Home / Gene
SLC9A3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SLC9A3
chr5:370,455..624,449, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_373897_G_A | chr5:373897 | 14,560 | 1,424 | 26,432 | 6.6e-6 |
| chr5_373841_C_G | chr5:373841 | -10,048 | -520 | -31,104 | 6.6e-6 |
| chr5_373896_C_A | chr5:373896 | -7,936 | -638 | -14,272 | 4.0e-5 |
| chr5_373817_G_C | chr5:373817 | 7,872 | 620 | 16,960 | 1.3e-5 |
| chr5_373905_G_T | chr5:373905 | 7,744 | 606 | 16,416 | 1.3e-5 |
| chr5_373847_C_T | chr5:373847 | -7,424 | -380 | -7,616 | 6.6e-6 |
| chr5_373832_G_A | chr5:373832 | -7,296 | 42 | -26,304 | 6.6e-6 |
| chr5_373899_G_C | chr5:373899 | -7,008 | -716 | -18,784 | 5.3e-5 |
| chr5_373835_G_C | chr5:373835 | -6,688 | -350 | -15,200 | 4.0e-5 |
| chr5_373877_G_C | chr5:373877 | 5,600 | 420 | 11,136 | 4.0e-5 |
| chr5_373895_T_C | chr5:373895 | -5,248 | -778 | -20,064 | 1.3e-5 |
| chr5_373885_G_C | chr5:373885 | -5,120 | -222 | -11,008 | 6.6e-6 |
| chr5_373870_C_G | chr5:373870 | -4,960 | -72 | -13,376 | 1.3e-5 |
| chr5_373892_C_T | chr5:373892 | 4,800 | 180 | 10,112 | 1.3e-5 |
| chr5_373647_T_G | chr5:373647 | -4,736 | -558 | -14,464 | — |
| chr5_373860_G_A | chr5:373860 | 4,448 | 624 | 16,000 | 6.6e-6 |
| chr5_373852_G_A | chr5:373852 | -4,416 | -84 | -5,184 | 2.0e-5 |
| chr5_373778_C_G | chr5:373778 | 4,224 | 208 | 4,288 | 6.6e-5 |
| chr5_373642_A_G | chr5:373642 | -3,584 | -1,250 | -21,312 | — |
| chr5_373644_A_G | chr5:373644 | -3,552 | -1,272 | -21,504 | — |
| chr5_373866_T_G | chr5:373866 | -3,328 | -278 | -9,280 | 2.7e-5 |
| chr5_373807_C_T | chr5:373807 | -3,328 | -72 | -2,560 | 1.3e-5 |
| chr5_373884_G_T | chr5:373884 | -3,232 | 28 | -8,384 | 6.6e-6 |
| chr5_373589_C_G | chr5:373589 | -3,200 | -758 | -10,944 | — |
| chr5_373656_G_T | chr5:373656 | -3,168 | 42 | -1,408 | 6.6e-6 |
| chr5_373600_G_C | chr5:373600 | 3,136 | 260 | 5,440 | — |
| chr5_373727_C_G | chr5:373727 | -3,008 | -366 | -7,936 | 1.3e-5 |
| chr5_373779_C_T | chr5:373779 | 2,912 | 408 | 8,960 | 6.6e-6 |
| chr5_373458_C_G | chr5:373458 | 2,880 | 564 | 2,432 | — |
| chr5_373872_C_T | chr5:373872 | 2,848 | 548 | 9,536 | 6.6e-6 |
| chr5_373602_G_C | chr5:373602 | 2,816 | 374 | 6,464 | 3.3e-5 |
| chr5_373457_C_G | chr5:373457 | 2,784 | 940 | 3,904 | — |
| chr5_373597_A_G | chr5:373597 | -2,656 | -734 | -14,592 | — |
| chr5_373828_T_G | chr5:373828 | -2,464 | -106 | -8,064 | 6.6e-6 |
| chr5_373602_G_A | chr5:373602 | 2,336 | 152 | 5,504 | — |
| chr5_373647_T_C | chr5:373647 | -2,336 | -46 | -2,112 | — |
| chr5_373895_T_A | chr5:373895 | -2,240 | -274 | -6,848 | 1.3e-5 |
| chr5_373647_T_A | chr5:373647 | -2,240 | -32 | -2,176 | — |
| chr5_373601_G_C | chr5:373601 | 2,208 | 198 | 3,712 | — |
| chr5_373638_C_G | chr5:373638 | -2,048 | -470 | -11,072 | — |
| chr5_373639_T_G | chr5:373639 | -1,984 | -660 | -10,688 | — |
| chr5_373783_C_T | chr5:373783 | 1,824 | 192 | 8,576 | 6.6e-6 |
| chr5_373568_C_G | chr5:373568 | -1,824 | -18 | -3,584 | — |
| chr5_373567_T_C | chr5:373567 | -1,824 | -106 | -3,328 | — |
| chr5_373856_G_T | chr5:373856 | -1,792 | -208 | 4,800 | 4.0e-5 |
| chr5_373459_C_G | chr5:373459 | 1,760 | -4 | 3,648 | — |
| chr5_373629_A_G | chr5:373629 | -1,664 | -494 | -9,216 | — |
| chr5_373638_C_A | chr5:373638 | -1,664 | -160 | -3,776 | — |
| chr5_373603_G_A | chr5:373603 | 1,664 | 108 | 2,688 | — |
| chr5_373772_C_A | chr5:373772 | -1,664 | -6 | 2,496 | 6.6e-6 |
| chr5_373566_C_T | chr5:373566 | -1,632 | -98 | -4,544 | — |
| chr5_373556_T_C | chr5:373556 | 1,600 | 260 | 2,944 | — |
| chr5_373565_A_T | chr5:373565 | -1,536 | -110 | -3,776 | — |
| chr5_373604_G_A | chr5:373604 | 1,504 | 124 | 4,032 | — |
| chr5_373460_C_G | chr5:373460 | 1,504 | -76 | 2,304 | — |
| chr5_373533_C_A | chr5:373533 | -1,440 | -84 | -5,952 | — |
| chr5_373816_C_T | chr5:373816 | -1,440 | 56 | 3,584 | 6.6e-5 |
| chr5_373600_G_A | chr5:373600 | 1,440 | -60 | 2,944 | — |
| chr5_373568_C_A | chr5:373568 | -1,408 | -84 | -2,688 | — |
| chr5_373626_A_G | chr5:373626 | -1,376 | -404 | -8,448 | — |
| chr5_373634_G_C | chr5:373634 | 1,376 | 332 | 4,480 | — |
| chr5_373518_A_T | chr5:373518 | 1,376 | 40 | 3,456 | — |
| chr5_373560_C_G | chr5:373560 | 1,376 | 188 | 3,392 | — |
| chr5_373882_C_T | chr5:373882 | 1,376 | 528 | 2,496 | 2.7e-5 |
| chr5_373552_T_C | chr5:373552 | 1,376 | 194 | 2,240 | — |
| chr5_373549_C_T | chr5:373549 | -1,344 | -66 | -5,056 | — |
| chr5_373632_C_G | chr5:373632 | -1,344 | -192 | -3,584 | — |
| chr5_373461_T_G | chr5:373461 | 1,344 | 32 | 2,240 | — |
| chr5_373881_C_T | chr5:373881 | 1,312 | 398 | 7,872 | 1.3e-5 |
| chr5_373636_G_C | chr5:373636 | 1,312 | 430 | 5,696 | — |
| chr5_373740_C_A | chr5:373740 | 1,312 | 240 | 5,504 | 1.7e-4 |
| chr5_373809_C_T | chr5:373809 | 1,280 | 164 | 7,040 | 2.7e-3 |
| chr5_373791_C_T | chr5:373791 | 1,248 | 122 | 3,136 | 1.6e-4 |
| chr5_373570_C_T | chr5:373570 | -1,248 | -154 | -2,944 | — |
| chr5_373711_G_T | chr5:373711 | 1,216 | 272 | 8,704 | 6.6e-6 |
| chr5_373767_C_T | chr5:373767 | 1,216 | 140 | 4,160 | 2.0e-5 |
| chr5_373569_A_T | chr5:373569 | -1,216 | -214 | -2,688 | — |
| chr5_373615_C_A | chr5:373615 | 1,184 | 220 | 2,496 | — |
| chr5_373616_A_T | chr5:373616 | 1,184 | 194 | 2,432 | — |
| chr5_373660_C_T | chr5:373660 | -1,152 | -126 | -4,032 | 4.6e-5 |
| chr5_373635_G_C | chr5:373635 | 1,120 | 336 | 4,032 | — |
| chr5_373570_C_A | chr5:373570 | -1,120 | -142 | -3,840 | — |
| chr5_373550_C_A | chr5:373550 | -1,120 | -132 | -2,496 | — |
| chr5_373579_A_T | chr5:373579 | -1,120 | 10 | -2,240 | — |
| chr5_373636_G_A | chr5:373636 | 1,088 | 344 | 5,312 | — |
| chr5_373533_C_T | chr5:373533 | -1,088 | -142 | -3,840 | — |
| chr5_373616_A_G | chr5:373616 | 1,088 | 90 | 3,264 | — |
| chr5_373458_C_A | chr5:373458 | 1,088 | 242 | 3,072 | 6.6e-6 |
| chr5_373795_C_T | chr5:373795 | 1,056 | 454 | 9,728 | 6.6e-6 |
| chr5_373837_C_T | chr5:373837 | 1,056 | 288 | 5,568 | 6.6e-6 |
| chr5_373600_G_T | chr5:373600 | 1,056 | -44 | 3,328 | — |
| chr5_373505_C_G | chr5:373505 | 1,056 | 374 | 2,880 | — |
| chr5_373393_C_G | chr5:373393 | -1,056 | -256 | -2,304 | — |
| chr5_373566_C_A | chr5:373566 | -1,024 | -38 | -4,800 | — |
| chr5_373808_G_A | chr5:373808 | 1,024 | 292 | 4,224 | 3.3e-5 |
| chr5_373800_C_T | chr5:373800 | 992 | -184 | 5,440 | 6.6e-6 |
| chr5_373759_C_T | chr5:373759 | 992 | 72 | 3,392 | 6.6e-6 |
| chr5_373506_A_C | chr5:373506 | -992 | 112 | -3,200 | — |
| chr5_373546_G_T | chr5:373546 | -992 | -86 | -2,304 | — |
| chr5_373636_G_T | chr5:373636 | 960 | 362 | 5,120 | — |
| chr5_373615_C_G | chr5:373615 | 960 | 248 | 2,880 | — |
| chr5_373764_C_G | chr5:373764 | 928 | 174 | 5,184 | 6.6e-6 |
| chr5_373753_T_G | chr5:373753 | -928 | -30 | -3,712 | 6.6e-6 |
| chr5_373659_G_A | chr5:373659 | 928 | 190 | 3,648 | 6.6e-6 |
| chr5_373392_G_C | chr5:373392 | 928 | 360 | 3,584 | — |
| chr5_373555_C_A | chr5:373555 | -928 | -168 | -3,264 | — |
| chr5_373561_A_T | chr5:373561 | 928 | 68 | 3,072 | — |
| chr5_373637_G_A | chr5:373637 | 928 | 198 | 3,008 | 6.6e-6 |
| chr5_373459_C_A | chr5:373459 | 928 | -60 | 2,240 | — |
| chr5_373562_T_G | chr5:373562 | 896 | 90 | 3,520 | — |
| chr5_373749_C_T | chr5:373749 | 864 | 186 | 5,632 | 8.6e-5 |
| chr5_373617_T_A | chr5:373617 | 864 | 126 | 2,880 | — |
| chr5_373567_T_A | chr5:373567 | -864 | -98 | -2,816 | — |
| chr5_373592_G_A | chr5:373592 | 864 | 288 | 2,496 | — |
| chr5_373622_G_A | chr5:373622 | -864 | -174 | -2,496 | — |
| chr5_373713_G_A | chr5:373713 | 832 | 188 | 7,104 | 6.6e-6 |
| chr5_373617_T_G | chr5:373617 | 832 | 170 | 4,416 | — |
| chr5_373566_C_G | chr5:373566 | -832 | 14 | -3,328 | — |
| chr5_373513_T_C | chr5:373513 | -832 | -132 | -2,496 | — |
| chr5_373721_G_T | chr5:373721 | 800 | 156 | 5,312 | 6.6e-6 |
| chr5_373590_T_G | chr5:373590 | -800 | -208 | -3,072 | 6.7e-6 |
| chr5_373707_G_A | chr5:373707 | 768 | 256 | 6,080 | 1.3e-5 |
| chr5_373602_G_T | chr5:373602 | 768 | -46 | 2,880 | — |
| chr5_373504_C_G | chr5:373504 | 768 | 76 | 2,240 | — |
| chr5_373633_T_G | chr5:373633 | -736 | -256 | -5,568 | 7.0e-6 |
| chr5_373897_G_T | chr5:373897 | 736 | 216 | 2,688 | 6.6e-6 |
| chr5_373601_G_A | chr5:373601 | 704 | -60 | 2,880 | — |
| chr5_373550_C_T | chr5:373550 | -704 | -92 | -2,752 | 3.3e-3 |
| chr5_373631_A_G | chr5:373631 | -672 | -230 | -4,224 | — |
| chr5_373788_T_G | chr5:373788 | 672 | 30 | -2,560 | 6.7e-6 |
| chr5_373850_G_A | chr5:373850 | 672 | 232 | 2,368 | 2.1e-4 |
| chr5_373626_A_C | chr5:373626 | 672 | 144 | 2,240 | — |
| chr5_373766_C_T | chr5:373766 | 640 | 196 | 5,696 | 3.3e-5 |
| chr5_373609_T_A | chr5:373609 | 640 | 74 | 2,496 | — |
| chr5_373606_C_G | chr5:373606 | 640 | 144 | 2,368 | 6.6e-6 |
| chr5_373618_C_G | chr5:373618 | 640 | 18 | 2,368 | — |
| chr5_373588_G_A | chr5:373588 | 640 | 172 | 2,240 | — |
| chr5_373594_C_G | chr5:373594 | -608 | -296 | -6,848 | — |
| chr5_373757_C_T | chr5:373757 | -608 | 174 | 5,760 | 6.6e-6 |
| chr5_373562_T_C | chr5:373562 | -608 | -70 | 2,560 | — |
| chr5_373607_T_G | chr5:373607 | 576 | 248 | 3,584 | — |
| chr5_373564_C_T | chr5:373564 | 576 | 300 | -3,136 | 6.6e-6 |
| chr5_373623_A_G | chr5:373623 | -576 | -144 | -2,624 | — |
| chr5_373561_A_C | chr5:373561 | 576 | 84 | 2,240 | — |
| chr5_373764_C_T | chr5:373764 | 544 | 214 | 7,168 | 1.3e-5 |
| chr5_373801_G_T | chr5:373801 | 544 | 144 | 6,080 | 6.6e-6 |
| chr5_373635_G_T | chr5:373635 | 544 | 210 | 3,968 | — |
| chr5_373561_A_G | chr5:373561 | 544 | 138 | 3,008 | — |
| chr5_373385_C_G | chr5:373385 | -544 | -328 | -2,944 | — |
| chr5_373516_C_A | chr5:373516 | -544 | -114 | -2,368 | — |
| chr5_373745_G_A | chr5:373745 | -512 | 146 | 3,456 | 5.3e-5 |
| chr5_373772_C_T | chr5:373772 | 480 | 208 | 6,016 | 1.8e-4 |
| chr5_373835_G_A | chr5:373835 | 480 | 190 | 5,376 | 2.0e-5 |
| chr5_373500_T_C | chr5:373500 | 480 | 132 | 2,304 | 6.6e-6 |
| chr5_373611_T_C | chr5:373611 | -480 | 76 | 2,240 | — |
| chr5_373765_G_T | chr5:373765 | 448 | 218 | 6,848 | 6.6e-6 |
| chr5_373617_T_C | chr5:373617 | 448 | 100 | 4,288 | — |
| chr5_373760_G_A | chr5:373760 | 384 | 158 | 4,544 | 3.7e-2 |
| chr5_373741_G_A | chr5:373741 | 384 | 148 | 4,160 | 3.3e-5 |
| chr5_373424_G_T | chr5:373424 | -384 | -52 | -3,456 | — |
| chr5_373499_A_T | chr5:373499 | 384 | 118 | 2,688 | — |
| chr5_373493_A_C | chr5:373493 | 384 | 2 | -2,560 | — |
| chr5_373609_T_G | chr5:373609 | 384 | 146 | 2,304 | — |
| chr5_373526_G_T | chr5:373526 | -352 | -122 | -2,752 | — |
| chr5_373499_A_C | chr5:373499 | 352 | 136 | 2,560 | — |
| chr5_373607_T_A | chr5:373607 | 352 | 192 | 2,496 | — |
| chr5_373611_T_G | chr5:373611 | 352 | 52 | 2,304 | — |
| chr5_373773_G_A | chr5:373773 | 320 | 254 | 5,440 | 6.6e-6 |
| chr5_373749_C_A | chr5:373749 | 320 | 138 | 3,776 | 4.0e-5 |
| chr5_373577_C_G | chr5:373577 | -320 | -94 | -2,944 | — |
| chr5_373643_G_A | chr5:373643 | 320 | 116 | 2,688 | — |
| chr5_373768_C_A | chr5:373768 | -288 | 138 | 4,480 | 6.6e-6 |
| chr5_373564_C_A | chr5:373564 | -288 | -6 | -3,968 | — |
| chr5_373616_A_C | chr5:373616 | 288 | 174 | 3,456 | — |
| chr5_373609_T_C | chr5:373609 | 288 | 120 | 3,136 | — |
| chr5_373634_G_A | chr5:373634 | 288 | 88 | 2,880 | — |
| chr5_373635_G_A | chr5:373635 | -288 | 192 | 2,880 | — |
| chr5_373526_G_A | chr5:373526 | -288 | -58 | -2,816 | 1.3e-5 |
| chr5_373599_G_C | chr5:373599 | 288 | -40 | 2,752 | 8.1e-4 |
| chr5_373586_T_G | chr5:373586 | 288 | -168 | -2,432 | — |
| chr5_373353_A_T | chr5:373353 | -224 | 328 | 3,840 | — |
| chr5_373646_G_T | chr5:373646 | 224 | 166 | 3,328 | — |
| chr5_373576_G_T | chr5:373576 | -224 | 170 | -2,688 | — |
| chr5_373480_C_T | chr5:373480 | 224 | -16 | -2,432 | — |
| chr5_373627_G_C | chr5:373627 | 224 | 94 | 2,240 | — |
| chr5_373353_A_C | chr5:373353 | -192 | -16 | 2,176 | — |
| chr5_373643_G_C | chr5:373643 | -160 | 70 | 2,752 | — |
| chr5_373555_C_T | chr5:373555 | -160 | -60 | -2,240 | — |
| chr5_373645_G_C | chr5:373645 | -128 | 128 | 2,816 | — |
| chr5_373571_C_A | chr5:373571 | 128 | -34 | -2,496 | — |
| chr5_373581_T_G | chr5:373581 | 128 | 40 | -2,240 | — |
| chr5_373715_G_A | chr5:373715 | 64 | 168 | 4,416 | 6.6e-6 |
| chr5_373760_G_T | chr5:373760 | 64 | 128 | 3,968 | 2.6e-5 |
| chr5_373377_G_C | chr5:373377 | -64 | -56 | 3,200 | — |
| chr5_373637_G_C | chr5:373637 | -64 | 72 | 2,560 | — |
| chr5_373640_G_C | chr5:373640 | 32 | 130 | 2,560 | — |
| chr5_373646_G_A | chr5:373646 | -32 | 134 | 2,560 | — |
| chr5_373507_C_T | chr5:373507 | -32 | 56 | -2,368 | — |
| chr5_373348_T_A | chr5:373348 | 32 | 24 | 2,304 | — |
| chr5_373391_G_T | chr5:373391 | 0 | -40 | -2,816 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.