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SNX6
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SNX6
chr14:34,461,092..34,730,148, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr14_34630046_G_C | chr14:34630046 | -0.413 | -0.310 | -1.000 | 0.0013% |
| chr14_34630057_G_C | chr14:34630057 | -0.504 | -0.294 | -1.000 | — |
| chr14_34630059_G_C | chr14:34630059 | -0.433 | -0.319 | -1.000 | — |
| chr14_34630063_G_C | chr14:34630063 | -0.369 | -0.286 | -1.000 | — |
| chr14_34462564_C_A | chr14:34462564 | 0.850 | 0.494 | 1.000 | — |
| chr14_34630048_G_C | chr14:34630048 | -0.338 | -0.258 | -1.000 | — |
| chr14_34630072_A_C | chr14:34630072 | -0.300 | -0.148 | -1.000 | — |
| chr14_34630065_T_C | chr14:34630065 | -0.256 | -0.217 | -1.000 | — |
| chr14_34462487_C_T | chr14:34462487 | 0.629 | 0.144 | 0.844 | — |
| chr14_34630053_C_T | chr14:34630053 | 0.215 | 0.212 | 0.988 | <0.001% |
| chr14_34630055_C_A | chr14:34630055 | 0.253 | 0.211 | 0.953 | — |
| chr14_34630070_C_T | chr14:34630070 | 0.230 | 0.185 | 0.929 | — |
| chr14_34630053_C_A | chr14:34630053 | 0.213 | 0.197 | 0.918 | — |
| chr14_34630054_C_T | chr14:34630054 | 0.241 | 0.211 | 0.918 | — |
| chr14_34630055_C_T | chr14:34630055 | 0.260 | 0.213 | 0.894 | — |
| chr14_34462560_G_A | chr14:34462560 | 0.504 | 0.108 | 0.482 | — |
| chr14_34630050_C_A | chr14:34630050 | 0.176 | 0.175 | 0.882 | — |
| chr14_34630054_C_A | chr14:34630054 | 0.286 | 0.178 | 0.871 | — |
| chr14_34630049_C_T | chr14:34630049 | 0.165 | 0.206 | 0.859 | — |
| chr14_34630049_C_A | chr14:34630049 | 0.161 | 0.198 | 0.835 | — |
| chr14_34462560_G_T | chr14:34462560 | 0.471 | 0.094 | 0.488 | — |
| chr14_34630050_C_T | chr14:34630050 | 0.165 | 0.162 | 0.824 | — |
| chr14_34630056_C_A | chr14:34630056 | 0.180 | 0.185 | 0.824 | — |
| chr14_34462539_C_G | chr14:34462539 | -0.461 | 0.035 | -0.026 | — |
| chr14_34462561_G_A | chr14:34462561 | 0.453 | 0.122 | 0.650 | <0.001% |
| chr14_34462485_C_T | chr14:34462485 | 0.449 | 0.090 | 0.471 | — |
| chr14_34630060_C_T | chr14:34630060 | 0.151 | 0.150 | 0.788 | <0.001% |
| chr14_34462551_G_T | chr14:34462551 | 0.260 | 0.196 | 0.782 | — |
| chr14_34630068_C_T | chr14:34630068 | 0.196 | 0.127 | 0.776 | 0.0020% |
| chr14_34462535_T_C | chr14:34462535 | -0.275 | -0.085 | -0.774 | — |
| chr14_34462489_G_C | chr14:34462489 | -0.436 | 0.033 | 0.032 | — |
| chr14_34462556_C_A | chr14:34462556 | 0.195 | 0.119 | 0.768 | — |
| chr14_34462559_G_A | chr14:34462559 | 0.426 | 0.106 | 0.503 | — |
| chr14_34630070_C_A | chr14:34630070 | 0.213 | 0.140 | 0.753 | — |
| chr14_34630071_C_T | chr14:34630071 | 0.183 | 0.141 | 0.753 | — |
| chr14_34462561_G_T | chr14:34462561 | 0.424 | 0.108 | 0.462 | — |
| chr14_34462489_G_A | chr14:34462489 | -0.419 | 0.025 | 0.200 | — |
| chr14_34630051_C_A | chr14:34630051 | 0.151 | 0.157 | 0.741 | — |
| chr14_34630051_C_T | chr14:34630051 | 0.160 | 0.173 | 0.741 | <0.001% |
| chr14_34630053_C_G | chr14:34630053 | 0.250 | 0.151 | 0.741 | — |
| chr14_34630069_C_T | chr14:34630069 | 0.211 | 0.145 | 0.741 | — |
| chr14_34462546_T_C | chr14:34462546 | -0.156 | -0.086 | -0.735 | — |
| chr14_34630056_C_T | chr14:34630056 | 0.131 | 0.150 | 0.706 | — |
| chr14_34462512_A_C | chr14:34462512 | -0.394 | 0.011 | -0.547 | — |
| chr14_34630061_C_T | chr14:34630061 | 0.163 | 0.164 | 0.694 | — |
| chr14_34462555_G_T | chr14:34462555 | 0.050 | 0.096 | 0.688 | — |
| chr14_34462502_G_C | chr14:34462502 | -0.386 | -0.025 | -0.321 | — |
| chr14_34630069_C_A | chr14:34630069 | 0.196 | 0.129 | 0.682 | — |
| chr14_34462565_C_T | chr14:34462565 | 0.067 | 0.076 | 0.679 | — |
| chr14_34462492_A_C | chr14:34462492 | -0.383 | -0.084 | -0.632 | — |
| chr14_34462497_G_C | chr14:34462497 | -0.383 | 0.004 | -0.171 | — |
| chr14_34462546_T_G | chr14:34462546 | -0.223 | -0.098 | -0.676 | — |
| chr14_34462560_G_C | chr14:34462560 | 0.381 | 0.016 | -0.085 | <0.001% |
| chr14_34462518_C_T | chr14:34462518 | 0.121 | 0.107 | 0.662 | — |
| chr14_34462550_T_C | chr14:34462550 | -0.111 | -0.074 | -0.659 | — |
| chr14_34630045_C_T | chr14:34630045 | 0.105 | 0.152 | 0.659 | — |
| chr14_34462536_G_C | chr14:34462536 | -0.371 | -0.059 | -0.556 | — |
| chr14_34462561_G_C | chr14:34462561 | 0.371 | 0.042 | 0.097 | — |
| chr14_34462533_G_A | chr14:34462533 | 0.161 | 0.113 | 0.641 | — |
| chr14_34462529_C_A | chr14:34462529 | -0.025 | 0.092 | 0.638 | <0.001% |
| chr14_34630049_C_G | chr14:34630049 | 0.191 | 0.152 | 0.635 | — |
| chr14_34462520_C_T | chr14:34462520 | 0.043 | 0.093 | 0.632 | <0.001% |
| chr14_34462541_G_C | chr14:34462541 | -0.273 | -0.076 | -0.632 | — |
| chr14_34462556_C_T | chr14:34462556 | 0.080 | 0.083 | 0.624 | — |
| chr14_34462494_A_C | chr14:34462494 | -0.349 | -0.071 | -0.547 | — |
| chr14_34630067_C_A | chr14:34630067 | 0.113 | 0.169 | 0.612 | 0.0013% |
| chr14_34630071_C_A | chr14:34630071 | 0.180 | 0.126 | 0.612 | — |
| chr14_34462507_G_C | chr14:34462507 | -0.343 | 0.004 | -0.218 | — |
| chr14_34462548_A_G | chr14:34462548 | -0.057 | -0.068 | -0.606 | — |
| chr14_34462554_G_T | chr14:34462554 | 0.111 | 0.084 | 0.606 | — |
| chr14_34462523_G_T | chr14:34462523 | 0.018 | 0.079 | 0.603 | — |
| chr14_34462548_A_C | chr14:34462548 | -0.062 | -0.079 | -0.600 | — |
| chr14_34630045_C_A | chr14:34630045 | 0.163 | 0.178 | 0.600 | — |
| chr14_34630061_C_A | chr14:34630061 | 0.148 | 0.115 | 0.600 | — |
| chr14_34630067_C_T | chr14:34630067 | 0.105 | 0.090 | 0.600 | — |
| chr14_34630068_C_A | chr14:34630068 | 0.233 | 0.119 | 0.600 | — |
| chr14_34462542_G_C | chr14:34462542 | -0.195 | -0.086 | -0.597 | — |
| chr14_34462563_C_T | chr14:34462563 | 0.281 | 0.152 | 0.597 | — |
| chr14_34462492_A_T | chr14:34462492 | -0.336 | -0.018 | 0.035 | — |
| chr14_34462523_G_A | chr14:34462523 | 0.000 | 0.073 | 0.594 | — |
| chr14_34462565_C_A | chr14:34462565 | 0.168 | 0.089 | 0.591 | — |
| chr14_34462573_C_T | chr14:34462573 | 0.165 | 0.076 | 0.588 | — |
| chr14_34630044_C_T | chr14:34630044 | 0.121 | 0.112 | 0.588 | <0.001% |
| chr14_34462524_C_T | chr14:34462524 | 0.033 | 0.087 | 0.585 | — |
| chr14_34462558_G_A | chr14:34462558 | 0.113 | 0.076 | 0.579 | — |
| chr14_34462468_G_C | chr14:34462468 | -0.323 | -0.051 | -0.076 | — |
| chr14_34462496_C_T | chr14:34462496 | 0.000 | 0.091 | 0.571 | — |
| chr14_34462520_C_A | chr14:34462520 | -0.005 | 0.075 | 0.571 | — |
| chr14_34462497_G_T | chr14:34462497 | 0.183 | 0.086 | 0.568 | — |
| chr14_34462537_G_C | chr14:34462537 | -0.245 | -0.058 | -0.568 | — |
| chr14_34462489_G_T | chr14:34462489 | -0.319 | 0.053 | 0.274 | — |
| chr14_34462574_C_A | chr14:34462574 | 0.188 | 0.069 | 0.565 | <0.001% |
| chr14_34630042_C_T | chr14:34630042 | 0.145 | 0.142 | 0.565 | — |
| chr14_34630062_C_A | chr14:34630062 | 0.115 | 0.100 | 0.565 | — |
| chr14_34462524_C_A | chr14:34462524 | -0.010 | 0.060 | 0.562 | — |
| chr14_34462535_T_G | chr14:34462535 | -0.256 | -0.059 | -0.562 | — |
| chr14_34462544_C_G | chr14:34462544 | -0.313 | -0.031 | -0.353 | — |
| chr14_34630060_C_G | chr14:34630060 | 0.230 | 0.114 | 0.553 | — |
| chr14_34630064_C_A | chr14:34630064 | 0.048 | 0.114 | 0.553 | — |
| chr14_34462571_C_T | chr14:34462571 | 0.196 | 0.086 | 0.551 | — |
| chr14_34462559_G_T | chr14:34462559 | 0.296 | 0.091 | 0.547 | — |
| chr14_34462516_C_A | chr14:34462516 | 0.038 | 0.032 | 0.544 | — |
| chr14_34462553_C_T | chr14:34462553 | 0.175 | 0.106 | 0.544 | — |
| chr14_34462576_C_T | chr14:34462576 | 0.115 | 0.080 | 0.544 | — |
| chr14_34462494_A_T | chr14:34462494 | -0.306 | 0.001 | 0.029 | — |
| chr14_34630047_C_T | chr14:34630047 | 0.047 | 0.114 | 0.541 | 0.0020% |
| chr14_34630052_G_C | chr14:34630052 | -0.240 | -0.005 | -0.541 | — |
| chr14_34630060_C_A | chr14:34630060 | 0.097 | 0.119 | 0.541 | — |
| chr14_34630073_C_A | chr14:34630073 | 0.077 | 0.126 | 0.541 | — |
| chr14_34462528_C_T | chr14:34462528 | -0.010 | 0.063 | 0.538 | — |
| chr14_34462532_T_C | chr14:34462532 | -0.103 | -0.047 | -0.538 | 0.0027% |
| chr14_34462490_C_G | chr14:34462490 | -0.303 | -0.013 | -0.053 | — |
| chr14_34462551_G_A | chr14:34462551 | 0.083 | 0.077 | 0.535 | <0.001% |
| chr14_34462557_C_T | chr14:34462557 | 0.048 | 0.064 | 0.529 | — |
| chr14_34462525_C_A | chr14:34462525 | -0.008 | 0.043 | 0.526 | — |
| chr14_34462494_A_G | chr14:34462494 | -0.296 | -0.035 | -0.285 | — |
| chr14_34462528_C_A | chr14:34462528 | 0.010 | 0.084 | 0.524 | — |
| chr14_34462501_A_C | chr14:34462501 | -0.133 | -0.041 | -0.521 | — |
| chr14_34462575_G_T | chr14:34462575 | -0.033 | 0.054 | 0.519 | — |
| chr14_34630055_C_G | chr14:34630055 | 0.285 | 0.140 | 0.518 | — |
| chr14_34462495_G_T | chr14:34462495 | 0.223 | 0.088 | 0.515 | — |
| chr14_34462460_T_A | chr14:34462460 | 0.290 | 0.008 | 0.309 | — |
| chr14_34462553_C_A | chr14:34462553 | 0.068 | 0.076 | 0.512 | — |
| chr14_34462572_C_T | chr14:34462572 | 0.220 | 0.086 | 0.512 | — |
| chr14_34462518_C_A | chr14:34462518 | 0.033 | 0.065 | 0.509 | — |
| chr14_34462490_C_A | chr14:34462490 | -0.286 | 0.025 | 0.156 | — |
| chr14_34630047_C_A | chr14:34630047 | 0.073 | 0.102 | 0.506 | <0.001% |
| chr14_34630054_C_G | chr14:34630054 | 0.258 | 0.102 | 0.506 | — |
| chr14_34462460_T_C | chr14:34462460 | 0.283 | 0.012 | 0.229 | — |
| chr14_34462481_C_G | chr14:34462481 | -0.283 | -0.001 | -0.126 | — |
| chr14_34462508_C_T | chr14:34462508 | -0.002 | 0.093 | 0.500 | — |
| chr14_34462559_G_C | chr14:34462559 | 0.283 | 0.002 | -0.162 | — |
| chr14_34462541_G_T | chr14:34462541 | 0.153 | 0.042 | 0.497 | — |
| chr14_34462591_T_G | chr14:34462591 | -0.058 | -0.074 | -0.496 | — |
| chr14_34462490_C_T | chr14:34462490 | -0.280 | 0.023 | 0.297 | — |
| chr14_34462491_G_C | chr14:34462491 | -0.280 | -0.007 | -0.132 | 0.0013% |
| chr14_34462510_C_T | chr14:34462510 | 0.105 | 0.058 | 0.494 | — |
| chr14_34630041_T_C | chr14:34630041 | -0.085 | -0.093 | -0.494 | — |
| chr14_34462485_C_A | chr14:34462485 | -0.273 | -0.033 | -0.156 | — |
| chr14_34462527_G_T | chr14:34462527 | -0.043 | 0.093 | 0.482 | — |
| chr14_34462574_C_T | chr14:34462574 | 0.133 | 0.060 | 0.482 | <0.001% |
| chr14_34630062_C_T | chr14:34630062 | 0.057 | 0.090 | 0.482 | <0.001% |
| chr14_34630063_G_T | chr14:34630063 | 0.027 | 0.148 | 0.482 | — |
| chr14_34630064_C_G | chr14:34630064 | 0.093 | 0.076 | 0.482 | — |
| chr14_34630064_C_T | chr14:34630064 | 0.040 | 0.107 | 0.482 | — |
| chr14_34462511_C_T | chr14:34462511 | 0.007 | 0.013 | 0.479 | — |
| chr14_34462467_C_T | chr14:34462467 | 0.270 | 0.030 | 0.315 | — |
| chr14_34462558_G_T | chr14:34462558 | 0.270 | 0.082 | 0.447 | <0.001% |
| chr14_34462519_C_A | chr14:34462519 | 0.068 | 0.025 | 0.474 | — |
| chr14_34462492_A_G | chr14:34462492 | -0.266 | -0.035 | -0.332 | — |
| chr14_34629964_C_G | chr14:34629964 | -0.095 | -0.136 | -0.471 | — |
| chr14_34630043_C_T | chr14:34630043 | 0.100 | 0.117 | 0.471 | <0.001% |
| chr14_34630050_C_G | chr14:34630050 | 0.136 | 0.107 | 0.471 | — |
| chr14_34630051_C_G | chr14:34630051 | 0.193 | 0.114 | 0.471 | — |
| chr14_34630052_G_T | chr14:34630052 | 0.035 | 0.107 | 0.471 | — |
| chr14_34462495_G_A | chr14:34462495 | 0.070 | 0.037 | 0.468 | — |
| chr14_34462510_C_A | chr14:34462510 | 0.158 | 0.029 | 0.465 | — |
| chr14_34462540_G_C | chr14:34462540 | -0.243 | -0.047 | -0.465 | 0.0079% |
| chr14_34462466_A_T | chr14:34462466 | 0.260 | 0.025 | 0.203 | — |
| chr14_34462467_C_A | chr14:34462467 | 0.260 | 0.021 | 0.279 | — |
| chr14_34462480_A_T | chr14:34462480 | 0.260 | 0.051 | 0.288 | — |
| chr14_34462491_G_A | chr14:34462491 | -0.260 | 0.020 | 0.035 | — |
| chr14_34462505_G_T | chr14:34462505 | 0.047 | 0.076 | 0.459 | — |
| chr14_34462566_G_T | chr14:34462566 | 0.045 | 0.049 | 0.459 | — |
| chr14_34462587_G_A | chr14:34462587 | 0.095 | 0.058 | 0.459 | — |
| chr14_34462476_G_T | chr14:34462476 | 0.163 | 0.087 | 0.456 | — |
| chr14_34462526_G_A | chr14:34462526 | 0.040 | 0.036 | 0.456 | — |
| chr14_34462531_G_T | chr14:34462531 | 0.120 | 0.029 | 0.456 | — |
| chr14_34462550_T_G | chr14:34462550 | -0.093 | -0.053 | -0.456 | <0.001% |
| chr14_34462493_G_A | chr14:34462493 | -0.256 | 0.015 | 0.071 | — |
| chr14_34462498_C_T | chr14:34462498 | -0.023 | 0.053 | 0.453 | — |
| chr14_34462525_C_T | chr14:34462525 | -0.027 | 0.046 | 0.453 | 0.0013% |
| chr14_34462557_C_A | chr14:34462557 | -0.087 | 0.053 | 0.453 | — |
| chr14_34462567_G_A | chr14:34462567 | 0.027 | 0.042 | 0.453 | — |
| chr14_34462500_C_T | chr14:34462500 | 0.116 | 0.068 | 0.450 | — |
| chr14_34462517_G_T | chr14:34462517 | 0.042 | 0.081 | 0.450 | — |
| chr14_34462549_G_T | chr14:34462549 | -0.005 | 0.067 | 0.450 | — |
| chr14_34462568_G_C | chr14:34462568 | -0.062 | -0.054 | -0.450 | — |
| chr14_34462519_C_T | chr14:34462519 | 0.100 | 0.057 | 0.447 | — |
| chr14_34462526_G_T | chr14:34462526 | 0.023 | 0.063 | 0.447 | — |
| chr14_34462530_G_A | chr14:34462530 | 0.010 | 0.055 | 0.447 | — |
| chr14_34629905_A_C | chr14:34629905 | 0.042 | -0.036 | 0.447 | — |
| chr14_34630043_C_A | chr14:34630043 | 0.121 | 0.102 | 0.447 | — |
| chr14_34630047_C_G | chr14:34630047 | 0.110 | 0.114 | 0.447 | — |
| chr14_34462514_C_T | chr14:34462514 | 0.005 | 0.034 | 0.444 | 0.0020% |
| chr14_34462552_C_T | chr14:34462552 | 0.022 | 0.055 | 0.444 | — |
| chr14_34462566_G_A | chr14:34462566 | 0.025 | 0.052 | 0.444 | — |
| chr14_34462463_C_A | chr14:34462463 | 0.250 | 0.072 | 0.326 | — |
| chr14_34462509_C_T | chr14:34462509 | 0.150 | 0.098 | 0.441 | — |
| chr14_34462538_G_T | chr14:34462538 | -0.250 | 0.020 | 0.129 | — |
| chr14_34462503_C_A | chr14:34462503 | 0.073 | 0.083 | 0.438 | — |
| chr14_34462567_G_T | chr14:34462567 | 0.033 | 0.042 | 0.438 | — |
| chr14_34462522_G_T | chr14:34462522 | 0.110 | 0.025 | 0.435 | 0.0020% |
| chr14_34630058_C_T | chr14:34630058 | 0.005 | 0.089 | 0.435 | — |
| chr14_34630072_A_G | chr14:34630072 | -0.008 | -0.079 | -0.435 | — |
| chr14_34462516_C_T | chr14:34462516 | -0.023 | 0.020 | 0.432 | — |
| chr14_34462538_G_C | chr14:34462538 | -0.245 | -0.039 | -0.426 | — |
| chr14_34462465_C_T | chr14:34462465 | 0.213 | 0.084 | 0.426 | — |
| chr14_34462478_G_A | chr14:34462478 | 0.053 | 0.100 | 0.426 | — |
| chr14_34462557_C_G | chr14:34462557 | -0.241 | -0.031 | -0.159 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.