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SNAR-A3
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SNAR-A3
chr19:47,823,778..50,228,522, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr19_47886396_G_T | chr19:47886396 | 1.000 | 1.000 | 1.000 | — |
| chr19_47886435_C_T | chr19:47886435 | 1.000 | 0.802 | 0.644 | — |
| chr19_47886400_A_T | chr19:47886400 | 1.000 | 1.000 | 1.000 | — |
| chr19_47886396_G_C | chr19:47886396 | 1.000 | 1.000 | 0.941 | — |
| chr19_47886443_A_C | chr19:47886443 | 1.000 | 1.000 | 0.779 | — |
| chr19_47886463_C_G | chr19:47886463 | -1.000 | -1.000 | -0.759 | — |
| chr19_47886427_A_C | chr19:47886427 | 1.000 | 0.891 | 0.571 | — |
| chr19_47886458_T_C | chr19:47886458 | -0.978 | -1.000 | -0.862 | — |
| chr19_47886425_A_G | chr19:47886425 | 0.952 | 0.924 | 0.474 | — |
| chr19_47886459_T_A | chr19:47886459 | -0.933 | -1.000 | -0.799 | — |
| chr19_47886459_T_C | chr19:47886459 | -0.928 | -1.000 | -0.799 | — |
| chr19_47886465_A_T | chr19:47886465 | -0.902 | -1.000 | -0.701 | — |
| chr19_47886465_A_C | chr19:47886465 | -0.895 | -1.000 | -0.691 | — |
| chr19_47886458_T_A | chr19:47886458 | -0.889 | -1.000 | -0.806 | — |
| chr19_47886458_T_G | chr19:47886458 | -0.886 | -1.000 | -0.774 | — |
| chr19_47886403_T_A | chr19:47886403 | -0.868 | -0.992 | -0.726 | — |
| chr19_47886465_A_G | chr19:47886465 | -0.864 | -1.000 | -0.690 | — |
| chr19_47886452_A_C | chr19:47886452 | 0.839 | 0.848 | 0.594 | — |
| chr19_47886470_G_T | chr19:47886470 | 0.837 | 0.949 | 0.718 | — |
| chr19_47886401_G_T | chr19:47886401 | -0.814 | -0.987 | -0.788 | — |
| chr19_47886409_G_A | chr19:47886409 | 0.799 | 0.970 | 0.432 | — |
| chr19_47886462_G_A | chr19:47886462 | -0.792 | -0.990 | -0.671 | — |
| chr19_47886405_A_T | chr19:47886405 | -0.780 | -0.926 | -0.832 | — |
| chr19_47886405_A_C | chr19:47886405 | -0.778 | -0.921 | -0.790 | — |
| chr19_47886415_A_G | chr19:47886415 | -0.770 | -0.739 | -0.421 | — |
| chr19_47886453_A_C | chr19:47886453 | 0.749 | 0.723 | 0.509 | — |
| chr19_47886431_T_A | chr19:47886431 | -0.740 | -0.853 | -0.534 | — |
| chr19_47886409_G_T | chr19:47886409 | 0.739 | 0.883 | 0.429 | — |
| chr19_47886425_A_C | chr19:47886425 | 0.737 | 0.886 | 0.332 | — |
| chr19_47886462_G_C | chr19:47886462 | -0.732 | -0.891 | -0.574 | — |
| chr19_47886462_G_T | chr19:47886462 | -0.716 | -0.914 | -0.568 | — |
| chr19_47886453_A_T | chr19:47886453 | 0.715 | 0.680 | 0.485 | — |
| chr19_47886412_G_T | chr19:47886412 | -0.703 | -0.739 | -0.594 | — |
| chr19_47886382_G_C | chr19:47886382 | -0.702 | -0.850 | -0.665 | — |
| chr19_47886426_T_C | chr19:47886426 | 0.697 | 0.825 | 0.356 | — |
| chr19_47886389_G_C | chr19:47886389 | -0.696 | -0.843 | -0.647 | — |
| chr19_47886431_T_G | chr19:47886431 | -0.689 | -0.749 | -0.472 | — |
| chr19_47886411_T_G | chr19:47886411 | -0.681 | -0.731 | -0.474 | — |
| chr19_47886464_A_G | chr19:47886464 | -0.672 | -0.855 | -0.591 | — |
| chr19_47886403_T_C | chr19:47886403 | -0.671 | -0.772 | -0.576 | — |
| chr19_47886426_T_G | chr19:47886426 | 0.671 | 0.774 | 0.415 | — |
| chr19_47886415_A_C | chr19:47886415 | -0.666 | -0.655 | -0.315 | — |
| chr19_47886412_G_C | chr19:47886412 | -0.664 | -0.688 | -0.562 | — |
| chr19_47886449_T_A | chr19:47886449 | 0.661 | 0.662 | 0.197 | — |
| chr19_47886412_G_A | chr19:47886412 | -0.659 | -0.690 | -0.562 | — |
| chr19_47886391_T_A | chr19:47886391 | -0.652 | -0.792 | -0.424 | — |
| chr19_47886499_A_T | chr19:47886499 | -0.649 | -0.744 | -0.449 | — |
| chr19_47886403_T_G | chr19:47886403 | -0.642 | -0.843 | -0.559 | — |
| chr19_47886431_T_C | chr19:47886431 | -0.641 | -0.749 | -0.471 | — |
| chr19_47886401_G_A | chr19:47886401 | -0.638 | -0.744 | -0.579 | — |
| chr19_47886402_T_A | chr19:47886402 | -0.637 | -0.777 | -0.659 | — |
| chr19_47886464_A_T | chr19:47886464 | -0.637 | -0.817 | -0.535 | — |
| chr19_47886464_A_C | chr19:47886464 | -0.623 | -0.772 | -0.524 | — |
| chr19_47886563_T_G | chr19:47886563 | 0.621 | 0.627 | 0.350 | — |
| chr19_47886506_C_G | chr19:47886506 | 0.611 | 0.698 | 0.297 | — |
| chr19_47886399_A_T | chr19:47886399 | -0.603 | -0.635 | -0.376 | — |
| chr19_47886406_C_A | chr19:47886406 | -0.602 | -0.586 | -0.468 | — |
| chr19_47886414_T_A | chr19:47886414 | -0.601 | -0.487 | -0.424 | — |
| chr19_47886402_T_C | chr19:47886402 | -0.600 | -0.617 | -0.488 | — |
| chr19_47886478_C_A | chr19:47886478 | -0.596 | -0.624 | -0.456 | — |
| chr19_47886407_T_G | chr19:47886407 | -0.594 | -0.744 | -0.512 | — |
| chr19_47886457_G_T | chr19:47886457 | -0.594 | -0.843 | -0.400 | — |
| chr19_47886426_T_A | chr19:47886426 | 0.592 | 0.678 | 0.429 | — |
| chr19_47886439_A_G | chr19:47886439 | 0.592 | 0.652 | 0.394 | — |
| chr19_47886435_C_G | chr19:47886435 | 0.591 | 0.348 | 0.285 | — |
| chr19_47886446_A_C | chr19:47886446 | 0.591 | 0.553 | 0.447 | — |
| chr19_47886437_A_C | chr19:47886437 | -0.583 | -0.602 | -0.446 | — |
| chr19_47886459_T_G | chr19:47886459 | -0.572 | -0.713 | -0.435 | — |
| chr19_47886460_G_C | chr19:47886460 | -0.567 | -0.716 | -0.541 | — |
| chr19_47886416_A_T | chr19:47886416 | -0.556 | -0.574 | -0.382 | — |
| chr19_47886413_A_C | chr19:47886413 | -0.550 | -0.561 | -0.297 | — |
| chr19_47886413_A_G | chr19:47886413 | -0.534 | -0.530 | -0.247 | — |
| chr19_47886394_T_A | chr19:47886394 | -0.523 | -0.581 | -0.494 | — |
| chr19_47886389_G_T | chr19:47886389 | -0.512 | -0.627 | -0.488 | — |
| chr19_47886413_A_T | chr19:47886413 | -0.512 | -0.510 | -0.285 | — |
| chr19_47886397_T_G | chr19:47886397 | 0.511 | 0.794 | 0.303 | — |
| chr19_47886511_G_A | chr19:47886511 | 0.511 | 0.551 | 0.041 | — |
| chr19_47886414_T_G | chr19:47886414 | -0.507 | -0.396 | -0.276 | — |
| chr19_47886434_C_T | chr19:47886434 | -0.507 | -0.566 | -0.379 | — |
| chr19_47886499_A_C | chr19:47886499 | -0.503 | -0.612 | -0.312 | — |
| chr19_47886466_T_G | chr19:47886466 | -0.495 | -0.594 | -0.444 | — |
| chr19_47886397_T_C | chr19:47886397 | 0.491 | 0.754 | 0.324 | — |
| chr19_47886453_A_G | chr19:47886453 | 0.491 | 0.607 | 0.418 | — |
| chr19_47886407_T_A | chr19:47886407 | -0.485 | -0.563 | -0.374 | — |
| chr19_47886395_T_C | chr19:47886395 | -0.478 | -0.718 | -0.476 | — |
| chr19_47886406_C_G | chr19:47886406 | -0.476 | -0.485 | -0.424 | — |
| chr19_47886452_A_T | chr19:47886452 | 0.472 | 0.452 | 0.329 | — |
| chr19_47886443_A_T | chr19:47886443 | 0.471 | 0.596 | 0.332 | — |
| chr19_47886450_T_G | chr19:47886450 | -0.469 | -0.523 | -0.356 | — |
| chr19_47886445_A_G | chr19:47886445 | -0.468 | -0.586 | -0.371 | — |
| chr19_47886484_A_T | chr19:47886484 | 0.467 | 0.566 | 0.426 | — |
| chr19_47886497_T_G | chr19:47886497 | -0.463 | -0.614 | -0.279 | — |
| chr19_47886402_T_G | chr19:47886402 | -0.458 | -0.393 | -0.306 | — |
| chr19_47886488_T_G | chr19:47886488 | 0.452 | 0.543 | 0.374 | — |
| chr19_47886493_G_T | chr19:47886493 | -0.451 | -0.525 | -0.397 | — |
| chr19_47886455_A_C | chr19:47886455 | 0.449 | 0.431 | 0.285 | — |
| chr19_47886439_A_C | chr19:47886439 | -0.447 | -0.447 | -0.378 | — |
| chr19_47886499_A_G | chr19:47886499 | -0.437 | -0.602 | -0.315 | — |
| chr19_47886456_T_G | chr19:47886456 | 0.436 | 0.543 | 0.344 | — |
| chr19_47886393_G_C | chr19:47886393 | -0.433 | -0.523 | -0.406 | — |
| chr19_47886394_T_G | chr19:47886394 | 0.429 | 0.530 | 0.353 | — |
| chr19_47886390_T_A | chr19:47886390 | -0.426 | -0.411 | -0.318 | — |
| chr19_47886482_A_T | chr19:47886482 | 0.426 | 0.548 | 0.368 | — |
| chr19_47886538_A_T | chr19:47886538 | 0.423 | 0.515 | 0.409 | — |
| chr19_47886440_C_T | chr19:47886440 | 0.423 | 0.444 | 0.335 | — |
| chr19_47886399_A_G | chr19:47886399 | 0.419 | 0.655 | 0.244 | — |
| chr19_47886440_C_G | chr19:47886440 | 0.418 | 0.477 | 0.388 | — |
| chr19_47886474_T_A | chr19:47886474 | -0.417 | -0.452 | -0.259 | — |
| chr19_47886451_G_C | chr19:47886451 | -0.411 | -0.525 | -0.379 | — |
| chr19_47886454_G_C | chr19:47886454 | 0.408 | 0.383 | 0.394 | — |
| chr19_47886410_C_T | chr19:47886410 | -0.400 | -0.404 | -0.244 | — |
| chr19_47886467_C_T | chr19:47886467 | -0.400 | -0.472 | -0.303 | — |
| chr19_47886391_T_G | chr19:47886391 | -0.386 | -0.487 | -0.194 | — |
| chr19_47886463_C_A | chr19:47886463 | -0.383 | -0.464 | -0.206 | — |
| chr19_47886401_G_C | chr19:47886401 | -0.381 | -0.485 | -0.303 | — |
| chr19_47886384_C_T | chr19:47886384 | -0.378 | -0.497 | -0.276 | — |
| chr19_47886384_C_A | chr19:47886384 | -0.376 | -0.485 | -0.291 | — |
| chr19_47886422_G_T | chr19:47886422 | -0.374 | -0.426 | -0.412 | — |
| chr19_47886411_T_C | chr19:47886411 | -0.371 | -0.393 | -0.194 | — |
| chr19_47886563_T_A | chr19:47886563 | 0.369 | 0.388 | 0.191 | — |
| chr19_47886436_C_T | chr19:47886436 | 0.367 | 0.424 | 0.341 | — |
| chr19_47886416_A_C | chr19:47886416 | -0.359 | -0.340 | -0.156 | — |
| chr19_47886489_T_G | chr19:47886489 | 0.354 | 0.553 | 0.262 | — |
| chr19_47886442_C_T | chr19:47886442 | -0.351 | -0.393 | -0.335 | — |
| chr19_47886460_G_T | chr19:47886460 | -0.350 | -0.467 | -0.316 | — |
| chr19_47886410_C_A | chr19:47886410 | -0.349 | -0.340 | -0.309 | — |
| chr19_47886409_G_C | chr19:47886409 | -0.347 | -0.284 | -0.103 | — |
| chr19_47886478_C_G | chr19:47886478 | -0.347 | -0.332 | -0.200 | — |
| chr19_47886425_A_T | chr19:47886425 | 0.344 | 0.218 | 0.103 | — |
| chr19_47886387_A_C | chr19:47886387 | -0.341 | -0.358 | -0.147 | — |
| chr19_47886481_G_C | chr19:47886481 | 0.336 | 0.353 | 0.200 | — |
| chr19_47886435_C_A | chr19:47886435 | 0.333 | 0.178 | 0.141 | — |
| chr19_47886390_T_C | chr19:47886390 | -0.331 | -0.338 | -0.250 | — |
| chr19_47886424_T_C | chr19:47886424 | 0.331 | 0.371 | 0.209 | — |
| chr19_47886481_G_T | chr19:47886481 | -0.331 | -0.411 | -0.256 | — |
| chr19_47886530_A_C | chr19:47886530 | 0.331 | 0.391 | 0.262 | — |
| chr19_47886408_T_A | chr19:47886408 | -0.330 | -0.383 | -0.303 | — |
| chr19_47886480_A_T | chr19:47886480 | -0.329 | -0.381 | -0.309 | — |
| chr19_47886408_T_G | chr19:47886408 | -0.325 | -0.350 | -0.297 | — |
| chr19_47886515_C_T | chr19:47886515 | -0.325 | -0.393 | -0.215 | — |
| chr19_47886417_A_T | chr19:47886417 | -0.324 | -0.353 | -0.179 | — |
| chr19_47886447_G_C | chr19:47886447 | 0.324 | 0.368 | 0.165 | — |
| chr19_47886478_C_T | chr19:47886478 | -0.324 | -0.338 | -0.191 | — |
| chr19_47886487_A_C | chr19:47886487 | -0.324 | -0.246 | -0.197 | — |
| chr19_47886386_C_G | chr19:47886386 | -0.321 | -0.482 | -0.344 | — |
| chr19_47886489_T_A | chr19:47886489 | 0.319 | 0.269 | 0.168 | — |
| chr19_47886451_G_A | chr19:47886451 | 0.316 | 0.310 | 0.165 | — |
| chr19_47886497_T_C | chr19:47886497 | -0.316 | -0.515 | -0.182 | — |
| chr19_47886492_A_G | chr19:47886492 | -0.314 | -0.373 | -0.278 | — |
| chr19_47886394_T_C | chr19:47886394 | 0.313 | 0.312 | 0.132 | — |
| chr19_47886470_G_A | chr19:47886470 | -0.312 | -0.345 | -0.335 | — |
| chr19_47886450_T_C | chr19:47886450 | 0.311 | 0.274 | 0.282 | — |
| chr19_47886407_T_C | chr19:47886407 | -0.310 | -0.289 | -0.162 | — |
| chr19_47886424_T_G | chr19:47886424 | 0.308 | 0.365 | 0.185 | — |
| chr19_47886488_T_A | chr19:47886488 | 0.307 | 0.368 | 0.294 | — |
| chr19_47886391_T_C | chr19:47886391 | -0.306 | -0.398 | -0.206 | — |
| chr19_47886484_A_G | chr19:47886484 | 0.306 | 0.376 | 0.256 | — |
| chr19_47886491_T_C | chr19:47886491 | 0.306 | 0.404 | 0.221 | — |
| chr19_47886446_A_G | chr19:47886446 | 0.304 | 0.386 | 0.224 | — |
| chr19_47886451_G_T | chr19:47886451 | -0.303 | -0.409 | -0.235 | — |
| chr19_47886474_T_G | chr19:47886474 | -0.301 | -0.325 | -0.109 | — |
| chr19_47886461_A_T | chr19:47886461 | 0.300 | 0.360 | 0.262 | — |
| chr19_47886382_G_T | chr19:47886382 | -0.296 | -0.393 | -0.294 | — |
| chr19_47886386_C_T | chr19:47886386 | -0.296 | -0.431 | -0.274 | — |
| chr19_47886434_C_G | chr19:47886434 | -0.296 | -0.437 | -0.338 | — |
| chr19_47886443_A_G | chr19:47886443 | 0.293 | 0.292 | 0.188 | — |
| chr19_47886452_A_G | chr19:47886452 | 0.291 | 0.297 | 0.265 | — |
| chr19_47886422_G_C | chr19:47886422 | -0.290 | -0.338 | -0.324 | — |
| chr19_47886517_G_T | chr19:47886517 | -0.289 | -0.363 | -0.246 | — |
| chr19_47886405_A_G | chr19:47886405 | -0.286 | -0.373 | -0.309 | — |
| chr19_47886466_T_C | chr19:47886466 | -0.286 | -0.315 | -0.265 | — |
| chr19_47886506_C_T | chr19:47886506 | 0.286 | 0.353 | 0.168 | — |
| chr19_47886389_G_A | chr19:47886389 | -0.285 | -0.350 | -0.265 | — |
| chr19_47886397_T_A | chr19:47886397 | 0.285 | 0.508 | 0.182 | — |
| chr19_47886486_C_G | chr19:47886486 | -0.285 | -0.292 | -0.241 | — |
| chr19_47886446_A_T | chr19:47886446 | 0.281 | 0.272 | 0.265 | — |
| chr19_47886429_T_G | chr19:47886429 | -0.280 | -0.241 | -0.147 | — |
| chr19_47886447_G_A | chr19:47886447 | -0.278 | -0.277 | -0.132 | — |
| chr19_47886461_A_C | chr19:47886461 | 0.276 | 0.287 | 0.326 | — |
| chr19_47886388_T_C | chr19:47886388 | -0.275 | -0.312 | -0.206 | — |
| chr19_47886411_T_A | chr19:47886411 | -0.273 | -0.282 | -0.203 | — |
| chr19_47886422_G_A | chr19:47886422 | -0.271 | -0.277 | -0.294 | — |
| chr19_47886419_A_C | chr19:47886419 | 0.270 | 0.272 | 0.176 | — |
| chr19_47886404_T_A | chr19:47886404 | -0.266 | -0.299 | -0.250 | — |
| chr19_47886421_A_G | chr19:47886421 | -0.265 | -0.256 | -0.191 | — |
| chr19_47886427_A_G | chr19:47886427 | 0.261 | 0.338 | 0.088 | — |
| chr19_47886494_G_T | chr19:47886494 | -0.261 | -0.353 | -0.165 | — |
| chr19_47886395_T_G | chr19:47886395 | -0.259 | -0.464 | -0.338 | — |
| chr19_47886418_G_A | chr19:47886418 | -0.258 | -0.259 | -0.221 | — |
| chr19_47886497_T_A | chr19:47886497 | -0.258 | -0.426 | -0.124 | — |
| chr19_47886383_T_G | chr19:47886383 | -0.256 | -0.264 | -0.162 | — |
| chr19_47886496_G_A | chr19:47886496 | -0.254 | -0.350 | -0.179 | — |
| chr19_47886396_G_A | chr19:47886396 | -0.253 | -0.287 | -0.232 | — |
| chr19_47886545_A_C | chr19:47886545 | -0.253 | -0.315 | -0.162 | — |
| chr19_47886444_A_T | chr19:47886444 | -0.252 | -0.274 | -0.182 | — |
| chr19_47886489_T_C | chr19:47886489 | -0.251 | -0.165 | -0.209 | — |
| chr19_47886433_A_C | chr19:47886433 | -0.250 | -0.307 | -0.141 | — |
| chr19_47886493_G_A | chr19:47886493 | -0.250 | -0.305 | -0.221 | — |
| chr19_47886525_A_T | chr19:47886525 | -0.250 | -0.279 | -0.182 | — |
| chr19_47886448_A_G | chr19:47886448 | 0.248 | 0.360 | 0.194 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.