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SPATA21
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SPATA21
chr1:16,295,680..16,537,424, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_16367217_C_G | chr1:16367217 | -0.419 | -0.873 | -1.000 | — |
| chr1_16367236_A_G | chr1:16367236 | -0.441 | -0.569 | -1.000 | 0.0014% |
| chr1_16367239_A_G | chr1:16367239 | -0.116 | -0.492 | -1.000 | — |
| chr1_16367219_C_G | chr1:16367219 | -0.156 | -0.602 | -0.894 | — |
| chr1_16367224_A_G | chr1:16367224 | -0.411 | -0.340 | -0.882 | — |
| chr1_16367228_G_C | chr1:16367228 | 0.151 | 0.470 | 0.882 | — |
| chr1_16367232_G_C | chr1:16367232 | -0.033 | 0.340 | 0.871 | — |
| chr1_16367232_G_A | chr1:16367232 | -0.012 | 0.457 | 0.824 | — |
| chr1_16367230_T_G | chr1:16367230 | -0.451 | -0.241 | -0.671 | 0.037% |
| chr1_16367228_G_T | chr1:16367228 | 0.176 | 0.472 | 0.788 | — |
| chr1_16367226_G_C | chr1:16367226 | 0.175 | 0.365 | 0.776 | 0.0021% |
| chr1_16367228_G_A | chr1:16367228 | 0.211 | 0.495 | 0.776 | — |
| chr1_16367232_G_T | chr1:16367232 | 0.007 | 0.434 | 0.776 | — |
| chr1_16367227_G_C | chr1:16367227 | 0.153 | 0.429 | 0.765 | — |
| chr1_16367227_G_T | chr1:16367227 | 0.146 | 0.401 | 0.729 | — |
| chr1_16367231_G_C | chr1:16367231 | -0.203 | 0.211 | 0.706 | 0.307% |
| chr1_16367226_G_A | chr1:16367226 | 0.136 | 0.381 | 0.659 | — |
| chr1_16367221_G_C | chr1:16367221 | 0.143 | 0.358 | 0.647 | — |
| chr1_16367227_G_A | chr1:16367227 | 0.131 | 0.401 | 0.647 | — |
| chr1_16367229_G_C | chr1:16367229 | 0.077 | 0.376 | 0.647 | — |
| chr1_16367231_G_A | chr1:16367231 | -0.007 | 0.317 | 0.647 | 0.0029% |
| chr1_16367233_G_C | chr1:16367233 | -0.082 | 0.320 | 0.647 | — |
| chr1_16367247_C_G | chr1:16367247 | -0.255 | -0.277 | -0.647 | — |
| chr1_16367221_G_T | chr1:16367221 | 0.166 | 0.396 | 0.635 | — |
| chr1_16367222_G_C | chr1:16367222 | 0.125 | 0.393 | 0.624 | 0.0014% |
| chr1_16367233_G_A | chr1:16367233 | -0.025 | 0.378 | 0.612 | — |
| chr1_16367267_G_A | chr1:16367267 | 0.343 | -0.036 | 0.282 | — |
| chr1_16367088_A_C | chr1:16367088 | -0.339 | -0.129 | -0.006 | — |
| chr1_16367311_A_C | chr1:16367311 | 0.020 | 0.132 | 0.600 | — |
| chr1_16367153_G_C | chr1:16367153 | 0.333 | 0.145 | 0.106 | — |
| chr1_16367226_G_T | chr1:16367226 | 0.065 | 0.325 | 0.588 | 0.0021% |
| chr1_16367225_G_C | chr1:16367225 | 0.133 | 0.284 | 0.576 | — |
| chr1_16367250_C_G | chr1:16367250 | -0.236 | -0.330 | -0.576 | — |
| chr1_16367311_A_T | chr1:16367311 | 0.050 | 0.099 | 0.576 | — |
| chr1_16367094_G_C | chr1:16367094 | -0.323 | -0.069 | -0.194 | — |
| chr1_16367243_A_G | chr1:16367243 | -0.027 | -0.279 | -0.565 | — |
| chr1_16367222_G_T | chr1:16367222 | 0.148 | 0.411 | 0.553 | — |
| chr1_16367233_G_T | chr1:16367233 | -0.063 | 0.297 | 0.553 | — |
| chr1_16367241_G_C | chr1:16367241 | 0.093 | 0.391 | 0.553 | — |
| chr1_16367152_C_G | chr1:16367152 | -0.246 | -0.005 | -0.541 | — |
| chr1_16367221_G_A | chr1:16367221 | 0.120 | 0.386 | 0.541 | — |
| chr1_16367229_G_A | chr1:16367229 | 0.082 | 0.312 | 0.541 | — |
| chr1_16367229_G_T | chr1:16367229 | 0.116 | 0.312 | 0.541 | — |
| chr1_16367310_T_A | chr1:16367310 | -0.027 | 0.046 | 0.541 | — |
| chr1_16367310_T_C | chr1:16367310 | -0.003 | 0.086 | 0.541 | — |
| chr1_16367095_C_G | chr1:16367095 | -0.301 | 0.135 | -0.076 | — |
| chr1_16367223_G_C | chr1:16367223 | 0.098 | 0.254 | 0.529 | — |
| chr1_16367231_G_T | chr1:16367231 | 0.075 | 0.228 | 0.529 | 0.0039% |
| chr1_16367238_G_C | chr1:16367238 | 0.047 | 0.137 | 0.529 | — |
| chr1_16367309_G_T | chr1:16367309 | 0.047 | 0.109 | 0.529 | — |
| chr1_16367234_G_C | chr1:16367234 | -0.151 | 0.112 | 0.518 | — |
| chr1_16367312_A_G | chr1:16367312 | 0.113 | 0.046 | 0.518 | 0.0013% |
| chr1_16367225_G_A | chr1:16367225 | 0.090 | 0.259 | 0.494 | — |
| chr1_16367309_G_C | chr1:16367309 | 0.030 | 0.051 | 0.494 | — |
| chr1_16367310_T_G | chr1:16367310 | -0.020 | 0.053 | 0.494 | — |
| chr1_16367222_G_A | chr1:16367222 | 0.145 | 0.386 | 0.482 | — |
| chr1_16367225_G_T | chr1:16367225 | 0.110 | 0.216 | 0.482 | — |
| chr1_16367235_G_A | chr1:16367235 | 0.080 | 0.178 | 0.482 | <0.001% |
| chr1_16367308_G_C | chr1:16367308 | 0.073 | 0.089 | 0.482 | — |
| chr1_16367312_A_C | chr1:16367312 | 0.047 | 0.086 | 0.482 | — |
| chr1_16367092_T_A | chr1:16367092 | -0.266 | -0.063 | -0.041 | — |
| chr1_16367093_G_T | chr1:16367093 | -0.266 | -0.051 | -0.059 | — |
| chr1_16367262_A_C | chr1:16367262 | 0.201 | 0.206 | 0.471 | — |
| chr1_16367091_A_C | chr1:16367091 | -0.260 | -0.071 | 0.018 | — |
| chr1_16367234_G_A | chr1:16367234 | -0.083 | 0.127 | 0.459 | — |
| chr1_16367115_G_C | chr1:16367115 | 0.258 | 0.266 | 0.329 | — |
| chr1_16367093_G_A | chr1:16367093 | -0.256 | -0.048 | -0.065 | — |
| chr1_16367189_G_C | chr1:16367189 | -0.256 | -0.066 | -0.129 | — |
| chr1_16367288_G_T | chr1:16367288 | 0.256 | 0.162 | 0.153 | — |
| chr1_16367223_G_A | chr1:16367223 | 0.082 | 0.234 | 0.447 | — |
| chr1_16367240_G_C | chr1:16367240 | 0.070 | 0.297 | 0.447 | — |
| chr1_16367265_A_G | chr1:16367265 | 0.203 | 0.274 | 0.447 | — |
| chr1_16367094_G_A | chr1:16367094 | -0.246 | -0.018 | -0.259 | — |
| chr1_16367114_G_T | chr1:16367114 | 0.246 | 0.472 | 0.265 | — |
| chr1_16367242_G_C | chr1:16367242 | 0.111 | 0.279 | 0.435 | — |
| chr1_16367252_A_G | chr1:16367252 | -0.153 | -0.195 | -0.435 | — |
| chr1_16367238_G_T | chr1:16367238 | 0.073 | 0.140 | 0.424 | — |
| chr1_16367309_G_A | chr1:16367309 | -0.037 | 0.025 | 0.424 | — |
| chr1_16367210_G_T | chr1:16367210 | -0.238 | -0.475 | -0.082 | — |
| chr1_16367234_G_T | chr1:16367234 | -0.042 | 0.180 | 0.412 | — |
| chr1_16367241_G_T | chr1:16367241 | 0.087 | 0.350 | 0.412 | — |
| chr1_16367242_G_T | chr1:16367242 | 0.133 | 0.289 | 0.412 | — |
| chr1_16367220_G_T | chr1:16367220 | 0.083 | 0.168 | 0.400 | <0.001% |
| chr1_16367235_G_C | chr1:16367235 | 0.163 | 0.175 | 0.400 | — |
| chr1_16367237_G_C | chr1:16367237 | 0.008 | 0.112 | 0.400 | — |
| chr1_16367238_G_A | chr1:16367238 | 0.032 | 0.190 | 0.400 | — |
| chr1_16367259_T_C | chr1:16367259 | -0.053 | 0.239 | 0.400 | — |
| chr1_16367269_G_C | chr1:16367269 | 0.020 | 0.112 | 0.400 | <0.001% |
| chr1_16367308_G_A | chr1:16367308 | 0.047 | 0.048 | 0.400 | — |
| chr1_16367308_G_T | chr1:16367308 | 0.080 | 0.051 | 0.400 | — |
| chr1_16367313_G_C | chr1:16367313 | 0.043 | 0.112 | 0.400 | — |
| chr1_16367199_C_G | chr1:16367199 | -0.223 | -0.198 | -0.318 | — |
| chr1_16367132_C_A | chr1:16367132 | 0.221 | -0.036 | -0.012 | — |
| chr1_16367091_A_T | chr1:16367091 | -0.220 | 0.028 | -0.018 | — |
| chr1_16367093_G_C | chr1:16367093 | -0.220 | 0.000 | -0.029 | — |
| chr1_16367121_G_A | chr1:16367121 | 0.220 | 0.135 | 0.265 | <0.001% |
| chr1_16367218_G_A | chr1:16367218 | -0.005 | -0.231 | 0.388 | — |
| chr1_16367223_G_T | chr1:16367223 | 0.115 | 0.173 | 0.388 | — |
| chr1_16367242_G_A | chr1:16367242 | 0.055 | 0.244 | 0.388 | <0.001% |
| chr1_16367105_G_T | chr1:16367105 | -0.215 | -0.041 | -0.153 | — |
| chr1_16367110_C_A | chr1:16367110 | -0.215 | -0.081 | -0.159 | — |
| chr1_16367134_T_C | chr1:16367134 | 0.213 | -0.124 | 0.024 | — |
| chr1_16367216_G_A | chr1:16367216 | 0.097 | -0.010 | 0.376 | — |
| chr1_16367241_G_A | chr1:16367241 | 0.093 | 0.327 | 0.376 | <0.001% |
| chr1_16367150_G_T | chr1:16367150 | 0.210 | -0.071 | 0.271 | — |
| chr1_16367215_G_C | chr1:16367215 | 0.130 | 0.140 | 0.365 | — |
| chr1_16367216_G_C | chr1:16367216 | 0.097 | -0.008 | 0.365 | — |
| chr1_16367239_A_C | chr1:16367239 | -0.170 | -0.175 | -0.365 | — |
| chr1_16367262_A_T | chr1:16367262 | 0.206 | 0.170 | 0.329 | — |
| chr1_16367092_T_G | chr1:16367092 | -0.203 | 0.071 | 0.041 | — |
| chr1_16367114_G_C | chr1:16367114 | 0.201 | 0.292 | 0.218 | — |
| chr1_16367132_C_G | chr1:16367132 | 0.201 | -0.023 | 0.035 | — |
| chr1_16367088_A_T | chr1:16367088 | -0.200 | 0.008 | -0.071 | — |
| chr1_16367267_G_T | chr1:16367267 | 0.200 | 0.015 | 0.318 | — |
| chr1_16367210_G_A | chr1:16367210 | -0.198 | -0.236 | -0.082 | — |
| chr1_16367189_G_A | chr1:16367189 | -0.196 | 0.048 | -0.035 | — |
| chr1_16367095_C_A | chr1:16367095 | -0.195 | -0.058 | -0.165 | — |
| chr1_16367178_T_C | chr1:16367178 | -0.093 | -0.096 | -0.341 | — |
| chr1_16367213_C_G | chr1:16367213 | -0.193 | -0.490 | -0.318 | — |
| chr1_16367250_C_T | chr1:16367250 | -0.003 | 0.025 | 0.341 | — |
| chr1_16367091_A_G | chr1:16367091 | -0.190 | 0.203 | 0.106 | — |
| chr1_16367164_A_C | chr1:16367164 | 0.186 | 0.155 | 0.224 | — |
| chr1_16367217_C_T | chr1:16367217 | 0.017 | -0.109 | 0.329 | — |
| chr1_16367264_G_C | chr1:16367264 | 0.050 | -0.033 | 0.329 | — |
| chr1_16367111_T_G | chr1:16367111 | -0.185 | 0.010 | 0.259 | <0.001% |
| chr1_16367089_A_C | chr1:16367089 | -0.180 | 0.046 | -0.024 | — |
| chr1_16367134_T_A | chr1:16367134 | 0.178 | -0.170 | 0.024 | — |
| chr1_16367237_G_A | chr1:16367237 | -0.015 | 0.132 | 0.306 | 0.0013% |
| chr1_16367240_G_A | chr1:16367240 | 0.010 | 0.234 | 0.306 | — |
| chr1_16367245_A_G | chr1:16367245 | -0.055 | -0.145 | -0.306 | — |
| chr1_16367263_A_C | chr1:16367263 | 0.077 | 0.109 | 0.306 | — |
| chr1_16367264_G_A | chr1:16367264 | -0.136 | -0.013 | 0.306 | — |
| chr1_16367271_A_G | chr1:16367271 | -0.173 | -0.081 | -0.188 | <0.001% |
| chr1_16367311_A_G | chr1:16367311 | 0.040 | 0.030 | 0.306 | <0.001% |
| chr1_16367087_C_G | chr1:16367087 | -0.166 | -0.008 | -0.124 | — |
| chr1_16367088_A_G | chr1:16367088 | -0.166 | 0.015 | -0.024 | — |
| chr1_16367185_G_C | chr1:16367185 | -0.166 | 0.015 | -0.071 | — |
| chr1_16367220_G_C | chr1:16367220 | 0.072 | 0.190 | 0.294 | — |
| chr1_16367235_G_T | chr1:16367235 | 0.113 | 0.102 | 0.294 | — |
| chr1_16367237_G_T | chr1:16367237 | -0.003 | 0.109 | 0.294 | <0.001% |
| chr1_16367239_A_T | chr1:16367239 | -0.078 | -0.185 | -0.294 | — |
| chr1_16367354_C_G | chr1:16367354 | -0.020 | -0.079 | -0.294 | — |
| chr1_16367164_A_T | chr1:16367164 | 0.163 | 0.023 | 0.106 | — |
| chr1_16367220_G_A | chr1:16367220 | 0.035 | 0.211 | 0.282 | — |
| chr1_16367267_G_C | chr1:16367267 | 0.136 | 0.147 | 0.282 | — |
| chr1_16367312_A_T | chr1:16367312 | 0.020 | 0.046 | 0.282 | — |
| chr1_16367376_C_G | chr1:16367376 | -0.008 | -0.038 | -0.282 | — |
| chr1_16367134_T_G | chr1:16367134 | 0.158 | -0.137 | 0.047 | — |
| chr1_16367081_C_T | chr1:16367081 | 0.156 | -0.091 | 0.082 | — |
| chr1_16367113_G_T | chr1:16367113 | 0.156 | 0.239 | 0.247 | — |
| chr1_16367153_G_A | chr1:16367153 | 0.156 | 0.117 | 0.259 | — |
| chr1_16367080_C_A | chr1:16367080 | 0.153 | -0.051 | 0.018 | — |
| chr1_16367094_G_T | chr1:16367094 | -0.153 | -0.051 | -0.147 | — |
| chr1_16367210_G_C | chr1:16367210 | -0.123 | -0.373 | 0.271 | — |
| chr1_16367264_G_T | chr1:16367264 | -0.040 | -0.081 | 0.271 | — |
| chr1_16367272_G_A | chr1:16367272 | -0.146 | 0.091 | 0.271 | <0.001% |
| chr1_16367313_G_A | chr1:16367313 | 0.043 | 0.091 | 0.271 | — |
| chr1_16367315_A_C | chr1:16367315 | 0.073 | 0.028 | 0.271 | — |
| chr1_16367098_C_G | chr1:16367098 | -0.151 | -0.071 | -0.112 | — |
| chr1_16367110_C_T | chr1:16367110 | -0.151 | -0.071 | -0.065 | — |
| chr1_16367230_T_A | chr1:16367230 | 0.151 | 0.140 | 0.212 | — |
| chr1_16367079_C_A | chr1:16367079 | 0.150 | 0.165 | 0.141 | 0.0013% |
| chr1_16367092_T_C | chr1:16367092 | -0.150 | -0.013 | -0.047 | — |
| chr1_16367096_T_A | chr1:16367096 | -0.150 | -0.056 | -0.059 | — |
| chr1_16367097_G_A | chr1:16367097 | -0.150 | 0.000 | -0.176 | 0.024% |
| chr1_16367110_C_G | chr1:16367110 | -0.150 | -0.102 | -0.153 | — |
| chr1_16367121_G_C | chr1:16367121 | -0.150 | -0.084 | -0.094 | — |
| chr1_16367150_G_C | chr1:16367150 | 0.150 | -0.051 | 0.094 | — |
| chr1_16367214_A_C | chr1:16367214 | 0.146 | -0.117 | 0.235 | — |
| chr1_16367215_G_T | chr1:16367215 | 0.097 | 0.236 | 0.259 | — |
| chr1_16367218_G_C | chr1:16367218 | -0.017 | -0.223 | 0.259 | — |
| chr1_16367255_A_C | chr1:16367255 | 0.013 | -0.003 | 0.259 | — |
| chr1_16367265_A_C | chr1:16367265 | 0.070 | 0.063 | 0.259 | — |
| chr1_16367271_A_T | chr1:16367271 | -0.146 | -0.053 | 0.047 | — |
| chr1_16367361_G_C | chr1:16367361 | 0.028 | 0.043 | 0.259 | — |
| chr1_16367385_A_C | chr1:16367385 | -0.003 | 0.003 | 0.259 | — |
| chr1_16367214_A_G | chr1:16367214 | -0.040 | -0.444 | -0.153 | — |
| chr1_16367143_G_T | chr1:16367143 | 0.143 | -0.056 | -0.047 | — |
| chr1_16367166_T_G | chr1:16367166 | -0.143 | -0.096 | 0.024 | — |
| chr1_16367213_C_T | chr1:16367213 | -0.143 | -0.279 | -0.153 | — |
| chr1_16367254_T_G | chr1:16367254 | -0.143 | -0.114 | -0.224 | — |
| chr1_16367115_G_A | chr1:16367115 | 0.141 | 0.170 | 0.035 | — |
| chr1_16367080_C_T | chr1:16367080 | 0.140 | -0.043 | 0.012 | — |
| chr1_16367081_C_G | chr1:16367081 | 0.140 | -0.048 | 0.106 | — |
| chr1_16367083_C_G | chr1:16367083 | 0.140 | 0.023 | 0.112 | — |
| chr1_16367095_C_T | chr1:16367095 | -0.140 | 0.038 | -0.065 | — |
| chr1_16367167_A_C | chr1:16367167 | -0.140 | -0.025 | -0.024 | — |
| chr1_16367218_G_T | chr1:16367218 | 0.023 | -0.198 | 0.247 | — |
| chr1_16367276_G_A | chr1:16367276 | 0.106 | 0.122 | 0.247 | — |
| chr1_16367313_G_T | chr1:16367313 | 0.037 | 0.084 | 0.247 | — |
| chr1_16367087_C_A | chr1:16367087 | -0.136 | 0.043 | -0.212 | — |
| chr1_16367149_G_C | chr1:16367149 | 0.136 | -0.046 | 0.035 | — |
| chr1_16367154_G_C | chr1:16367154 | 0.136 | 0.023 | 0.035 | — |
| chr1_16367187_C_A | chr1:16367187 | 0.013 | 0.102 | 0.235 | — |
| chr1_16367190_C_T | chr1:16367190 | -0.133 | 0.107 | 0.071 | 0.0013% |
| chr1_16367259_T_A | chr1:16367259 | -0.133 | 0.025 | 0.118 | — |
| chr1_16367265_A_T | chr1:16367265 | 0.037 | 0.096 | 0.235 | — |
| chr1_16367230_T_C | chr1:16367230 | -0.131 | -0.010 | -0.024 | — |
| chr1_16367133_T_A | chr1:16367133 | 0.130 | -0.135 | 0.082 | — |
| chr1_16367150_G_A | chr1:16367150 | 0.126 | -0.063 | 0.118 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.