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SLC6A18
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SLC6A18
chr5:1,125,380..1,346,189, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_1140493_G_A | chr5:1140493 | -93,696 | -13,504 | -67,328 | 1.0e-5 |
| chr5_1140484_C_T | chr5:1140484 | -88,384 | -13,072 | -59,136 | 8.9e-6 |
| chr5_1140485_C_G | chr5:1140485 | -85,184 | -13,008 | -65,408 | 1.8e-5 |
| chr5_1140485_C_T | chr5:1140485 | -83,904 | -12,672 | -61,056 | 9.1e-6 |
| chr5_1138778_G_T | chr5:1138778 | 37,440 | 14,656 | 35,200 | 6.6e-6 |
| chr5_1140472_G_C | chr5:1140472 | -32,064 | -4,256 | -14,080 | 2.4e-4 |
| chr5_1140481_G_A | chr5:1140481 | -22,656 | -3,488 | -9,984 | 7.9e-6 |
| chr5_1130733_A_C | chr5:1130733 | 19,648 | 8,464 | 32,128 | 1.3e-5 |
| chr5_1140501_G_A | chr5:1140501 | 17,024 | 2,784 | 11,264 | 1.7e-4 |
| chr5_1140560_G_A | chr5:1140560 | -16,768 | -2,272 | -4,864 | 6.6e-6 |
| chr5_1140551_C_A | chr5:1140551 | 15,104 | 2,080 | 5,632 | 6.6e-6 |
| chr5_1140498_G_A | chr5:1140498 | 12,032 | 1,664 | 3,584 | 3.2e-5 |
| chr5_1140526_C_A | chr5:1140526 | -11,520 | -1,312 | -3,584 | 2.6e-5 |
| chr5_1161343_A_T | chr5:1161343 | -11,456 | -6,144 | -38,016 | 7.9e-4 |
| chr5_1138712_C_T | chr5:1138712 | 11,296 | 4,752 | 15,232 | 6.6e-6 |
| chr5_1138767_T_C | chr5:1138767 | 10,656 | 4,368 | 9,728 | 6.6e-6 |
| chr5_1142073_G_A | chr5:1142073 | 10,472 | 2,386 | 19,800 | 1.3e-5 |
| chr5_1138716_C_T | chr5:1138716 | 10,336 | 3,968 | 10,752 | 1.3e-5 |
| chr5_1140552_G_A | chr5:1140552 | -10,176 | -1,472 | -7,808 | 3.3e-5 |
| chr5_1140458_C_T | chr5:1140458 | -9,024 | -896 | -3,328 | 1.3e-5 |
| chr5_1138770_A_C | chr5:1138770 | 8,672 | 3,376 | 8,704 | 9.9e-5 |
| chr5_1161369_A_C | chr5:1161369 | -8,128 | -3,072 | -17,280 | 6.6e-6 |
| chr5_1161335_T_A | chr5:1161335 | -8,000 | -4,304 | -7,424 | 6.6e-6 |
| chr5_1142137_C_G | chr5:1142137 | 7,448 | 1,752 | 9,572 | 1.3e-5 |
| chr5_1131104_G_A | chr5:1131104 | 7,424 | 4,048 | 12,160 | 2.3e-3 |
| chr5_1138655_A_C | chr5:1138655 | -7,264 | -1,952 | -3,968 | 6.6e-6 |
| chr5_1140480_G_A | chr5:1140480 | -7,232 | -1,440 | -1,024 | 3.2e-4 |
| chr5_1140611_G_C | chr5:1140611 | -7,168 | -1,216 | -1,536 | 1.9e-4 |
| chr5_1138798_G_A | chr5:1138798 | -7,008 | -3,984 | -8,832 | 6.6e-6 |
| chr5_1140509_C_T | chr5:1140509 | 6,784 | 1,664 | 5,632 | 6.6e-6 |
| chr5_1140583_G_T | chr5:1140583 | 6,720 | 1,248 | 2,816 | 2.0e-5 |
| chr5_1161346_C_T | chr5:1161346 | -6,688 | -5,248 | -26,752 | 1.3e-5 |
| chr5_1138711_G_A | chr5:1138711 | -6,688 | -3,648 | -7,424 | 6.6e-6 |
| chr5_1130860_C_T | chr5:1130860 | 6,528 | 2,800 | 13,568 | 3.9e-5 |
| chr5_1138625_C_T | chr5:1138625 | -6,432 | -2,880 | -6,656 | 1.3e-5 |
| chr5_1130781_G_T | chr5:1130781 | 6,400 | 2,080 | 10,752 | 6.6e-6 |
| chr5_1140401_G_A | chr5:1140401 | -6,400 | -1,088 | 256 | 5.3e-5 |
| chr5_1140615_T_A | chr5:1140615 | -6,400 | -1,088 | -3,072 | 6.6e-6 |
| chr5_1161302_C_A | chr5:1161302 | 6,336 | -592 | 2,048 | 6.6e-6 |
| chr5_1138671_C_T | chr5:1138671 | -6,144 | -2,400 | -5,120 | 2.2e-2 |
| chr5_1140457_G_T | chr5:1140457 | 6,144 | 608 | 1,024 | 6.6e-6 |
| chr5_1138717_G_A | chr5:1138717 | -6,048 | -2,544 | -5,760 | 1.3e-5 |
| chr5_1131128_C_G | chr5:1131128 | 6,016 | 1,568 | 7,680 | 1.4e-1 |
| chr5_1130458_C_T | chr5:1130458 | 5,888 | 3,680 | 25,984 | 6.6e-6 |
| chr5_1140579_T_C | chr5:1140579 | -5,888 | -960 | -2,560 | 1.3e-5 |
| chr5_1138625_C_A | chr5:1138625 | -5,760 | -2,672 | -5,120 | 6.1e-2 |
| chr5_1140555_A_G | chr5:1140555 | -5,696 | -1,024 | 1,024 | 6.6e-6 |
| chr5_1140374_T_A | chr5:1140374 | 5,632 | 544 | 3,328 | 6.6e-6 |
| chr5_1138609_G_A | chr5:1138609 | 5,440 | 1,856 | 3,456 | 3.3e-5 |
| chr5_1140526_C_T | chr5:1140526 | -5,376 | -768 | 768 | 5.4e-4 |
| chr5_1130811_G_T | chr5:1130811 | -5,312 | -1,632 | -6,528 | 6.6e-6 |
| chr5_1140365_G_A | chr5:1140365 | -5,312 | -96 | 2,560 | 5.9e-5 |
| chr5_1141991_C_A | chr5:1141991 | 5,128 | 1,904 | 7,488 | 5.3e-5 |
| chr5_1138603_T_G | chr5:1138603 | -5,088 | -1,808 | -5,376 | 1.3e-5 |
| chr5_1130848_G_A | chr5:1130848 | -5,056 | -1,056 | -2,688 | 2.0e-5 |
| chr5_1130841_T_A | chr5:1130841 | 4,928 | 1,920 | 11,904 | 6.6e-6 |
| chr5_1161332_A_G | chr5:1161332 | -4,928 | -2,960 | 2,560 | 6.6e-6 |
| chr5_1130832_C_A | chr5:1130832 | 4,736 | 2,272 | 9,984 | 1.3e-5 |
| chr5_1130616_A_C | chr5:1130616 | 4,736 | 1,024 | 4,352 | 6.6e-6 |
| chr5_1130729_G_A | chr5:1130729 | -4,736 | -192 | -4,480 | 1.3e-5 |
| chr5_1130807_G_A | chr5:1130807 | -4,672 | -1,616 | -7,680 | 3.9e-5 |
| chr5_1140619_C_T | chr5:1140619 | -4,608 | -992 | -2,304 | 2.0e-5 |
| chr5_1138688_G_A | chr5:1138688 | -4,480 | -1,776 | -6,656 | 6.6e-6 |
| chr5_1140534_C_T | chr5:1140534 | -4,416 | -928 | -2,816 | 1.3e-5 |
| chr5_1161324_C_T | chr5:1161324 | -4,352 | -1,600 | -9,088 | 1.1e-4 |
| chr5_1155999_G_A | chr5:1155999 | 4,288 | 1,302 | 11,600 | 2.0e-5 |
| chr5_1138720_T_C | chr5:1138720 | -4,288 | -1,888 | -4,864 | 4.5e-3 |
| chr5_1140387_T_C | chr5:1140387 | 4,288 | 448 | 1,536 | 5.9e-1 |
| chr5_1140406_T_C | chr5:1140406 | -4,224 | 192 | -4,608 | 6.6e-6 |
| chr5_1140460_G_A | chr5:1140460 | -4,224 | -352 | -3,584 | 6.6e-6 |
| chr5_1130821_T_C | chr5:1130821 | -4,160 | -1,120 | -5,760 | 6.6e-6 |
| chr5_1140367_G_A | chr5:1140367 | -4,160 | -192 | -2,304 | 6.6e-6 |
| chr5_1138559_C_T | chr5:1138559 | 4,128 | 1,440 | 2,432 | 2.8e-3 |
| chr5_1140391_C_T | chr5:1140391 | 4,096 | 96 | 1,792 | 3.9e-5 |
| chr5_1138631_C_G | chr5:1138631 | -4,064 | -2,640 | -4,224 | 1.3e-5 |
| chr5_1140362_C_A | chr5:1140362 | -4,032 | -544 | 1,536 | 6.6e-6 |
| chr5_1130430_A_T | chr5:1130430 | 4,000 | -88 | -3,072 | 6.7e-6 |
| chr5_1161314_C_T | chr5:1161314 | 3,968 | 1,296 | -4,352 | 7.9e-5 |
| chr5_1138757_G_A | chr5:1138757 | 3,936 | 1,312 | 5,248 | 6.6e-6 |
| chr5_1130803_A_C | chr5:1130803 | -3,904 | -1,088 | -512 | 7.9e-5 |
| chr5_1140614_T_C | chr5:1140614 | -3,904 | -560 | -1,024 | 6.6e-6 |
| chr5_1130799_C_T | chr5:1130799 | -3,840 | -1,008 | -5,248 | 5.9e-5 |
| chr5_1138697_G_A | chr5:1138697 | 3,840 | 1,520 | 3,200 | 1.3e-5 |
| chr5_1155577_A_C | chr5:1155577 | 3,792 | 554 | 1,136 | 6.7e-6 |
| chr5_1140551_C_T | chr5:1140551 | -3,776 | -160 | -4,352 | 2.0e-5 |
| chr5_1138792_G_A | chr5:1138792 | 3,776 | 592 | 3,072 | 6.6e-6 |
| chr5_1161350_G_A | chr5:1161350 | -3,776 | -688 | -512 | 2.0e-5 |
| chr5_1155787_G_A | chr5:1155787 | 3,728 | 720 | 3,552 | 1.3e-5 |
| chr5_1140441_G_T | chr5:1140441 | 3,712 | -480 | 5,888 | 6.6e-6 |
| chr5_1161197_G_A | chr5:1161197 | 3,680 | 2,032 | 7,168 | 3.3e-4 |
| chr5_1138605_G_C | chr5:1138605 | -3,648 | -1,216 | -5,504 | 6.6e-6 |
| chr5_1140441_G_A | chr5:1140441 | 3,648 | -544 | 3,840 | 4.6e-5 |
| chr5_1138715_C_A | chr5:1138715 | 3,520 | 752 | 3,328 | 6.6e-6 |
| chr5_1140562_A_C | chr5:1140562 | -3,520 | -416 | -1,024 | 6.6e-6 |
| chr5_1140620_G_A | chr5:1140620 | -3,520 | -272 | -1,280 | 2.3e-3 |
| chr5_1142087_A_G | chr5:1142087 | -3,512 | -1,344 | -5,552 | 3.4e-4 |
| chr5_1130812_A_C | chr5:1130812 | -3,456 | -1,216 | -7,168 | 6.6e-6 |
| chr5_1142135_C_A | chr5:1142135 | 3,440 | 1,052 | 3,728 | 6.6e-6 |
| chr5_1161371_C_G | chr5:1161371 | 3,392 | 624 | 5,888 | 4.6e-5 |
| chr5_1140397_C_T | chr5:1140397 | 3,392 | 384 | 3,584 | 2.6e-5 |
| chr5_1155928_C_T | chr5:1155928 | -3,312 | -702 | -5,232 | 1.4e-5 |
| chr5_1161192_G_A | chr5:1161192 | 3,296 | 2,064 | 7,296 | 8.5e-5 |
| chr5_1142080_G_A | chr5:1142080 | 3,268 | 1,036 | 4,732 | 1.3e-5 |
| chr5_1130449_C_T | chr5:1130449 | 3,200 | 1,936 | 17,408 | 1.6e-3 |
| chr5_1130450_G_T | chr5:1130450 | 3,200 | 208 | 6,656 | 7.9e-6 |
| chr5_1138608_C_T | chr5:1138608 | 3,200 | 768 | 3,968 | 1.3e-4 |
| chr5_1161316_C_A | chr5:1161316 | 3,136 | 208 | -7,424 | 4.6e-5 |
| chr5_1161317_C_T | chr5:1161317 | 3,136 | -32 | -4,480 | 6.6e-6 |
| chr5_1130773_G_A | chr5:1130773 | 3,072 | 416 | 7,040 | 6.6e-6 |
| chr5_1142062_C_T | chr5:1142062 | -3,064 | -1,018 | -4,024 | 9.9e-5 |
| chr5_1155955_G_T | chr5:1155955 | -2,960 | -530 | -4,032 | 1.1e-5 |
| chr5_1142091_C_T | chr5:1142091 | -2,944 | -1,272 | -5,576 | 6.6e-6 |
| chr5_1142079_G_C | chr5:1142079 | 2,932 | 850 | 4,572 | 6.6e-6 |
| chr5_1138481_C_A | chr5:1138481 | 2,912 | 1,376 | 4,224 | 6.6e-6 |
| chr5_1142060_G_A | chr5:1142060 | -2,876 | -1,372 | -4,784 | 6.6e-6 |
| chr5_1142072_G_A | chr5:1142072 | -2,872 | -884 | -3,924 | 1.3e-5 |
| chr5_1142069_G_C | chr5:1142069 | 2,824 | 552 | 12,380 | 6.6e-6 |
| chr5_1130461_A_T | chr5:1130461 | 2,816 | 1,696 | 11,136 | 9.0e-6 |
| chr5_1130861_G_T | chr5:1130861 | -2,816 | -288 | -4,992 | 1.6e-3 |
| chr5_1141991_C_T | chr5:1141991 | 2,792 | 984 | 6,720 | 4.2e-3 |
| chr5_1130514_G_A | chr5:1130514 | 2,784 | 1,200 | 6,656 | 2.0e-5 |
| chr5_1156054_C_G | chr5:1156054 | -2,768 | -1,152 | -4,192 | 1.3e-5 |
| chr5_1155914_C_G | chr5:1155914 | -2,720 | -464 | -5,344 | 6.9e-6 |
| chr5_1161199_A_G | chr5:1161199 | 2,656 | 1,712 | 6,016 | 6.6e-6 |
| chr5_1140581_A_C | chr5:1140581 | 2,624 | 416 | 4,608 | 2.0e-5 |
| chr5_1142097_C_G | chr5:1142097 | 2,624 | 770 | 4,044 | 6.6e-6 |
| chr5_1130769_G_A | chr5:1130769 | 2,560 | 1,264 | 5,504 | 6.6e-6 |
| chr5_1140393_C_T | chr5:1140393 | 2,560 | -256 | 4,352 | 2.6e-5 |
| chr5_1155580_C_T | chr5:1155580 | 2,528 | 754 | 4,272 | 2.0e-5 |
| chr5_1138779_G_A | chr5:1138779 | -2,464 | -1,040 | -3,712 | 6.6e-6 |
| chr5_1155561_C_A | chr5:1155561 | 2,448 | 736 | 3,744 | 1.3e-5 |
| chr5_1161370_C_A | chr5:1161370 | -2,304 | -1,040 | -6,016 | 6.6e-6 |
| chr5_1155350_C_G | chr5:1155350 | 2,272 | 1,340 | 5,152 | 6.6e-6 |
| chr5_1130474_C_T | chr5:1130474 | 2,176 | 1,352 | 8,320 | 6.6e-6 |
| chr5_1138238_G_A | chr5:1138238 | -2,176 | -1,376 | -5,120 | 2.0e-5 |
| chr5_1155579_C_A | chr5:1155579 | 2,096 | 454 | 3,496 | 1.3e-5 |
| chr5_1161382_T_C | chr5:1161382 | -2,048 | -2,528 | -6,400 | 2.0e-5 |
| chr5_1155988_C_T | chr5:1155988 | -2,048 | -548 | -4,160 | 6.6e-6 |
| chr5_1161251_G_A | chr5:1161251 | 2,048 | 672 | 3,584 | 2.6e-5 |
| chr5_1155908_G_A | chr5:1155908 | 2,000 | 700 | 4,384 | 6.6e-6 |
| chr5_1155965_G_C | chr5:1155965 | 1,984 | 284 | 3,472 | 2.0e-5 |
| chr5_1138370_C_G | chr5:1138370 | -1,952 | -512 | -3,968 | 6.6e-6 |
| chr5_1138225_G_A | chr5:1138225 | -1,952 | -912 | -3,456 | 4.6e-5 |
| chr5_1155954_A_T | chr5:1155954 | -1,856 | -560 | -4,704 | 1.2e-5 |
| chr5_1161352_A_G | chr5:1161352 | -1,856 | -784 | -3,968 | 1.3e-5 |
| chr5_1130621_G_T | chr5:1130621 | 1,856 | 416 | 3,840 | 2.0e-4 |
| chr5_1155921_G_A | chr5:1155921 | 1,840 | 476 | 3,616 | 6.6e-6 |
| chr5_1130853_A_C | chr5:1130853 | 1,792 | 160 | 4,992 | 6.6e-6 |
| chr5_1155926_G_A | chr5:1155926 | 1,792 | 558 | 4,112 | 6.7e-6 |
| chr5_1155945_G_A | chr5:1155945 | 1,760 | 1,234 | 7,792 | 7.9e-6 |
| chr5_1130642_C_G | chr5:1130642 | -1,760 | -824 | -7,168 | 1.3e-5 |
| chr5_1130861_G_A | chr5:1130861 | 1,728 | 16 | -4,992 | 3.3e-5 |
| chr5_1130621_G_A | chr5:1130621 | 1,728 | 480 | 4,608 | 2.0e-5 |
| chr5_1130471_A_G | chr5:1130471 | 1,600 | 1,280 | 8,960 | 2.5e-5 |
| chr5_1130457_C_A | chr5:1130457 | 1,600 | 1,008 | 8,448 | 7.5e-6 |
| chr5_1155220_C_T | chr5:1155220 | 1,552 | 520 | 5,568 | 2.0e-5 |
| chr5_1155286_C_G | chr5:1155286 | -1,536 | -744 | -3,744 | 6.6e-6 |
| chr5_1155600_C_T | chr5:1155600 | 1,520 | 602 | 5,504 | 2.0e-5 |
| chr5_1155965_G_A | chr5:1155965 | 1,456 | 250 | 4,192 | 6.6e-6 |
| chr5_1138262_T_G | chr5:1138262 | 1,440 | 1,488 | -4,224 | 1.2e-4 |
| chr5_1161196_C_T | chr5:1161196 | 1,392 | 2,112 | 6,272 | 6.6e-5 |
| chr5_1155221_C_T | chr5:1155221 | 1,376 | 624 | 6,144 | 6.6e-6 |
| chr5_1138617_C_G | chr5:1138617 | -1,312 | 112 | 4,096 | 6.6e-6 |
| chr5_1156232_C_T | chr5:1156232 | 1,216 | 696 | 5,952 | 6.6e-6 |
| chr5_1156026_G_A | chr5:1156026 | 1,216 | 438 | 3,504 | 6.6e-6 |
| chr5_1155631_C_A | chr5:1155631 | 1,200 | 366 | 3,744 | 1.5e-2 |
| chr5_1155910_A_C | chr5:1155910 | -1,184 | -364 | -3,744 | 8.7e-5 |
| chr5_1155993_G_C | chr5:1155993 | 1,152 | 468 | 4,528 | 4.0e-5 |
| chr5_1138551_C_G | chr5:1138551 | 1,152 | 576 | 3,584 | 2.6e-5 |
| chr5_1155605_C_T | chr5:1155605 | 1,120 | 318 | 3,696 | 6.6e-6 |
| chr5_1130912_A_C | chr5:1130912 | -1,088 | -800 | -4,736 | 1.3e-5 |
| chr5_1130775_C_T | chr5:1130775 | -1,088 | -864 | -3,712 | 1.5e-1 |
| chr5_1161253_G_A | chr5:1161253 | -1,056 | -688 | -5,632 | 1.3e-5 |
| chr5_1130776_G_A | chr5:1130776 | 1,024 | 352 | 8,704 | 2.0e-5 |
| chr5_1138196_G_A | chr5:1138196 | 992 | 768 | 3,968 | 1.9e-4 |
| chr5_1130478_C_G | chr5:1130478 | 960 | 1,640 | 11,264 | 8.3e-6 |
| chr5_1130805_G_T | chr5:1130805 | 960 | 608 | 9,088 | 4.6e-5 |
| chr5_1131022_G_A | chr5:1131022 | 960 | 784 | 6,144 | 6.6e-6 |
| chr5_1155556_G_A | chr5:1155556 | 912 | 230 | 4,032 | 2.0e-5 |
| chr5_1130363_C_A | chr5:1130363 | 896 | 256 | 3,968 | 1.3e-5 |
| chr5_1130956_A_G | chr5:1130956 | -896 | -416 | -3,840 | 6.6e-6 |
| chr5_1155342_C_A | chr5:1155342 | 880 | 800 | 6,496 | 1.3e-5 |
| chr5_1161349_C_T | chr5:1161349 | -832 | -848 | -8,192 | 7.2e-5 |
| chr5_1155554_G_A | chr5:1155554 | 704 | 370 | 4,032 | 6.6e-6 |
| chr5_1155549_G_A | chr5:1155549 | 704 | 384 | 3,680 | 6.6e-6 |
| chr5_1161349_C_A | chr5:1161349 | -640 | -544 | -7,936 | 2.0e-5 |
| chr5_1130676_C_G | chr5:1130676 | 576 | 312 | 6,272 | 6.6e-6 |
| chr5_1131021_G_A | chr5:1131021 | 512 | 976 | 6,656 | 1.3e-5 |
| chr5_1155992_C_G | chr5:1155992 | 480 | 200 | 3,856 | 6.7e-6 |
| chr5_1155218_G_C | chr5:1155218 | 448 | 336 | 8,256 | 6.6e-6 |
| chr5_1156017_G_A | chr5:1156017 | 400 | 496 | 4,176 | 3.3e-5 |
| chr5_1155522_G_A | chr5:1155522 | 384 | 360 | 4,000 | 3.3e-5 |
| chr5_1155623_G_T | chr5:1155623 | 256 | 312 | 3,952 | 1.3e-5 |
| chr5_1156002_G_A | chr5:1156002 | 256 | 408 | 3,952 | 3.7e-3 |
| chr5_1161315_G_A | chr5:1161315 | 192 | -416 | -4,864 | 2.2e-4 |
| chr5_1130472_G_C | chr5:1130472 | -192 | -368 | -4,096 | 8.1e-6 |
| chr5_1138198_A_G | chr5:1138198 | -192 | -832 | 3,968 | 3.4e-5 |
| chr5_1130884_G_A | chr5:1130884 | 128 | 176 | 4,864 | 6.6e-6 |
| chr5_1156022_G_A | chr5:1156022 | -48 | 386 | 3,648 | 3.3e-5 |
| chr5_1161311_C_T | chr5:1161311 | 0 | 2,464 | 7,424 | 2.7e-3 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.