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SLC6A19
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SLC6A19
chr5:1,101,594..1,325,111, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_1106106_C_G | chr5:1106106 | -1.000 | -1.000 | -1.000 | 0.0046% |
| chr5_1119537_C_T | chr5:1119537 | 1.000 | 1.000 | 1.000 | 0.0053% |
| chr5_1119638_G_C | chr5:1119638 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr5_1107417_A_T | chr5:1107417 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr5_1106106_C_T | chr5:1106106 | -1.000 | -1.000 | -0.871 | 0.056% |
| chr5_1106102_T_C | chr5:1106102 | -1.000 | -1.000 | -0.706 | 3.82% |
| chr5_1107409_C_T | chr5:1107409 | -1.000 | -1.000 | -0.953 | <0.001% |
| chr5_1107291_C_T | chr5:1107291 | 1.000 | 0.751 | 0.388 | 0.0013% |
| chr5_1119567_G_A | chr5:1119567 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr5_1119545_C_T | chr5:1119545 | 1.000 | 1.000 | 1.000 | <0.001% |
| chr5_1107406_G_A | chr5:1107406 | -1.000 | -1.000 | -1.000 | 0.012% |
| chr5_1119513_T_C | chr5:1119513 | -1.000 | -1.000 | -1.000 | <0.001% |
| chr5_1105594_T_A | chr5:1105594 | 1.000 | 0.695 | 0.694 | <0.001% |
| chr5_1119631_G_C | chr5:1119631 | -1.000 | -1.000 | -1.000 | 0.0059% |
| chr5_1107328_C_G | chr5:1107328 | -1.000 | -1.000 | -0.694 | <0.001% |
| chr5_1105646_C_A | chr5:1105646 | 1.000 | 0.906 | 0.776 | <0.001% |
| chr5_1103796_G_A | chr5:1103796 | -1.000 | -0.480 | -1.000 | <0.001% |
| chr5_1119516_C_A | chr5:1119516 | -0.998 | -1.000 | -1.000 | <0.001% |
| chr5_1119631_G_A | chr5:1119631 | -0.923 | -1.000 | -1.000 | 0.0039% |
| chr5_1103798_C_T | chr5:1103798 | -0.895 | -0.629 | -1.000 | <0.001% |
| chr5_1103851_G_T | chr5:1103851 | -0.885 | -0.528 | -1.000 | <0.001% |
| chr5_1105656_G_T | chr5:1105656 | -0.859 | -0.170 | -0.400 | <0.001% |
| chr5_1106182_G_C | chr5:1106182 | 0.854 | 0.741 | 0.471 | <0.001% |
| chr5_1105625_T_G | chr5:1105625 | -0.852 | 0.284 | -0.741 | <0.001% |
| chr5_1119481_T_C | chr5:1119481 | -0.840 | -0.975 | -1.000 | 4.73% |
| chr5_1118902_A_G | chr5:1118902 | 0.586 | 0.442 | 1.000 | 0.0079% |
| chr5_1118938_G_T | chr5:1118938 | -0.594 | -0.571 | -1.000 | 0.0013% |
| chr5_1107389_G_A | chr5:1107389 | -0.794 | -0.919 | -0.612 | 0.0013% |
| chr5_1105655_G_A | chr5:1105655 | -0.779 | -0.274 | -0.353 | <0.001% |
| chr5_1118892_C_T | chr5:1118892 | -0.587 | -0.541 | -1.000 | 0.0013% |
| chr5_1103796_G_T | chr5:1103796 | -0.739 | -0.495 | -0.635 | <0.001% |
| chr5_1119507_G_A | chr5:1119507 | -0.729 | -1.000 | -0.976 | 0.019% |
| chr5_1105660_T_C | chr5:1105660 | -0.722 | -0.660 | -0.400 | 0.013% |
| chr5_1107901_C_G | chr5:1107901 | 0.712 | 0.505 | 0.529 | <0.001% |
| chr5_1106155_A_G | chr5:1106155 | 0.704 | 0.492 | 0.482 | <0.001% |
| chr5_1119589_T_C | chr5:1119589 | -0.694 | -0.909 | -0.847 | <0.001% |
| chr5_1106083_C_T | chr5:1106083 | -0.679 | -0.624 | -0.271 | 0.0033% |
| chr5_1107328_C_A | chr5:1107328 | -0.662 | -0.756 | -0.400 | <0.001% |
| chr5_1119466_G_C | chr5:1119466 | -0.662 | -0.914 | -0.929 | 0.0013% |
| chr5_1119610_T_C | chr5:1119610 | -0.659 | -0.845 | -1.000 | 0.0013% |
| chr5_1107826_A_G | chr5:1107826 | -0.646 | -0.810 | -0.494 | <0.001% |
| chr5_1106156_G_C | chr5:1106156 | 0.639 | 0.508 | 0.400 | <0.001% |
| chr5_1103824_G_A | chr5:1103824 | -0.636 | -0.353 | -0.753 | <0.001% |
| chr5_1103826_A_T | chr5:1103826 | -0.632 | -0.612 | -0.353 | <0.001% |
| chr5_1106048_G_A | chr5:1106048 | -0.626 | -0.589 | -0.506 | 0.0013% |
| chr5_1119599_G_A | chr5:1119599 | 0.611 | 0.162 | 0.188 | <0.001% |
| chr5_1103795_C_T | chr5:1103795 | -0.602 | -0.312 | -0.624 | 0.0013% |
| chr5_1119460_G_A | chr5:1119460 | 0.602 | 0.698 | 0.576 | 0.0072% |
| chr5_1111382_G_A | chr5:1111382 | 0.597 | 0.472 | 1.000 | 0.332% |
| chr5_1103797_C_T | chr5:1103797 | -0.596 | -0.437 | -0.553 | 0.0013% |
| chr5_1111383_G_T | chr5:1111383 | 0.587 | 0.640 | 1.000 | <0.001% |
| chr5_1105627_T_C | chr5:1105627 | -0.586 | 0.231 | -0.424 | 0.0046% |
| chr5_1111338_C_T | chr5:1111338 | 0.586 | 0.135 | 0.800 | 0.290% |
| chr5_1105644_T_C | chr5:1105644 | 0.576 | 0.102 | 0.671 | <0.001% |
| chr5_1107824_A_T | chr5:1107824 | -0.576 | -0.810 | -0.412 | <0.001% |
| chr5_1105623_T_C | chr5:1105623 | -0.569 | 0.624 | -0.447 | 0.0013% |
| chr5_1119425_C_T | chr5:1119425 | -0.561 | -0.769 | -0.835 | 0.0026% |
| chr5_1106030_C_T | chr5:1106030 | -0.551 | -0.472 | -0.294 | <0.001% |
| chr5_1107484_C_T | chr5:1107484 | 0.546 | 0.569 | 0.341 | <0.001% |
| chr5_1107902_T_A | chr5:1107902 | 0.542 | 0.371 | 0.435 | 0.531% |
| chr5_1107825_A_G | chr5:1107825 | -0.532 | -0.772 | -0.400 | 0.0013% |
| chr5_1111406_G_C | chr5:1111406 | 0.309 | 0.428 | 0.941 | <0.001% |
| chr5_1119514_G_T | chr5:1119514 | -0.531 | -0.695 | -0.624 | <0.001% |
| chr5_1106059_C_T | chr5:1106059 | -0.529 | -0.528 | -0.176 | 0.0020% |
| chr5_1119479_T_G | chr5:1119479 | -0.517 | -0.703 | -0.776 | 0.0026% |
| chr5_1107402_C_T | chr5:1107402 | 0.509 | 0.462 | 0.376 | 0.0059% |
| chr5_1103706_G_A | chr5:1103706 | 0.502 | 0.274 | 0.200 | 0.0013% |
| chr5_1105694_C_G | chr5:1105694 | -0.499 | -0.269 | -0.235 | 0.0092% |
| chr5_1111721_T_G | chr5:1111721 | -0.090 | -0.168 | -0.882 | 0.0013% |
| chr5_1106141_C_T | chr5:1106141 | -0.496 | -0.358 | -0.271 | <0.001% |
| chr5_1107586_C_T | chr5:1107586 | 0.496 | 0.553 | 0.200 | 0.0033% |
| chr5_1107825_A_C | chr5:1107825 | -0.496 | -0.756 | -0.341 | <0.001% |
| chr5_1119696_C_T | chr5:1119696 | -0.494 | -0.675 | -0.682 | 0.0020% |
| chr5_1119673_C_A | chr5:1119673 | 0.489 | 0.645 | 0.718 | <0.001% |
| chr5_1119604_G_A | chr5:1119604 | -0.488 | -0.635 | -0.576 | 0.0033% |
| chr5_1107307_T_C | chr5:1107307 | -0.486 | 0.107 | -0.024 | 0.0013% |
| chr5_1111380_G_C | chr5:1111380 | 0.486 | 0.447 | 0.765 | 0.0020% |
| chr5_1111384_G_T | chr5:1111384 | 0.406 | 0.343 | 0.859 | <0.001% |
| chr5_1119608_G_A | chr5:1119608 | -0.463 | -0.543 | -0.612 | 0.0059% |
| chr5_1111867_C_T | chr5:1111867 | -0.175 | 0.093 | 0.800 | <0.001% |
| chr5_1111339_C_T | chr5:1111339 | 0.443 | 0.096 | 0.706 | <0.001% |
| chr5_1118930_C_T | chr5:1118930 | 0.426 | 0.439 | 0.776 | 0.0013% |
| chr5_1107298_G_A | chr5:1107298 | 0.429 | 0.137 | 0.047 | <0.001% |
| chr5_1119580_G_A | chr5:1119580 | -0.429 | -0.563 | -0.576 | 0.0033% |
| chr5_1106143_A_G | chr5:1106143 | 0.426 | 0.421 | 0.235 | 0.0033% |
| chr5_1111379_G_A | chr5:1111379 | 0.424 | 0.388 | 0.294 | 0.0013% |
| chr5_1105974_A_C | chr5:1105974 | -0.280 | -0.254 | -0.741 | 0.0039% |
| chr5_1107340_C_A | chr5:1107340 | -0.419 | -0.518 | -0.376 | 0.0059% |
| chr5_1107360_G_A | chr5:1107360 | 0.419 | 0.376 | 0.271 | 0.0013% |
| chr5_1119498_G_T | chr5:1119498 | -0.413 | -0.513 | -0.600 | <0.001% |
| chr5_1105993_A_C | chr5:1105993 | -0.409 | -0.193 | -0.471 | 0.0013% |
| chr5_1119545_C_G | chr5:1119545 | 0.408 | 0.437 | 0.459 | 0.0026% |
| chr5_1103813_T_C | chr5:1103813 | -0.406 | -0.373 | -0.294 | <0.001% |
| chr5_1119593_C_T | chr5:1119593 | -0.396 | -0.464 | -0.435 | 0.079% |
| chr5_1103902_C_T | chr5:1103902 | -0.393 | -0.299 | -0.541 | <0.001% |
| chr5_1119445_C_G | chr5:1119445 | 0.391 | 0.541 | 0.447 | <0.001% |
| chr5_1103857_G_C | chr5:1103857 | -0.389 | -0.310 | -0.329 | <0.001% |
| chr5_1112056_A_G | chr5:1112056 | -0.074 | -0.100 | -0.686 | <0.001% |
| chr5_1106138_G_A | chr5:1106138 | -0.388 | -0.368 | -0.176 | 0.177% |
| chr5_1103822_G_A | chr5:1103822 | -0.383 | -0.345 | -0.482 | <0.001% |
| chr5_1107420_G_A | chr5:1107420 | -0.383 | -0.442 | -0.224 | 0.0020% |
| chr5_1111821_C_A | chr5:1111821 | 0.062 | 0.113 | 0.671 | 0.023% |
| chr5_1119657_A_C | chr5:1119657 | 0.376 | 0.594 | 0.388 | 0.0013% |
| chr5_1111386_G_A | chr5:1111386 | 0.225 | 0.246 | 0.659 | 0.0013% |
| chr5_1119679_G_A | chr5:1119679 | -0.364 | -0.388 | -0.635 | 0.0046% |
| chr5_1119572_G_C | chr5:1119572 | 0.363 | 0.368 | 0.341 | 0.0026% |
| chr5_1112112_A_T | chr5:1112112 | -0.049 | -0.029 | -0.634 | 0.0033% |
| chr5_1112020_C_A | chr5:1112020 | 0.133 | 0.109 | 0.632 | <0.001% |
| chr5_1118876_C_T | chr5:1118876 | -0.358 | -0.292 | -0.518 | <0.001% |
| chr5_1103749_G_A | chr5:1103749 | -0.356 | -0.277 | -0.306 | <0.001% |
| chr5_1111346_C_T | chr5:1111346 | 0.354 | 0.228 | 0.459 | <0.001% |
| chr5_1119453_G_A | chr5:1119453 | -0.354 | -0.386 | -0.318 | 0.0053% |
| chr5_1107801_C_A | chr5:1107801 | 0.353 | 0.363 | 0.188 | 0.011% |
| chr5_1111826_G_T | chr5:1111826 | 0.053 | 0.113 | 0.624 | <0.001% |
| chr5_1118914_G_C | chr5:1118914 | -0.145 | -0.234 | -0.612 | <0.001% |
| chr5_1105637_A_C | chr5:1105637 | 0.156 | 1.000 | -0.082 | <0.001% |
| chr5_1107837_T_C | chr5:1107837 | 0.339 | 0.505 | 0.306 | <0.001% |
| chr5_1107898_C_A | chr5:1107898 | -0.339 | -0.355 | -0.318 | <0.001% |
| chr5_1111879_C_T | chr5:1111879 | 0.035 | 0.098 | 0.600 | <0.001% |
| chr5_1103714_C_T | chr5:1103714 | 0.336 | 0.165 | 0.106 | <0.001% |
| chr5_1119429_G_A | chr5:1119429 | -0.331 | -0.419 | -0.435 | 0.0026% |
| chr5_1103837_G_A | chr5:1103837 | -0.326 | -0.386 | -0.259 | 0.0026% |
| chr5_1111996_G_A | chr5:1111996 | 0.147 | 0.231 | 0.571 | <0.001% |
| chr5_1111746_G_A | chr5:1111746 | 0.035 | 0.079 | 0.565 | 0.0085% |
| chr5_1111839_T_G | chr5:1111839 | -0.146 | -0.166 | -0.565 | <0.001% |
| chr5_1105621_T_C | chr5:1105621 | 0.316 | -0.437 | 0.012 | 0.0013% |
| chr5_1106009_T_C | chr5:1106009 | -0.316 | -0.289 | -0.200 | <0.001% |
| chr5_1111412_G_A | chr5:1111412 | 0.053 | 0.070 | 0.553 | 0.0026% |
| chr5_1103738_C_T | chr5:1103738 | -0.306 | -0.188 | -0.247 | 4.81% |
| chr5_1111410_G_C | chr5:1111410 | 0.073 | 0.082 | 0.541 | 0.0013% |
| chr5_1111413_G_A | chr5:1111413 | 0.196 | 0.245 | 0.541 | <0.001% |
| chr5_1111854_G_A | chr5:1111854 | 0.008 | 0.098 | 0.541 | <0.001% |
| chr5_1111872_G_A | chr5:1111872 | 0.040 | 0.121 | 0.541 | <0.001% |
| chr5_1112031_G_A | chr5:1112031 | 0.051 | 0.100 | 0.541 | 0.0013% |
| chr5_1112124_C_G | chr5:1112124 | -0.035 | -0.108 | 0.539 | 0.0026% |
| chr5_1112023_C_A | chr5:1112023 | 0.115 | 0.233 | 0.538 | 0.013% |
| chr5_1105986_C_T | chr5:1105986 | 0.303 | 0.239 | 0.141 | <0.001% |
| chr5_1112030_C_T | chr5:1112030 | 0.090 | 0.110 | 0.532 | <0.001% |
| chr5_1112075_G_C | chr5:1112075 | -0.301 | 0.178 | -0.528 | <0.001% |
| chr5_1112090_G_C | chr5:1112090 | -0.141 | -0.066 | -0.531 | <0.001% |
| chr5_1105693_C_G | chr5:1105693 | -0.300 | 0.094 | -0.059 | 0.051% |
| chr5_1105954_C_T | chr5:1105954 | -0.300 | -0.173 | -0.012 | <0.001% |
| chr5_1111381_G_A | chr5:1111381 | 0.203 | 0.289 | 0.529 | 0.0013% |
| chr5_1111379_G_C | chr5:1111379 | 0.296 | 0.348 | 0.376 | 0.0053% |
| chr5_1119452_C_T | chr5:1119452 | -0.296 | -0.332 | -0.294 | 0.161% |
| chr5_1105569_C_T | chr5:1105569 | -0.295 | 0.236 | -0.235 | <0.001% |
| chr5_1119569_T_C | chr5:1119569 | -0.295 | -0.386 | -0.341 | <0.001% |
| chr5_1106137_C_T | chr5:1106137 | 0.293 | 0.239 | 0.259 | 0.0013% |
| chr5_1111707_G_T | chr5:1111707 | 0.053 | 0.094 | 0.518 | 0.0039% |
| chr5_1111822_G_A | chr5:1111822 | -0.008 | 0.090 | 0.518 | 0.0026% |
| chr5_1119676_C_G | chr5:1119676 | 0.291 | 0.340 | 0.365 | <0.001% |
| chr5_1107346_C_G | chr5:1107346 | 0.290 | 0.492 | 0.294 | <0.001% |
| chr5_1119792_G_C | chr5:1119792 | -0.290 | -0.358 | -0.294 | <0.001% |
| chr5_1112026_G_A | chr5:1112026 | 0.116 | 0.102 | 0.507 | <0.001% |
| chr5_1107819_G_C | chr5:1107819 | -0.286 | -0.431 | -0.318 | 0.0020% |
| chr5_1111860_G_A | chr5:1111860 | 0.013 | 0.090 | 0.506 | 0.0013% |
| chr5_1112025_C_T | chr5:1112025 | 0.155 | 0.133 | 0.506 | 0.0020% |
| chr5_1118873_G_A | chr5:1118873 | -0.256 | -0.256 | -0.506 | <0.001% |
| chr5_1112023_C_T | chr5:1112023 | 0.080 | 0.226 | 0.503 | <0.001% |
| chr5_1103851_G_A | chr5:1103851 | -0.283 | -0.173 | -0.400 | 0.0039% |
| chr5_1111411_G_A | chr5:1111411 | 0.028 | -0.015 | 0.494 | 0.0026% |
| chr5_1118886_G_A | chr5:1118886 | 0.261 | 0.211 | 0.494 | 0.0020% |
| chr5_1119523_C_T | chr5:1119523 | -0.278 | -0.393 | -0.341 | 0.059% |
| chr5_1106008_G_A | chr5:1106008 | -0.273 | -0.305 | -0.071 | 0.0066% |
| chr5_1107402_C_G | chr5:1107402 | 0.273 | 0.112 | 0.306 | <0.001% |
| chr5_1111661_G_A | chr5:1111661 | -0.010 | 0.155 | 0.482 | 0.0072% |
| chr5_1111781_C_T | chr5:1111781 | 0.047 | 0.077 | 0.482 | <0.001% |
| chr5_1111831_G_T | chr5:1111831 | 0.065 | 0.112 | 0.482 | 0.0013% |
| chr5_1119459_C_T | chr5:1119459 | -0.255 | -0.401 | -0.482 | <0.001% |
| chr5_1112101_C_G | chr5:1112101 | -0.272 | 0.002 | -0.402 | <0.001% |
| chr5_1107865_G_C | chr5:1107865 | -0.270 | -0.327 | -0.200 | 0.0013% |
| chr5_1112141_C_A | chr5:1112141 | 0.193 | 0.071 | 0.473 | 0.0013% |
| chr5_1111884_G_A | chr5:1111884 | 0.047 | 0.088 | 0.471 | 0.119% |
| chr5_1118902_A_C | chr5:1118902 | 0.188 | 0.124 | 0.471 | 0.0053% |
| chr5_1118931_G_A | chr5:1118931 | -0.098 | -0.287 | -0.471 | <0.001% |
| chr5_1112037_C_T | chr5:1112037 | 0.073 | 0.188 | 0.469 | <0.001% |
| chr5_1106002_A_G | chr5:1106002 | 0.263 | 0.173 | 0.259 | <0.001% |
| chr5_1111542_G_A | chr5:1111542 | 0.263 | 0.206 | 0.094 | 37.7% |
| chr5_1119538_G_A | chr5:1119538 | 0.261 | 0.353 | 0.365 | 0.0013% |
| chr5_1107756_C_T | chr5:1107756 | -0.260 | -0.228 | -0.247 | <0.001% |
| chr5_1111706_G_C | chr5:1111706 | 0.062 | 0.089 | 0.459 | <0.001% |
| chr5_1119466_G_T | chr5:1119466 | -0.231 | -0.457 | -0.459 | 0.0039% |
| chr5_1119601_A_G | chr5:1119601 | -0.260 | -0.376 | -0.271 | 0.0020% |
| chr5_1119650_T_A | chr5:1119650 | 0.260 | 0.292 | 0.282 | 0.0013% |
| chr5_1107405_C_T | chr5:1107405 | 0.256 | 0.193 | 0.129 | 0.028% |
| chr5_1105546_C_T | chr5:1105546 | -0.253 | -0.094 | -0.247 | 0.0013% |
| chr5_1105822_C_T | chr5:1105822 | 0.073 | 0.137 | 0.447 | 0.0013% |
| chr5_1107651_C_T | chr5:1107651 | 0.253 | 0.259 | 0.188 | <0.001% |
| chr5_1119708_C_G | chr5:1119708 | 0.215 | 0.294 | 0.447 | 0.0052% |
| chr5_1106007_C_T | chr5:1106007 | -0.251 | -0.071 | -0.188 | 0.0033% |
| chr5_1112060_G_C | chr5:1112060 | -0.101 | -0.090 | -0.443 | <0.001% |
| chr5_1103754_C_T | chr5:1103754 | -0.250 | -0.150 | -0.306 | <0.001% |
| chr5_1119717_C_T | chr5:1119717 | 0.250 | 0.358 | 0.318 | 0.0020% |
| chr5_1106140_T_C | chr5:1106140 | 0.246 | 0.135 | 0.141 | <0.001% |
| chr5_1111825_C_T | chr5:1111825 | 0.022 | 0.072 | 0.435 | 0.0013% |
| chr5_1111908_C_A | chr5:1111908 | 0.067 | 0.084 | 0.435 | <0.001% |
| chr5_1111941_G_A | chr5:1111941 | 0.021 | 0.065 | 0.435 | 0.0013% |
| chr5_1118910_C_T | chr5:1118910 | -0.111 | -0.124 | -0.435 | 0.0013% |
| chr5_1119553_G_A | chr5:1119553 | -0.208 | -0.312 | -0.435 | <0.001% |
| chr5_1105649_C_T | chr5:1105649 | 0.243 | -0.135 | 0.271 | <0.001% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.