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SLC49A3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SLC49A3
chr4:581,828..789,151, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr4_602840_G_A | chr4:602840 | -20,224 | -4,368 | -24,000 | 1.3e-5 |
| chr4_602843_T_A | chr4:602843 | 18,080 | 2,816 | 12,544 | 6.6e-6 |
| chr4_610654_C_T | chr4:610654 | -13,088 | -3,152 | -11,776 | 6.6e-6 |
| chr4_602842_G_A | chr4:602842 | 11,072 | 912 | 5,888 | 1.1e-1 |
| chr4_617922_C_T | chr4:617922 | 10,688 | 2,880 | 14,976 | 6.6e-6 |
| chr4_610884_G_C | chr4:610884 | -10,464 | -2,800 | -12,672 | 6.6e-6 |
| chr4_602842_G_T | chr4:602842 | -10,304 | -2,640 | -15,936 | 6.6e-6 |
| chr4_602838_T_A | chr4:602838 | -10,080 | -2,704 | -11,904 | 6.6e-6 |
| chr4_602852_C_G | chr4:602852 | -9,312 | -2,144 | -10,048 | 6.6e-6 |
| chr4_610901_G_A | chr4:610901 | -8,928 | -1,376 | -23,040 | 6.6e-6 |
| chr4_610932_C_A | chr4:610932 | 8,352 | 2,496 | 26,496 | 6.6e-6 |
| chr4_602908_C_T | chr4:602908 | 8,160 | 1,888 | 12,544 | 2.0e-5 |
| chr4_610740_G_T | chr4:610740 | -7,200 | -2,224 | -2,944 | 6.6e-6 |
| chr4_610764_C_T | chr4:610764 | 6,976 | 2,032 | 5,888 | 2.0e-5 |
| chr4_610753_C_T | chr4:610753 | 6,912 | 2,528 | 7,936 | 6.6e-6 |
| chr4_602819_T_C | chr4:602819 | -6,784 | -2,160 | -7,872 | 3.3e-5 |
| chr4_610813_C_T | chr4:610813 | 6,176 | 1,504 | 5,632 | 6.6e-6 |
| chr4_610885_G_C | chr4:610885 | -6,048 | -1,472 | -11,648 | 3.9e-5 |
| chr4_610722_A_G | chr4:610722 | 5,760 | 1,424 | 5,376 | 1.3e-5 |
| chr4_602935_C_A | chr4:602935 | 5,568 | 1,280 | 5,632 | 1.3e-5 |
| chr4_610694_C_G | chr4:610694 | -5,472 | -1,520 | -4,096 | 9.9e-5 |
| chr4_611014_G_A | chr4:611014 | 5,312 | 688 | 11,392 | 6.6e-6 |
| chr4_610956_G_T | chr4:610956 | -4,832 | -512 | -9,728 | 1.1e-4 |
| chr4_617828_A_G | chr4:617828 | 4,768 | 2,080 | 5,248 | 6.6e-6 |
| chr4_610615_G_A | chr4:610615 | -4,736 | -800 | -4,608 | 3.2e-4 |
| chr4_602855_T_C | chr4:602855 | -4,512 | -608 | -3,520 | 6.6e-6 |
| chr4_617882_C_A | chr4:617882 | 4,352 | 1,632 | 6,016 | 6.6e-6 |
| chr4_602859_G_C | chr4:602859 | 4,032 | 896 | 3,008 | 3.9e-5 |
| chr4_602841_C_T | chr4:602841 | -3,968 | -1,360 | -8,128 | 6.6e-6 |
| chr4_610966_C_G | chr4:610966 | -3,872 | -816 | -7,424 | 6.6e-6 |
| chr4_602844_G_A | chr4:602844 | 3,808 | 944 | 2,816 | 2.0e-5 |
| chr4_618085_A_G | chr4:618085 | 3,808 | 528 | 256 | 6.6e-6 |
| chr4_610610_G_T | chr4:610610 | -3,456 | -1,360 | -5,888 | 6.6e-6 |
| chr4_610808_A_G | chr4:610808 | -3,424 | -992 | -4,864 | 6.6e-6 |
| chr4_610958_A_C | chr4:610958 | -3,424 | -720 | -3,072 | 6.6e-6 |
| chr4_610734_A_G | chr4:610734 | -3,392 | -656 | -256 | 2.8e-4 |
| chr4_618027_C_G | chr4:618027 | 3,328 | 736 | 7,552 | 1.3e-5 |
| chr4_610707_G_T | chr4:610707 | -3,328 | -1,136 | -6,016 | 6.6e-6 |
| chr4_610840_G_A | chr4:610840 | 3,264 | 656 | 3,712 | 1.2e-4 |
| chr4_633999_T_G | chr4:633999 | -3,232 | -3,240 | -17,120 | — |
| chr4_618148_G_C | chr4:618148 | 3,200 | 1,376 | 3,456 | 6.6e-6 |
| chr4_602810_C_G | chr4:602810 | 3,168 | 656 | 3,840 | 6.6e-6 |
| chr4_610924_A_G | chr4:610924 | 3,136 | 1,264 | 5,504 | 1.3e-5 |
| chr4_602775_A_C | chr4:602775 | -3,136 | -816 | -1,664 | 2.9e-4 |
| chr4_610819_T_C | chr4:610819 | 3,136 | 320 | 3,072 | 4.1e-4 |
| chr4_617937_A_T | chr4:617937 | -3,104 | -1,792 | -7,680 | 5.2e-3 |
| chr4_610735_C_T | chr4:610735 | -3,072 | -1,088 | -3,200 | 2.6e-5 |
| chr4_617833_C_G | chr4:617833 | -3,040 | -1,088 | -3,584 | 6.6e-6 |
| chr4_610899_G_A | chr4:610899 | 2,944 | 624 | 5,376 | 1.0e-3 |
| chr4_617899_A_G | chr4:617899 | -2,944 | -784 | -4,736 | 2.6e-2 |
| chr4_582137_T_C | chr4:582137 | 2,944 | 1,888 | 3,072 | 6.6e-6 |
| chr4_610966_C_T | chr4:610966 | -2,912 | -656 | -6,528 | 6.6e-6 |
| chr4_602796_C_G | chr4:602796 | 2,912 | 320 | 2,048 | 3.9e-5 |
| chr4_618085_A_C | chr4:618085 | 2,816 | -16 | -1,216 | 6.6e-6 |
| chr4_617884_A_G | chr4:617884 | -2,784 | -992 | -3,712 | 2.4e-2 |
| chr4_617941_T_G | chr4:617941 | -2,784 | -640 | -1,408 | 6.6e-6 |
| chr4_617996_G_A | chr4:617996 | 2,752 | 960 | 8,704 | 3.1e-3 |
| chr4_582086_A_G | chr4:582086 | -2,752 | -1,152 | -7,744 | 6.6e-6 |
| chr4_617995_C_T | chr4:617995 | 2,656 | 800 | 7,488 | 2.0e-5 |
| chr4_610659_G_T | chr4:610659 | -2,656 | -512 | -3,968 | 6.6e-6 |
| chr4_610787_A_G | chr4:610787 | 2,624 | 992 | 5,888 | 6.6e-6 |
| chr4_602829_G_A | chr4:602829 | -2,592 | -528 | -3,136 | 6.6e-6 |
| chr4_617857_C_T | chr4:617857 | -2,528 | -720 | -3,456 | 6.6e-6 |
| chr4_617944_G_A | chr4:617944 | 2,496 | 1,024 | 5,376 | 1.3e-5 |
| chr4_617837_C_G | chr4:617837 | -2,464 | -1,248 | -4,288 | 1.3e-5 |
| chr4_582144_T_C | chr4:582144 | 2,464 | 1,344 | 1,920 | 3.9e-5 |
| chr4_617860_G_T | chr4:617860 | -2,432 | -432 | -3,072 | 6.6e-6 |
| chr4_610659_G_A | chr4:610659 | -2,400 | -128 | -1,152 | 2.2e-4 |
| chr4_617850_C_T | chr4:617850 | -2,336 | -208 | -4,480 | 6.6e-6 |
| chr4_618079_T_C | chr4:618079 | -2,336 | -128 | 1,344 | 6.6e-6 |
| chr4_610788_T_C | chr4:610788 | 2,304 | 672 | 3,840 | 6.6e-6 |
| chr4_610644_C_G | chr4:610644 | -2,304 | -624 | -896 | 6.6e-6 |
| chr4_610986_G_A | chr4:610986 | -2,272 | -704 | -3,200 | 1.8e-4 |
| chr4_602890_G_C | chr4:602890 | -2,208 | -368 | -1,856 | 6.6e-6 |
| chr4_610747_G_A | chr4:610747 | -2,208 | -704 | -1,408 | 6.6e-6 |
| chr4_617866_C_G | chr4:617866 | 2,176 | 624 | 4,224 | 6.6e-6 |
| chr4_617918_G_A | chr4:617918 | -2,144 | -608 | -4,224 | 2.0e-5 |
| chr4_602786_A_G | chr4:602786 | 2,144 | 96 | 1,664 | 1.3e-5 |
| chr4_610972_C_G | chr4:610972 | -2,144 | -464 | -2,048 | 7.9e-5 |
| chr4_617844_C_T | chr4:617844 | -2,112 | -1,152 | -4,736 | 1.3e-5 |
| chr4_610880_C_A | chr4:610880 | 2,080 | 1,984 | -7,040 | 1.3e-5 |
| chr4_618090_C_G | chr4:618090 | 2,048 | 928 | 5,056 | 6.6e-6 |
| chr4_610522_T_G | chr4:610522 | 2,048 | 112 | 3,456 | 1.3e-5 |
| chr4_610975_C_T | chr4:610975 | -1,984 | -416 | -5,376 | 3.9e-5 |
| chr4_610810_C_A | chr4:610810 | -1,984 | -608 | -1,536 | 1.3e-5 |
| chr4_602920_G_A | chr4:602920 | -1,952 | 80 | -1,280 | 6.6e-6 |
| chr4_602881_C_T | chr4:602881 | 1,920 | 624 | 1,088 | 1.1e-4 |
| chr4_610557_A_C | chr4:610557 | -1,856 | -480 | -2,432 | 1.3e-5 |
| chr4_602729_G_C | chr4:602729 | 1,824 | 256 | 4,480 | 6.6e-6 |
| chr4_581879_T_G | chr4:581879 | -1,824 | -704 | -832 | 6.6e-6 |
| chr4_582158_T_C | chr4:582158 | -1,824 | -880 | -800 | 6.6e-6 |
| chr4_610594_C_T | chr4:610594 | -1,824 | -400 | -1,280 | 1.3e-5 |
| chr4_610699_C_G | chr4:610699 | 1,792 | 624 | 2,560 | 3.9e-5 |
| chr4_602891_G_A | chr4:602891 | -1,792 | -256 | -2,176 | 6.6e-6 |
| chr4_602797_A_G | chr4:602797 | 1,792 | 240 | 1,792 | 6.6e-6 |
| chr4_610935_T_C | chr4:610935 | 1,728 | 512 | 4,480 | 1.3e-5 |
| chr4_610850_G_A | chr4:610850 | 1,728 | 80 | 3,584 | 6.6e-6 |
| chr4_602895_C_T | chr4:602895 | 1,664 | 688 | 2,048 | 6.6e-6 |
| chr4_617814_A_G | chr4:617814 | 1,600 | 80 | 5,632 | 6.6e-6 |
| chr4_610784_A_G | chr4:610784 | 1,600 | 384 | 1,920 | 6.6e-6 |
| chr4_617834_G_C | chr4:617834 | -1,568 | -1,056 | -3,456 | 2.6e-5 |
| chr4_582031_C_T | chr4:582031 | -1,568 | -1,248 | -3,200 | 6.6e-6 |
| chr4_617817_T_C | chr4:617817 | 1,536 | 576 | 4,352 | 1.3e-5 |
| chr4_581919_A_G | chr4:581919 | 1,536 | 864 | 2,304 | 1.3e-5 |
| chr4_618003_G_A | chr4:618003 | -1,504 | -240 | -5,056 | 1.3e-5 |
| chr4_618024_G_T | chr4:618024 | -1,504 | -240 | -2,048 | 6.6e-6 |
| chr4_617838_G_A | chr4:617838 | 1,472 | 416 | 3,456 | 6.6e-6 |
| chr4_581984_T_C | chr4:581984 | 1,472 | 768 | 2,752 | 1.3e-5 |
| chr4_602878_C_A | chr4:602878 | -1,472 | -272 | -1,792 | 4.0e-4 |
| chr4_617834_G_A | chr4:617834 | -1,440 | -688 | -2,560 | 4.1e-3 |
| chr4_610647_T_A | chr4:610647 | -1,376 | -368 | -2,304 | 6.6e-6 |
| chr4_581925_T_C | chr4:581925 | -1,344 | -1,296 | -1,792 | 6.6e-6 |
| chr4_633994_A_G | chr4:633994 | -1,312 | -1,960 | -9,408 | — |
| chr4_582026_G_C | chr4:582026 | -1,312 | -2,016 | -5,312 | 6.6e-6 |
| chr4_617806_A_C | chr4:617806 | -1,312 | -672 | -4,480 | 6.6e-6 |
| chr4_610897_G_C | chr4:610897 | 1,312 | 688 | -2,304 | 6.6e-6 |
| chr4_610898_C_A | chr4:610898 | -1,312 | -368 | -2,176 | 6.6e-6 |
| chr4_617826_G_T | chr4:617826 | -1,280 | -576 | -3,200 | 6.6e-6 |
| chr4_610562_C_A | chr4:610562 | 1,280 | 864 | 2,688 | 4.3e-4 |
| chr4_633997_A_G | chr4:633997 | -1,248 | -1,752 | -8,256 | — |
| chr4_617800_C_T | chr4:617800 | 1,248 | 128 | 6,272 | 6.6e-6 |
| chr4_610528_C_A | chr4:610528 | -1,248 | -368 | -3,200 | 6.6e-6 |
| chr4_633987_T_G | chr4:633987 | -1,216 | -1,456 | -7,232 | 6.9e-6 |
| chr4_610614_C_T | chr4:610614 | -1,216 | -144 | -2,688 | 1.3e-5 |
| chr4_602765_A_C | chr4:602765 | 1,216 | 112 | 1,792 | 6.6e-6 |
| chr4_610658_C_T | chr4:610658 | 1,152 | 1,328 | 1,920 | 9.9e-5 |
| chr4_610737_A_T | chr4:610737 | 1,120 | 944 | 3,456 | 6.6e-6 |
| chr4_618064_C_T | chr4:618064 | -1,120 | -128 | -1,856 | 6.6e-6 |
| chr4_618074_G_A | chr4:618074 | 1,088 | 544 | 4,672 | 6.6e-6 |
| chr4_618005_A_G | chr4:618005 | -1,088 | -416 | -4,032 | 2.6e-5 |
| chr4_602883_C_A | chr4:602883 | -1,088 | -304 | -2,368 | 1.3e-5 |
| chr4_610964_G_A | chr4:610964 | 896 | 352 | 2,048 | 6.6e-6 |
| chr4_618137_C_T | chr4:618137 | -768 | -544 | -3,584 | 1.3e-5 |
| chr4_618216_C_T | chr4:618216 | -768 | -320 | -1,920 | 6.6e-6 |
| chr4_634011_G_T | chr4:634011 | 736 | 1,632 | 7,744 | — |
| chr4_634007_G_T | chr4:634007 | 704 | 1,552 | 7,552 | — |
| chr4_634010_G_A | chr4:634010 | 704 | 1,280 | 6,400 | — |
| chr4_634006_G_A | chr4:634006 | 704 | 1,280 | 6,272 | — |
| chr4_618165_G_A | chr4:618165 | 704 | 320 | 2,048 | 6.6e-6 |
| chr4_634011_G_C | chr4:634011 | 672 | 1,536 | 8,128 | — |
| chr4_634011_G_A | chr4:634011 | 672 | 1,536 | 7,104 | — |
| chr4_634008_G_C | chr4:634008 | 672 | 1,088 | 6,592 | — |
| chr4_634010_G_T | chr4:634010 | 672 | 1,248 | 6,400 | — |
| chr4_634006_G_T | chr4:634006 | 672 | 1,232 | 5,888 | — |
| chr4_618020_C_T | chr4:618020 | -672 | -64 | -2,304 | 6.6e-5 |
| chr4_582054_G_T | chr4:582054 | -672 | -1,296 | -1,792 | 1.3e-5 |
| chr4_634007_G_C | chr4:634007 | 640 | 1,472 | 7,936 | — |
| chr4_634007_G_A | chr4:634007 | 640 | 1,536 | 7,552 | 6.6e-6 |
| chr4_633989_A_G | chr4:633989 | -640 | -1,312 | -7,488 | — |
| chr4_634008_G_T | chr4:634008 | 640 | 1,120 | 5,696 | — |
| chr4_618059_C_T | chr4:618059 | 608 | 256 | 3,072 | 9.9e-5 |
| chr4_581946_G_T | chr4:581946 | -608 | -896 | -2,240 | 6.6e-6 |
| chr4_634008_G_A | chr4:634008 | 576 | 1,152 | 5,952 | — |
| chr4_634002_G_T | chr4:634002 | 576 | 976 | 4,864 | — |
| chr4_610922_C_T | chr4:610922 | -576 | -144 | -4,608 | 6.6e-6 |
| chr4_618016_G_A | chr4:618016 | -576 | -208 | -2,816 | 6.6e-6 |
| chr4_634006_G_C | chr4:634006 | 544 | 1,184 | 6,528 | — |
| chr4_618013_C_T | chr4:618013 | -544 | 240 | -3,968 | 1.3e-5 |
| chr4_634010_G_C | chr4:634010 | 512 | 1,184 | 6,656 | — |
| chr4_634012_G_A | chr4:634012 | 512 | 1,072 | 4,608 | 1.8e-3 |
| chr4_634012_G_T | chr4:634012 | 480 | 1,136 | 5,248 | 6.6e-6 |
| chr4_611319_G_A | chr4:611319 | 480 | 176 | 2,624 | 2.1e-3 |
| chr4_634004_G_C | chr4:634004 | 416 | 1,072 | 5,888 | — |
| chr4_634004_G_T | chr4:634004 | 416 | 1,072 | 5,504 | 2.0e-5 |
| chr4_618037_T_C | chr4:618037 | 416 | 192 | 3,648 | 1.3e-5 |
| chr4_633998_G_C | chr4:633998 | 416 | 400 | 2,048 | — |
| chr4_634016_C_T | chr4:634016 | -416 | -400 | -1,920 | 1.3e-5 |
| chr4_633985_A_G | chr4:633985 | -384 | -904 | -5,056 | — |
| chr4_581962_C_A | chr4:581962 | 384 | -1,056 | -2,304 | 6.6e-6 |
| chr4_602511_G_T | chr4:602511 | -384 | -48 | -2,176 | 2.6e-5 |
| chr4_634012_G_C | chr4:634012 | 352 | 1,056 | 5,376 | — |
| chr4_634002_G_A | chr4:634002 | 352 | 992 | 4,864 | — |
| chr4_633981_T_G | chr4:633981 | -352 | -616 | -3,776 | — |
| chr4_617996_G_C | chr4:617996 | -352 | -32 | -1,920 | 2.0e-5 |
| chr4_634002_G_C | chr4:634002 | 320 | 1,008 | 5,632 | — |
| chr4_634004_G_A | chr4:634004 | 320 | 1,024 | 5,376 | — |
| chr4_633993_T_G | chr4:633993 | -320 | -616 | -2,688 | — |
| chr4_618026_C_T | chr4:618026 | 320 | 64 | 2,176 | 1.3e-5 |
| chr4_633965_G_C | chr4:633965 | 320 | 128 | 1,856 | — |
| chr4_618007_C_T | chr4:618007 | -288 | -80 | -2,112 | 1.3e-5 |
| chr4_634003_G_A | chr4:634003 | 256 | 1,392 | 6,976 | 6.6e-6 |
| chr4_633961_A_G | chr4:633961 | -256 | -184 | -3,264 | — |
| chr4_582034_T_A | chr4:582034 | -256 | -768 | -2,560 | 6.0e-4 |
| chr4_634018_C_T | chr4:634018 | -256 | -320 | -1,856 | 2.4e-4 |
| chr4_634009_T_A | chr4:634009 | 224 | 624 | 3,264 | — |
| chr4_633962_G_C | chr4:633962 | 224 | 144 | 1,856 | 2.6e-5 |
| chr4_634005_T_A | chr4:634005 | 192 | 720 | 2,880 | — |
| chr4_618066_G_T | chr4:618066 | -192 | 224 | 2,112 | 6.6e-6 |
| chr4_634003_G_T | chr4:634003 | 160 | 1,376 | 6,656 | — |
| chr4_628583_C_G | chr4:628583 | -160 | 0 | -1,920 | 6.6e-6 |
| chr4_610548_C_T | chr4:610548 | -128 | -256 | -1,920 | 6.6e-6 |
| chr4_628554_C_A | chr4:628554 | -128 | -160 | -1,920 | 1.3e-5 |
| chr4_634003_G_C | chr4:634003 | -96 | 1,360 | 7,232 | — |
| chr4_618014_G_A | chr4:618014 | 96 | 176 | 2,048 | 3.3e-3 |
| chr4_634009_T_G | chr4:634009 | 64 | 768 | 2,496 | — |
| chr4_618191_G_T | chr4:618191 | -32 | -224 | -2,176 | 6.6e-6 |
| chr4_634001_A_G | chr4:634001 | -32 | -288 | -2,112 | — |
| chr4_634001_A_T | chr4:634001 | 32 | 336 | 1,856 | — |
| chr4_581878_A_G | chr4:581878 | 0 | -96 | 2,112 | 2.6e-5 |
| chr4_633984_G_C | chr4:633984 | 0 | 256 | 2,112 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.