.259 | — |
| chr3_50210548_G_C | chr3:50210548 | 0.240 | 0.343 | 0.471 | — |
| chr3_50206176_G_A | chr3:50206176 | 0.265 | 0.261 | 0.282 | — |
| chr3_50210581_C_A | chr3:50210581 | -0.265 | -0.470 | -0.435 | — |
| chr3_50206178_G_T | chr3:50206178 | 0.263 | 0.178 | 0.282 | — |
| chr3_50206156_G_A | chr3:50206156 | -0.261 | -0.246 | -0.212 | — |
| chr3_50210562_T_C | chr3:50210562 | -0.261 | -0.673 | -0.365 | — |
| chr3_50206158_T_C | chr3:50206158 | -0.260 | -0.249 | -0.212 | — |
| chr3_50206216_C_A | chr3:50206216 | 0.260 | 0.335 | 0.153 | 0.0039% |
| chr3_50210537_C_A | chr3:50210537 | -0.260 | -0.513 | -0.294 | — |
| chr3_50210568_C_A | chr3:50210568 | -0.260 | -0.556 | -0.424 | — |
| chr3_50210564_G_T | chr3:50210564 | -0.258 | -0.685 | -0.412 | — |
| chr3_50206158_T_G | chr3:50206158 | -0.256 | -0.193 | -0.200 | — |
| chr3_50210565_A_T | chr3:50210565 | -0.255 | -0.652 | -0.306 | — |
| chr3_50176647_T_G | chr3:50176647 | -0.057 | -0.124 | -0.447 | 0.0013% |
| chr3_50210552_T_C | chr3:50210552 | -0.186 | -0.398 | -0.447 | — |
| chr3_50206214_T_A | chr3:50206214 | -0.251 | -0.310 | -0.153 | — |
| chr3_50206187_G_A | chr3:50206187 | -0.250 | -0.213 | -0.200 | 0.0020% |
| chr3_50206190_A_T | chr3:50206190 | -0.250 | -0.241 | -0.247 | — |
| chr3_50210569_C_A | chr3:50210569 | -0.248 | -0.619 | -0.424 | — |
| chr3_50210575_A_C | chr3:50210575 | -0.248 | -0.381 | -0.200 | — |
| chr3_50206167_C_A | chr3:50206167 | -0.243 | -0.299 | -0.176 | <0.001% |
| chr3_50206240_A_G | chr3:50206240 | -0.240 | -0.228 | -0.129 | — |
| chr3_50210550_A_G | chr3:50210550 | -0.205 | -0.434 | -0.424 | — |
| chr3_50206195_C_A | chr3:50206195 | -0.238 | -0.198 | -0.200 | — |
| chr3_50206196_C_A | chr3:50206196 | -0.236 | -0.239 | -0.188 | — |
| chr3_50206197_T_G | chr3:50206197 | -0.235 | -0.201 | -0.141 | — |
| chr3_50206237_C_T | chr3:50206237 | -0.235 | -0.348 | -0.318 | — |
| chr3_50210565_A_G | chr3:50210565 | -0.235 | -0.558 | -0.306 | <0.001% |
| chr3_50176653_G_C | chr3:50176653 | 0.035 | 0.090 | 0.412 | — |
| chr3_50206252_G_T | chr3:50206252 | 0.233 | 0.266 | 0.094 | — |
| chr3_50210548_G_T | chr3:50210548 | 0.220 | 0.431 | 0.412 | — |
| chr3_50206139_C_G | chr3:50206139 | -0.230 | -0.211 | -0.282 | — |
| chr3_50206141_A_T | chr3:50206141 | -0.230 | -0.140 | -0.294 | — |
| chr3_50206172_G_A | chr3:50206172 | -0.230 | -0.239 | -0.176 | — |
| chr3_50206246_G_T | chr3:50206246 | 0.230 | 0.051 | -0.294 | — |
| chr3_50206148_A_C | chr3:50206148 | 0.228 | 0.114 | 0.141 | — |
| chr3_50206228_A_G | chr3:50206228 | -0.228 | -0.160 | -0.082 | — |
| chr3_50210531_A_C | chr3:50210531 | 0.228 | 0.305 | 0.271 | — |
| chr3_50206163_T_G | chr3:50206163 | -0.225 | -0.023 | 0.012 | — |
| chr3_50176654_G_C | chr3:50176654 | 0.040 | 0.082 | 0.394 | — |
| chr3_50206214_T_G | chr3:50206214 | -0.223 | -0.254 | -0.071 | — |
| chr3_50210566_T_G | chr3:50210566 | -0.223 | -0.434 | -0.259 | — |
| chr3_50206144_G_A | chr3:50206144 | -0.221 | -0.266 | -0.271 | <0.001% |
| chr3_50206149_T_C | chr3:50206149 | 0.221 | 0.137 | 0.224 | <0.001% |
| chr3_50206185_A_T | chr3:50206185 | -0.221 | -0.221 | -0.188 | — |
| chr3_50206215_T_A | chr3:50206215 | 0.221 | 0.325 | 0.224 | — |
| chr3_50206189_G_C | chr3:50206189 | -0.220 | -0.190 | -0.129 | — |
| chr3_50206155_C_T | chr3:50206155 | 0.216 | 0.234 | 0.129 | — |
| chr3_50210541_G_C | chr3:50210541 | -0.216 | -0.315 | -0.129 | — |
| chr3_50206170_A_G | chr3:50206170 | -0.215 | -0.228 | -0.165 | — |
| chr3_50206219_C_A | chr3:50206219 | 0.215 | 0.086 | 0.212 | — |
| chr3_50210570_T_C | chr3:50210570 | -0.215 | -0.320 | -0.224 | — |
| chr3_50210585_G_A | chr3:50210585 | -0.215 | 0.150 | 0.271 | — |
| chr3_50176653_G_T | chr3:50176653 | 0.045 | 0.098 | 0.376 | — |
| chr3_50210588_T_A | chr3:50210588 | 0.148 | -0.371 | -0.376 | — |
| chr3_50206168_C_G | chr3:50206168 | 0.211 | 0.175 | 0.224 | — |
| chr3_50210537_C_G | chr3:50210537 | -0.211 | -0.350 | -0.188 | — |
| chr3_50206179_G_A | chr3:50206179 | 0.210 | 0.201 | 0.118 | — |
| chr3_50206193_G_T | chr3:50206193 | -0.208 | -0.310 | -0.129 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.