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SLC43A2
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SLC43A2
chr17:1,469,253..1,728,834, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_1484875_C_T | chr17:1484875 | 0.659 | 0.798 | 1.000 | <0.001% |
| chr17_1485467_G_C | chr17:1485467 | 0.769 | 0.365 | 0.260 | 0.0053% |
| chr17_1486191_T_A | chr17:1486191 | 0.484 | 0.533 | 1.000 | — |
| chr17_1486195_C_G | chr17:1486195 | 0.444 | 0.511 | 1.000 | — |
| chr17_1486202_G_C | chr17:1486202 | 0.242 | 0.230 | 0.824 | 0.0039% |
| chr17_1486196_A_C | chr17:1486196 | 0.193 | 0.270 | 0.794 | — |
| chr17_1486196_A_G | chr17:1486196 | 0.146 | 0.183 | 0.794 | — |
| chr17_1486200_A_C | chr17:1486200 | 0.226 | 0.221 | 0.788 | — |
| chr17_1486165_C_T | chr17:1486165 | 0.434 | 0.183 | 0.271 | 0.0046% |
| chr17_1486197_A_T | chr17:1486197 | -0.156 | -0.192 | -0.741 | — |
| chr17_1486200_A_G | chr17:1486200 | 0.173 | 0.154 | 0.729 | 0.0026% |
| chr17_1486194_C_G | chr17:1486194 | 0.379 | 0.254 | 0.718 | — |
| chr17_1486202_G_T | chr17:1486202 | 0.220 | 0.230 | 0.718 | — |
| chr17_1486099_C_T | chr17:1486099 | -0.397 | -0.226 | -0.165 | — |
| chr17_1486198_A_G | chr17:1486198 | 0.105 | 0.152 | 0.688 | — |
| chr17_1486121_C_A | chr17:1486121 | 0.366 | 0.338 | 0.585 | — |
| chr17_1486198_A_C | chr17:1486198 | 0.173 | 0.184 | 0.629 | — |
| chr17_1486171_A_T | chr17:1486171 | 0.281 | 0.148 | 0.612 | — |
| chr17_1486199_T_C | chr17:1486199 | 0.118 | 0.141 | 0.565 | — |
| chr17_1486079_C_G | chr17:1486079 | 0.307 | 0.156 | -0.104 | — |
| chr17_1486203_G_C | chr17:1486203 | 0.156 | 0.171 | 0.541 | — |
| chr17_1486259_C_T | chr17:1486259 | 0.016 | -0.036 | 0.541 | — |
| chr17_1485666_C_T | chr17:1485666 | 0.079 | 0.050 | 0.540 | <0.001% |
| chr17_1485679_C_T | chr17:1485679 | 0.085 | 0.063 | 0.533 | 15.5% |
| chr17_1486197_A_C | chr17:1486197 | 0.084 | 0.129 | 0.529 | — |
| chr17_1486099_C_G | chr17:1486099 | -0.297 | -0.117 | -0.421 | — |
| chr17_1486082_C_G | chr17:1486082 | -0.289 | -0.078 | -0.368 | — |
| chr17_1486203_G_T | chr17:1486203 | 0.138 | 0.179 | 0.506 | — |
| chr17_1473350_A_C | chr17:1473350 | 0.233 | 0.209 | 0.494 | 0.0039% |
| chr17_1486115_C_G | chr17:1486115 | -0.279 | -0.147 | -0.106 | — |
| chr17_1486223_G_A | chr17:1486223 | -0.279 | -0.165 | -0.271 | <0.001% |
| chr17_1484958_C_A | chr17:1484958 | 0.216 | 0.052 | 0.488 | <0.001% |
| chr17_1486203_G_A | chr17:1486203 | 0.101 | 0.143 | 0.482 | — |
| chr17_1485538_T_A | chr17:1485538 | -0.051 | -0.029 | -0.479 | 0.0013% |
| chr17_1486090_G_C | chr17:1486090 | 0.269 | 0.113 | 0.169 | — |
| chr17_1485928_G_A | chr17:1485928 | 0.086 | 0.059 | 0.473 | <0.001% |
| chr17_1484839_G_A | chr17:1484839 | 0.193 | 0.245 | 0.471 | <0.001% |
| chr17_1486174_G_T | chr17:1486174 | -0.118 | -0.072 | -0.471 | — |
| chr17_1486201_C_A | chr17:1486201 | -0.052 | -0.098 | -0.471 | — |
| chr17_1486198_A_T | chr17:1486198 | 0.136 | 0.152 | 0.465 | — |
| chr17_1486174_G_A | chr17:1486174 | -0.140 | -0.080 | -0.447 | — |
| chr17_1486185_A_G | chr17:1486185 | 0.052 | 0.161 | 0.447 | 0.0013% |
| chr17_1486199_T_G | chr17:1486199 | 0.089 | 0.113 | 0.447 | — |
| chr17_1486118_G_T | chr17:1486118 | 0.161 | 0.125 | 0.438 | — |
| chr17_1486129_A_T | chr17:1486129 | -0.141 | -0.110 | -0.438 | — |
| chr17_1486221_C_G | chr17:1486221 | -0.247 | -0.093 | -0.282 | — |
| chr17_1484891_C_G | chr17:1484891 | -0.040 | 0.004 | 0.435 | 0.0033% |
| chr17_1486200_A_T | chr17:1486200 | 0.076 | 0.096 | 0.435 | — |
| chr17_1486202_G_A | chr17:1486202 | 0.123 | 0.133 | 0.435 | <0.001% |
| chr17_1485542_C_T | chr17:1485542 | 0.012 | 0.025 | 0.426 | 0.0085% |
| chr17_1473474_A_G | chr17:1473474 | -0.051 | -0.110 | -0.424 | <0.001% |
| chr17_1486268_C_A | chr17:1486268 | 0.067 | 0.131 | 0.424 | — |
| chr17_1485952_G_T | chr17:1485952 | 0.171 | 0.068 | 0.419 | <0.001% |
| chr17_1486164_T_C | chr17:1486164 | -0.110 | -0.117 | -0.418 | — |
| chr17_1486223_G_C | chr17:1486223 | -0.235 | -0.122 | -0.165 | — |
| chr17_1486197_A_G | chr17:1486197 | 0.060 | 0.109 | 0.412 | — |
| chr17_1486201_C_T | chr17:1486201 | -0.048 | -0.090 | -0.412 | — |
| chr17_1486094_C_G | chr17:1486094 | -0.054 | -0.060 | -0.410 | — |
| chr17_1485072_C_G | chr17:1485072 | 0.163 | 0.041 | -0.406 | <0.001% |
| chr17_1486115_C_A | chr17:1486115 | -0.224 | -0.138 | -0.079 | — |
| chr17_1484973_A_C | chr17:1484973 | -0.030 | 0.042 | -0.394 | <0.001% |
| chr17_1486166_C_A | chr17:1486166 | 0.166 | 0.064 | 0.394 | — |
| chr17_1486193_T_C | chr17:1486193 | -0.136 | -0.119 | -0.394 | — |
| chr17_1473344_T_C | chr17:1473344 | -0.114 | -0.071 | -0.388 | <0.001% |
| chr17_1486223_G_T | chr17:1486223 | -0.219 | -0.115 | -0.141 | — |
| chr17_1486136_T_C | chr17:1486136 | 0.216 | 0.157 | 0.268 | — |
| chr17_1485557_C_A | chr17:1485557 | -0.074 | -0.038 | 0.381 | 0.0013% |
| chr17_1486194_C_A | chr17:1486194 | 0.156 | 0.109 | 0.376 | — |
| chr17_1484755_G_A | chr17:1484755 | -0.211 | -0.164 | -0.371 | <0.001% |
| chr17_1486217_C_T | chr17:1486217 | 0.210 | 0.131 | 0.094 | — |
| chr17_1485528_C_T | chr17:1485528 | 0.075 | 0.077 | 0.365 | <0.001% |
| chr17_1486159_T_C | chr17:1486159 | -0.123 | -0.117 | -0.365 | — |
| chr17_1486177_A_T | chr17:1486177 | -0.180 | -0.082 | -0.365 | — |
| chr17_1485464_C_T | chr17:1485464 | -0.205 | -0.246 | -0.191 | <0.001% |
| chr17_1486129_A_G | chr17:1486129 | 0.131 | 0.050 | -0.362 | — |
| chr17_1486078_G_C | chr17:1486078 | 0.071 | 0.020 | -0.360 | — |
| chr17_1486117_G_C | chr17:1486117 | 0.202 | 0.109 | 0.069 | — |
| chr17_1486126_G_A | chr17:1486126 | -0.088 | -0.081 | -0.353 | — |
| chr17_1486142_T_C | chr17:1486142 | -0.070 | -0.005 | -0.353 | — |
| chr17_1486251_C_A | chr17:1486251 | 0.200 | 0.142 | 0.188 | — |
| chr17_1486152_C_G | chr17:1486152 | 0.199 | 0.090 | 0.224 | — |
| chr17_1484758_G_A | chr17:1484758 | -0.198 | -0.174 | -0.312 | 0.0033% |
| chr17_1486220_G_A | chr17:1486220 | -0.196 | -0.077 | -0.188 | — |
| chr17_1485012_G_A | chr17:1485012 | 0.193 | 0.076 | 0.182 | <0.001% |
| chr17_1485533_C_T | chr17:1485533 | -0.010 | 0.042 | 0.338 | 0.0020% |
| chr17_1486222_G_C | chr17:1486222 | -0.191 | -0.133 | -0.271 | 0.0013% |
| chr17_1485358_G_A | chr17:1485358 | -0.138 | -0.143 | -0.335 | 0.0078% |
| chr17_1485445_C_A | chr17:1485445 | -0.190 | -0.259 | -0.043 | <0.001% |
| chr17_1486176_T_G | chr17:1486176 | -0.190 | -0.089 | -0.235 | — |
| chr17_1485694_C_T | chr17:1485694 | 0.002 | 0.050 | 0.332 | <0.001% |
| chr17_1484813_A_G | chr17:1484813 | 0.101 | 0.095 | 0.329 | 0.0039% |
| chr17_1486222_G_A | chr17:1486222 | -0.186 | -0.081 | -0.271 | — |
| chr17_1486238_G_T | chr17:1486238 | 0.171 | 0.146 | 0.329 | — |
| chr17_1486225_G_C | chr17:1486225 | -0.185 | -0.085 | -0.176 | — |
| chr17_1485946_G_C | chr17:1485946 | 0.064 | 0.051 | 0.322 | 0.0099% |
| chr17_1486220_G_T | chr17:1486220 | -0.182 | -0.082 | -0.129 | — |
| chr17_1486003_G_A | chr17:1486003 | -0.091 | -0.037 | -0.320 | 0.016% |
| chr17_1484953_G_T | chr17:1484953 | 0.180 | 0.069 | 0.000 | 0.028% |
| chr17_1486177_A_C | chr17:1486177 | -0.180 | -0.034 | -0.265 | — |
| chr17_1486224_A_G | chr17:1486224 | -0.047 | -0.063 | -0.318 | — |
| chr17_1486079_C_A | chr17:1486079 | 0.179 | 0.135 | 0.057 | — |
| chr17_1486220_G_C | chr17:1486220 | -0.179 | -0.105 | -0.282 | — |
| chr17_1486224_A_T | chr17:1486224 | -0.178 | -0.104 | -0.141 | — |
| chr17_1486125_A_C | chr17:1486125 | 0.176 | 0.124 | 0.276 | — |
| chr17_1486183_A_T | chr17:1486183 | 0.084 | 0.195 | 0.312 | — |
| chr17_1486217_C_G | chr17:1486217 | 0.176 | 0.124 | -0.024 | — |
| chr17_1486224_A_C | chr17:1486224 | -0.174 | -0.142 | -0.247 | — |
| chr17_1485459_C_G | chr17:1485459 | 0.173 | 0.224 | 0.156 | 0.0079% |
| chr17_1486082_C_T | chr17:1486082 | -0.173 | -0.079 | -0.181 | 0.0026% |
| chr17_1486124_G_C | chr17:1486124 | 0.087 | 0.068 | 0.306 | — |
| chr17_1486170_G_T | chr17:1486170 | 0.113 | 0.058 | 0.306 | — |
| chr17_1486177_A_G | chr17:1486177 | -0.173 | -0.066 | -0.259 | — |
| chr17_1486237_C_G | chr17:1486237 | -0.149 | -0.047 | -0.306 | — |
| chr17_1486117_G_A | chr17:1486117 | 0.172 | 0.105 | 0.028 | 0.0033% |
| chr17_1486222_G_T | chr17:1486222 | -0.172 | -0.113 | -0.247 | — |
| chr17_1486116_G_C | chr17:1486116 | 0.171 | 0.112 | 0.229 | — |
| chr17_1485556_C_T | chr17:1485556 | -0.048 | -0.015 | 0.301 | <0.001% |
| chr17_1484794_G_C | chr17:1484794 | -0.108 | -0.136 | -0.300 | <0.001% |
| chr17_1486146_C_G | chr17:1486146 | -0.065 | -0.009 | 0.300 | — |
| chr17_1486180_A_C | chr17:1486180 | 0.085 | 0.160 | 0.300 | — |
| chr17_1485510_C_T | chr17:1485510 | 0.045 | 0.129 | 0.297 | <0.001% |
| chr17_1486100_G_A | chr17:1486100 | 0.017 | -0.012 | 0.294 | — |
| chr17_1486120_C_T | chr17:1486120 | 0.166 | 0.138 | 0.212 | — |
| chr17_1486189_A_C | chr17:1486189 | -0.121 | -0.105 | -0.294 | — |
| chr17_1486195_C_A | chr17:1486195 | 0.103 | 0.138 | 0.294 | — |
| chr17_1486226_C_G | chr17:1486226 | -0.142 | -0.085 | -0.294 | — |
| chr17_1486251_C_G | chr17:1486251 | 0.132 | 0.047 | 0.294 | — |
| chr17_1485103_C_A | chr17:1485103 | -0.165 | -0.079 | 0.224 | 0.0013% |
| chr17_1486122_C_T | chr17:1486122 | 0.164 | 0.084 | 0.026 | — |
| chr17_1486147_C_A | chr17:1486147 | -0.164 | -0.096 | 0.035 | — |
| chr17_1485462_G_A | chr17:1485462 | -0.163 | -0.236 | -0.217 | 0.0013% |
| chr17_1485979_A_T | chr17:1485979 | -0.084 | -0.110 | -0.287 | 0.0013% |
| chr17_1486074_C_G | chr17:1486074 | 0.063 | 0.082 | 0.287 | — |
| chr17_1485716_C_T | chr17:1485716 | 0.038 | 0.041 | 0.286 | <0.001% |
| chr17_1485952_G_A | chr17:1485952 | 0.116 | 0.049 | 0.285 | <0.001% |
| chr17_1486181_A_C | chr17:1486181 | -0.158 | -0.051 | -0.282 | — |
| chr17_1486204_C_T | chr17:1486204 | -0.036 | -0.079 | -0.282 | — |
| chr17_1486265_G_T | chr17:1486265 | 0.050 | 0.082 | 0.282 | — |
| chr17_1485977_C_G | chr17:1485977 | 0.015 | -0.085 | -0.281 | <0.001% |
| chr17_1486117_G_T | chr17:1486117 | 0.159 | 0.146 | 0.175 | — |
| chr17_1486219_G_C | chr17:1486219 | -0.159 | -0.089 | -0.129 | — |
| chr17_1486045_C_T | chr17:1486045 | -0.106 | -0.107 | -0.279 | <0.001% |
| chr17_1486144_C_G | chr17:1486144 | 0.158 | 0.056 | 0.212 | — |
| chr17_1486147_C_G | chr17:1486147 | -0.158 | -0.074 | 0.112 | — |
| chr17_1486092_C_G | chr17:1486092 | -0.096 | -0.058 | -0.279 | — |
| chr17_1486126_G_C | chr17:1486126 | -0.037 | -0.073 | -0.276 | — |
| chr17_1486131_C_G | chr17:1486131 | -0.156 | -0.071 | -0.162 | — |
| chr17_1486122_C_G | chr17:1486122 | 0.084 | 0.095 | 0.274 | — |
| chr17_1486154_C_G | chr17:1486154 | 0.155 | 0.131 | 0.253 | — |
| chr17_1486148_A_G | chr17:1486148 | -0.154 | -0.057 | 0.029 | — |
| chr17_1484775_G_A | chr17:1484775 | 0.040 | 0.124 | 0.271 | 0.0020% |
| chr17_1486191_T_G | chr17:1486191 | 0.036 | 0.088 | 0.271 | — |
| chr17_1486225_G_A | chr17:1486225 | -0.127 | -0.048 | -0.271 | — |
| chr17_1485701_C_A | chr17:1485701 | 0.016 | 0.023 | 0.268 | <0.001% |
| chr17_1485731_G_A | chr17:1485731 | 0.022 | 0.033 | 0.268 | 0.0013% |
| chr17_1484959_C_T | chr17:1484959 | -0.151 | -0.084 | 0.141 | <0.001% |
| chr17_1486059_G_C | chr17:1486059 | -0.034 | -0.061 | -0.268 | <0.001% |
| chr17_1486129_A_C | chr17:1486129 | -0.004 | -0.025 | -0.268 | — |
| chr17_1486137_T_G | chr17:1486137 | -0.001 | -0.037 | -0.268 | — |
| chr17_1486121_C_G | chr17:1486121 | 0.131 | 0.102 | 0.265 | — |
| chr17_1486170_G_A | chr17:1486170 | 0.100 | 0.100 | 0.265 | — |
| chr17_1486175_T_G | chr17:1486175 | -0.052 | -0.030 | 0.265 | — |
| chr17_1486073_A_C | chr17:1486073 | -0.050 | -0.030 | -0.264 | — |
| chr17_1486084_G_T | chr17:1486084 | 0.090 | 0.023 | 0.263 | — |
| chr17_1486176_T_A | chr17:1486176 | -0.148 | -0.079 | -0.206 | — |
| chr17_1486116_G_A | chr17:1486116 | 0.147 | 0.081 | -0.006 | <0.001% |
| chr17_1486116_G_T | chr17:1486116 | 0.147 | 0.092 | 0.168 | — |
| chr17_1484776_G_A | chr17:1484776 | 0.047 | 0.079 | 0.259 | <0.001% |
| chr17_1485108_G_A | chr17:1485108 | -0.146 | -0.082 | 0.235 | <0.001% |
| chr17_1486169_G_T | chr17:1486169 | 0.103 | 0.067 | 0.259 | — |
| chr17_1486204_C_G | chr17:1486204 | 0.143 | 0.109 | 0.259 | — |
| chr17_1486252_C_A | chr17:1486252 | 0.076 | 0.044 | 0.259 | — |
| chr17_1485808_C_T | chr17:1485808 | 0.146 | 0.023 | 0.205 | <0.001% |
| chr17_1486144_C_A | chr17:1486144 | 0.145 | 0.049 | 0.165 | — |
| chr17_1484837_C_T | chr17:1484837 | -0.118 | -0.091 | -0.253 | <0.001% |
| chr17_1485093_T_G | chr17:1485093 | -0.037 | -0.063 | 0.253 | <0.001% |
| chr17_1485335_G_T | chr17:1485335 | -0.067 | -0.072 | -0.253 | 0.0053% |
| chr17_1486130_G_T | chr17:1486130 | 0.022 | -0.023 | -0.253 | — |
| chr17_1486184_G_T | chr17:1486184 | -0.057 | -0.015 | -0.253 | — |
| chr17_1486194_C_T | chr17:1486194 | 0.108 | 0.104 | 0.253 | — |
| chr17_1486103_C_G | chr17:1486103 | 0.142 | 0.009 | 0.051 | — |
| chr17_1485105_G_C | chr17:1485105 | -0.073 | -0.038 | 0.247 | <0.001% |
| chr17_1485185_A_G | chr17:1485185 | 0.140 | -0.032 | -0.071 | <0.001% |
| chr17_1486153_C_G | chr17:1486153 | 0.082 | 0.057 | 0.247 | — |
| chr17_1485053_A_C | chr17:1485053 | -0.138 | -0.024 | -0.035 | <0.001% |
| chr17_1485366_G_T | chr17:1485366 | -0.136 | -0.151 | -0.244 | 0.0013% |
| chr17_1486167_C_A | chr17:1486167 | 0.138 | 0.097 | 0.241 | — |
| chr17_1486219_G_T | chr17:1486219 | -0.138 | -0.076 | -0.035 | — |
| chr17_1486196_A_T | chr17:1486196 | 0.137 | 0.112 | 0.176 | — |
| chr17_1485032_T_C | chr17:1485032 | 0.037 | -0.006 | 0.241 | 0.0013% |
| chr17_1485946_G_A | chr17:1485946 | 0.050 | 0.042 | 0.239 | <0.001% |
| chr17_1485362_G_T | chr17:1485362 | 0.135 | 0.058 | 0.168 | 0.020% |
| chr17_1486140_C_T | chr17:1486140 | -0.128 | -0.062 | -0.238 | — |
| chr17_1485510_C_A | chr17:1485510 | -0.038 | -0.006 | 0.237 | <0.001% |
| chr17_1486109_G_T | chr17:1486109 | -0.122 | -0.059 | -0.235 | — |
| chr17_1486119_T_A | chr17:1486119 | 0.101 | 0.081 | 0.235 | — |
| chr17_1486126_G_T | chr17:1486126 | -0.066 | -0.071 | -0.235 | — |
| chr17_1486162_A_T | chr17:1486162 | 0.082 | 0.079 | 0.235 | — |
| chr17_1486215_G_A | chr17:1486215 | 0.042 | 0.074 | 0.235 | — |
| chr17_1486231_T_A | chr17:1486231 | 0.047 | 0.034 | 0.235 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.