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SPATA2L
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SPATA2L
chr16:89,596,356..89,801,705, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr16_89700022_T_A | chr16:89700022 | 0.275 | 0.437 | 1.000 | — |
| chr16_89700070_T_A | chr16:89700070 | 0.148 | 0.640 | 1.000 | — |
| chr16_89700012_G_C | chr16:89700012 | 0.554 | 0.305 | 0.494 | — |
| chr16_89700019_G_A | chr16:89700019 | 0.549 | 0.426 | 0.412 | — |
| chr16_89700021_T_A | chr16:89700021 | 0.403 | 0.259 | 0.235 | — |
| chr16_89700022_T_G | chr16:89700022 | 0.113 | 0.287 | 0.659 | — |
| chr16_89700069_G_A | chr16:89700069 | 0.354 | 0.102 | 0.094 | — |
| chr16_89700071_C_A | chr16:89700071 | 0.329 | 0.135 | 0.035 | — |
| chr16_89700059_C_A | chr16:89700059 | 0.319 | 0.279 | 0.494 | — |
| chr16_89700070_T_G | chr16:89700070 | 0.314 | 0.188 | 0.318 | — |
| chr16_89700022_T_C | chr16:89700022 | 0.042 | 0.218 | 0.541 | — |
| chr16_89700026_T_C | chr16:89700026 | 0.116 | 0.195 | 0.541 | — |
| chr16_89699998_G_A | chr16:89699998 | 0.294 | 0.033 | 0.106 | — |
| chr16_89700047_A_C | chr16:89700047 | 0.290 | 0.345 | 0.294 | — |
| chr16_89686872_T_G | chr16:89686872 | -0.013 | 0.036 | -0.506 | — |
| chr16_89700026_T_G | chr16:89700026 | 0.063 | 0.140 | 0.482 | — |
| chr16_89700057_T_G | chr16:89700057 | 0.268 | 0.211 | 0.200 | — |
| chr16_89686865_A_G | chr16:89686865 | -0.035 | 0.010 | -0.471 | — |
| chr16_89686882_C_A | chr16:89686882 | -0.017 | 0.104 | 0.471 | — |
| chr16_89686892_G_A | chr16:89686892 | 0.037 | 0.056 | 0.471 | — |
| chr16_89700028_C_G | chr16:89700028 | 0.263 | 0.127 | 0.082 | — |
| chr16_89700038_G_A | chr16:89700038 | 0.263 | 0.335 | 0.224 | — |
| chr16_89700071_C_T | chr16:89700071 | 0.263 | 0.129 | 0.153 | — |
| chr16_89686646_C_T | chr16:89686646 | 0.093 | 0.042 | 0.459 | <0.001% |
| chr16_89700071_C_G | chr16:89700071 | 0.251 | 0.246 | 0.259 | — |
| chr16_89686696_G_A | chr16:89686696 | 0.166 | 0.041 | 0.435 | — |
| chr16_89686842_G_C | chr16:89686842 | 0.246 | 0.058 | 0.388 | — |
| chr16_89686893_C_A | chr16:89686893 | -0.136 | -0.089 | -0.424 | — |
| chr16_89700064_T_A | chr16:89700064 | -0.028 | 0.218 | 0.412 | — |
| chr16_89686682_G_A | chr16:89686682 | 0.145 | 0.119 | 0.400 | — |
| chr16_89686713_G_C | chr16:89686713 | -0.170 | -0.046 | -0.400 | — |
| chr16_89700031_T_A | chr16:89700031 | 0.178 | 0.081 | 0.400 | — |
| chr16_89700048_C_G | chr16:89700048 | -0.221 | -0.137 | -0.153 | 0.0026% |
| chr16_89700056_T_A | chr16:89700056 | 0.221 | 0.150 | 0.247 | — |
| chr16_89686695_G_A | chr16:89686695 | 0.067 | 0.038 | 0.388 | — |
| chr16_89686751_A_C | chr16:89686751 | 0.053 | 0.063 | 0.388 | — |
| chr16_89686801_C_G | chr16:89686801 | -0.073 | -0.145 | -0.388 | 0.0013% |
| chr16_89686759_C_G | chr16:89686759 | -0.020 | -0.030 | -0.376 | — |
| chr16_89686872_T_C | chr16:89686872 | 0.007 | 0.030 | -0.376 | — |
| chr16_89686876_G_A | chr16:89686876 | -0.003 | 0.025 | 0.376 | — |
| chr16_89686887_C_T | chr16:89686887 | 0.126 | 0.036 | 0.376 | — |
| chr16_89699991_G_C | chr16:89699991 | -0.100 | -0.056 | -0.376 | — |
| chr16_89686692_G_C | chr16:89686692 | 0.123 | 0.046 | 0.365 | 0.0029% |
| chr16_89686693_G_T | chr16:89686693 | 0.160 | 0.051 | 0.365 | — |
| chr16_89686647_G_A | chr16:89686647 | 0.017 | 0.079 | 0.353 | — |
| chr16_89686659_G_T | chr16:89686659 | 0.037 | 0.043 | 0.353 | — |
| chr16_89686692_G_A | chr16:89686692 | 0.106 | 0.081 | 0.353 | — |
| chr16_89686880_T_G | chr16:89686880 | -0.017 | -0.025 | -0.353 | — |
| chr16_89686884_G_A | chr16:89686884 | 0.043 | -0.036 | 0.353 | — |
| chr16_89700036_T_G | chr16:89700036 | -0.195 | -0.137 | -0.106 | — |
| chr16_89686693_G_A | chr16:89686693 | 0.163 | 0.071 | 0.341 | — |
| chr16_89700048_C_A | chr16:89700048 | -0.193 | -0.173 | -0.212 | — |
| chr16_89700072_T_C | chr16:89700072 | 0.193 | 0.175 | 0.200 | — |
| chr16_89700045_G_C | chr16:89700045 | -0.191 | -0.086 | -0.094 | — |
| chr16_89686647_G_T | chr16:89686647 | -0.038 | 0.084 | 0.329 | — |
| chr16_89686654_C_A | chr16:89686654 | 0.020 | -0.015 | 0.329 | — |
| chr16_89686796_G_A | chr16:89686796 | -0.050 | 0.023 | -0.329 | <0.001% |
| chr16_89686882_C_T | chr16:89686882 | -0.003 | 0.056 | 0.329 | 0.0013% |
| chr16_89700043_A_C | chr16:89700043 | -0.181 | -0.063 | -0.153 | — |
| chr16_89686647_G_C | chr16:89686647 | -0.047 | 0.023 | 0.318 | — |
| chr16_89686676_G_A | chr16:89686676 | 0.065 | 0.150 | 0.318 | — |
| chr16_89686695_G_T | chr16:89686695 | 0.070 | 0.020 | 0.318 | — |
| chr16_89700001_T_G | chr16:89700001 | -0.075 | -0.010 | 0.318 | — |
| chr16_89700057_T_A | chr16:89700057 | 0.175 | 0.142 | 0.106 | — |
| chr16_89686652_C_T | chr16:89686652 | 0.008 | 0.046 | 0.306 | — |
| chr16_89686693_G_C | chr16:89686693 | 0.173 | 0.003 | 0.247 | — |
| chr16_89686726_C_T | chr16:89686726 | -0.173 | -0.005 | -0.165 | — |
| chr16_89686867_C_G | chr16:89686867 | -0.033 | 0.038 | -0.306 | — |
| chr16_89686869_T_C | chr16:89686869 | -0.063 | 0.074 | -0.306 | — |
| chr16_89686869_T_G | chr16:89686869 | -0.072 | -0.043 | -0.306 | — |
| chr16_89686873_G_T | chr16:89686873 | -0.121 | 0.018 | -0.306 | — |
| chr16_89686874_T_G | chr16:89686874 | -0.030 | -0.010 | -0.306 | — |
| chr16_89686887_C_A | chr16:89686887 | 0.113 | 0.038 | 0.306 | — |
| chr16_89700017_G_T | chr16:89700017 | 0.083 | 0.109 | 0.306 | — |
| chr16_89700021_T_G | chr16:89700021 | 0.087 | 0.107 | 0.306 | — |
| chr16_89700062_T_C | chr16:89700062 | -0.170 | -0.079 | 0.035 | — |
| chr16_89700072_T_G | chr16:89700072 | 0.170 | 0.102 | 0.282 | — |
| chr16_89700070_T_C | chr16:89700070 | 0.168 | 0.107 | 0.271 | — |
| chr16_89686801_C_A | chr16:89686801 | -0.047 | 0.030 | -0.294 | — |
| chr16_89686860_T_G | chr16:89686860 | -0.030 | -0.053 | -0.294 | <0.001% |
| chr16_89700044_T_C | chr16:89700044 | -0.161 | -0.086 | -0.071 | — |
| chr16_89686679_T_G | chr16:89686679 | -0.043 | -0.053 | -0.282 | <0.001% |
| chr16_89686691_A_T | chr16:89686691 | 0.010 | 0.003 | 0.282 | — |
| chr16_89686765_G_T | chr16:89686765 | 0.002 | 0.038 | -0.282 | — |
| chr16_89686808_T_G | chr16:89686808 | -0.093 | -0.025 | -0.282 | — |
| chr16_89686872_T_A | chr16:89686872 | -0.017 | 0.030 | -0.282 | — |
| chr16_89686880_T_C | chr16:89686880 | -0.043 | -0.023 | -0.282 | — |
| chr16_89686893_C_G | chr16:89686893 | -0.070 | -0.023 | -0.282 | — |
| chr16_89700062_T_G | chr16:89700062 | -0.160 | -0.056 | -0.129 | — |
| chr16_89700040_C_G | chr16:89700040 | -0.158 | -0.104 | 0.094 | — |
| chr16_89686715_C_G | chr16:89686715 | -0.156 | 0.008 | -0.012 | 0.0026% |
| chr16_89700027_T_A | chr16:89700027 | 0.156 | 0.071 | 0.141 | — |
| chr16_89700019_G_C | chr16:89700019 | 0.155 | 0.084 | 0.153 | — |
| chr16_89700069_G_C | chr16:89700069 | 0.155 | 0.107 | 0.106 | — |
| chr16_89686646_C_A | chr16:89686646 | 0.035 | 0.029 | 0.271 | — |
| chr16_89686646_C_G | chr16:89686646 | 0.088 | 0.047 | 0.271 | — |
| chr16_89686648_C_A | chr16:89686648 | 0.050 | 0.079 | 0.271 | — |
| chr16_89686815_C_T | chr16:89686815 | 0.023 | 0.058 | 0.271 | <0.001% |
| chr16_89686844_A_G | chr16:89686844 | 0.010 | -0.043 | -0.271 | — |
| chr16_89699999_C_T | chr16:89699999 | -0.058 | -0.043 | -0.271 | — |
| chr16_89686645_G_C | chr16:89686645 | -0.151 | -0.044 | 0.129 | 0.045% |
| chr16_89700028_C_A | chr16:89700028 | 0.150 | 0.056 | -0.035 | — |
| chr16_89686645_G_T | chr16:89686645 | 0.052 | 0.010 | 0.259 | — |
| chr16_89686648_C_T | chr16:89686648 | 0.032 | 0.089 | 0.259 | — |
| chr16_89686730_A_C | chr16:89686730 | 0.053 | -0.018 | 0.259 | — |
| chr16_89686850_C_A | chr16:89686850 | -0.023 | 0.051 | 0.259 | 0.033% |
| chr16_89686869_T_A | chr16:89686869 | -0.106 | -0.063 | 0.259 | — |
| chr16_89686886_G_A | chr16:89686886 | 0.037 | 0.051 | 0.259 | — |
| chr16_89700004_A_G | chr16:89700004 | -0.018 | 0.033 | 0.259 | — |
| chr16_89700023_T_G | chr16:89700023 | 0.146 | 0.066 | 0.153 | — |
| chr16_89700055_G_T | chr16:89700055 | 0.143 | 0.124 | 0.153 | — |
| chr16_89686652_C_G | chr16:89686652 | 0.023 | -0.018 | 0.247 | — |
| chr16_89686654_C_T | chr16:89686654 | 0.032 | 0.033 | 0.247 | — |
| chr16_89686710_C_G | chr16:89686710 | -0.140 | 0.020 | -0.212 | — |
| chr16_89686711_A_G | chr16:89686711 | -0.140 | -0.025 | -0.082 | — |
| chr16_89686718_A_C | chr16:89686718 | -0.060 | -0.020 | -0.247 | — |
| chr16_89686721_C_A | chr16:89686721 | -0.050 | 0.008 | -0.247 | — |
| chr16_89686844_A_C | chr16:89686844 | 0.027 | -0.048 | -0.247 | — |
| chr16_89686865_A_C | chr16:89686865 | -0.007 | -0.015 | -0.247 | — |
| chr16_89699998_G_T | chr16:89699998 | -0.047 | -0.053 | -0.247 | — |
| chr16_89700007_A_G | chr16:89700007 | 0.020 | 0.036 | 0.247 | — |
| chr16_89700036_T_C | chr16:89700036 | -0.140 | -0.084 | 0.000 | — |
| chr16_89700031_T_C | chr16:89700031 | -0.136 | -0.038 | -0.024 | — |
| chr16_89700051_G_T | chr16:89700051 | 0.136 | 0.063 | 0.047 | — |
| chr16_89700015_C_G | chr16:89700015 | -0.135 | -0.051 | -0.176 | — |
| chr16_89700025_A_T | chr16:89700025 | 0.135 | 0.025 | 0.094 | — |
| chr16_89700054_T_G | chr16:89700054 | -0.135 | -0.038 | 0.059 | — |
| chr16_89686652_C_A | chr16:89686652 | -0.020 | -0.023 | 0.235 | — |
| chr16_89686653_G_A | chr16:89686653 | 0.025 | -0.056 | 0.235 | — |
| chr16_89686663_C_A | chr16:89686663 | 0.058 | 0.091 | 0.235 | — |
| chr16_89686673_T_G | chr16:89686673 | -0.025 | -0.081 | -0.235 | — |
| chr16_89686680_G_A | chr16:89686680 | 0.068 | 0.096 | 0.235 | <0.001% |
| chr16_89686814_C_G | chr16:89686814 | 0.013 | -0.013 | 0.235 | — |
| chr16_89686833_T_C | chr16:89686833 | -0.003 | -0.041 | -0.235 | — |
| chr16_89686854_T_A | chr16:89686854 | 0.000 | 0.010 | 0.235 | — |
| chr16_89686868_C_A | chr16:89686868 | -0.040 | 0.008 | -0.235 | — |
| chr16_89686881_G_T | chr16:89686881 | -0.020 | 0.048 | 0.235 | — |
| chr16_89686890_A_G | chr16:89686890 | -0.030 | -0.043 | -0.235 | — |
| chr16_89700000_C_A | chr16:89700000 | -0.020 | -0.061 | -0.235 | — |
| chr16_89700024_G_T | chr16:89700024 | -0.028 | -0.107 | -0.235 | — |
| chr16_89700044_T_A | chr16:89700044 | -0.133 | -0.109 | -0.153 | — |
| chr16_89700064_T_C | chr16:89700064 | 0.055 | 0.038 | 0.235 | — |
| chr16_89700023_T_C | chr16:89700023 | 0.131 | 0.028 | 0.176 | — |
| chr16_89700025_A_C | chr16:89700025 | 0.128 | 0.025 | 0.153 | — |
| chr16_89700058_C_G | chr16:89700058 | 0.128 | 0.099 | 0.165 | — |
| chr16_89686804_G_A | chr16:89686804 | 0.017 | 0.020 | 0.224 | — |
| chr16_89686838_A_G | chr16:89686838 | -0.020 | -0.038 | -0.224 | 1.84% |
| chr16_89700000_C_T | chr16:89700000 | -0.080 | -0.023 | -0.224 | — |
| chr16_89700006_C_A | chr16:89700006 | -0.057 | -0.043 | -0.224 | — |
| chr16_89700017_G_C | chr16:89700017 | 0.000 | -0.008 | 0.224 | — |
| chr16_89700024_G_C | chr16:89700024 | -0.058 | -0.135 | -0.224 | — |
| chr16_89700053_C_A | chr16:89700053 | 0.126 | 0.020 | 0.153 | — |
| chr16_89686694_C_G | chr16:89686694 | -0.123 | 0.081 | -0.141 | <0.001% |
| chr16_89686711_A_T | chr16:89686711 | -0.123 | 0.018 | -0.141 | — |
| chr16_89700054_T_C | chr16:89700054 | -0.121 | -0.033 | 0.082 | — |
| chr16_89686651_G_T | chr16:89686651 | -0.120 | 0.003 | 0.129 | — |
| chr16_89686695_G_C | chr16:89686695 | 0.047 | -0.018 | 0.212 | — |
| chr16_89686714_G_A | chr16:89686714 | -0.073 | 0.107 | 0.212 | 0.012% |
| chr16_89686805_G_T | chr16:89686805 | 0.033 | -0.013 | 0.212 | — |
| chr16_89686816_G_T | chr16:89686816 | 0.043 | 0.038 | 0.212 | — |
| chr16_89686833_T_G | chr16:89686833 | 0.000 | -0.028 | -0.212 | — |
| chr16_89686863_G_A | chr16:89686863 | 0.000 | 0.018 | 0.212 | — |
| chr16_89686878_G_C | chr16:89686878 | 0.007 | 0.036 | 0.212 | <0.001% |
| chr16_89686878_G_T | chr16:89686878 | -0.013 | 0.043 | 0.212 | — |
| chr16_89686884_G_T | chr16:89686884 | 0.067 | 0.038 | 0.212 | — |
| chr16_89686885_C_T | chr16:89686885 | 0.027 | 0.025 | 0.212 | — |
| chr16_89686886_G_T | chr16:89686886 | 0.027 | 0.041 | 0.212 | — |
| chr16_89700029_A_T | chr16:89700029 | -0.098 | -0.066 | -0.212 | — |
| chr16_89700063_G_C | chr16:89700063 | -0.120 | -0.018 | 0.047 | — |
| chr16_89686712_T_G | chr16:89686712 | -0.116 | 0.003 | -0.188 | — |
| chr16_89700065_C_T | chr16:89700065 | 0.116 | 0.066 | 0.012 | <0.001% |
| chr16_89686723_G_A | chr16:89686723 | -0.115 | 0.041 | 0.047 | 0.0013% |
| chr16_89700072_T_A | chr16:89700072 | 0.115 | 0.084 | 0.165 | — |
| chr16_89686651_G_A | chr16:89686651 | -0.058 | 0.046 | 0.200 | — |
| chr16_89686665_T_C | chr16:89686665 | -0.042 | -0.048 | -0.200 | — |
| chr16_89686671_T_G | chr16:89686671 | -0.062 | -0.058 | -0.200 | — |
| chr16_89686712_T_A | chr16:89686712 | -0.113 | 0.046 | -0.129 | <0.001% |
| chr16_89686820_A_G | chr16:89686820 | 0.010 | -0.033 | -0.200 | — |
| chr16_89686825_T_C | chr16:89686825 | 0.017 | -0.056 | -0.200 | — |
| chr16_89686838_A_C | chr16:89686838 | -0.017 | -0.063 | -0.200 | — |
| chr16_89686846_T_G | chr16:89686846 | 0.030 | -0.041 | -0.200 | — |
| chr16_89686871_G_C | chr16:89686871 | -0.013 | 0.071 | -0.200 | — |
| chr16_89700004_A_C | chr16:89700004 | -0.040 | 0.005 | 0.200 | — |
| chr16_89700032_C_T | chr16:89700032 | -0.087 | -0.066 | -0.200 | 0.0013% |
| chr16_89700039_C_G | chr16:89700039 | -0.098 | -0.063 | -0.200 | — |
| chr16_89686651_G_C | chr16:89686651 | -0.111 | -0.030 | 0.082 | — |
| chr16_89700067_C_A | chr16:89700067 | -0.111 | -0.081 | -0.176 | — |
| chr16_89686763_A_C | chr16:89686763 | 0.110 | -0.008 | 0.024 | — |
| chr16_89686764_G_C | chr16:89686764 | 0.110 | -0.003 | 0.059 | — |
| chr16_89686764_G_T | chr16:89686764 | 0.110 | -0.015 | 0.082 | — |
| chr16_89700045_G_A | chr16:89700045 | -0.110 | -0.109 | -0.094 | — |
| chr16_89700027_T_C | chr16:89700027 | 0.108 | 0.076 | 0.141 | — |
| chr16_89700058_C_A | chr16:89700058 | 0.108 | 0.079 | 0.059 | — |
| chr16_89700065_C_G | chr16:89700065 | 0.108 | 0.048 | 0.035 | — |
| chr16_89686662_C_A | chr16:89686662 | 0.022 | 0.081 | 0.188 | — |
| chr16_89686664_G_T | chr16:89686664 | -0.033 | 0.094 | 0.188 | — |
| chr16_89686668_G_A | chr16:89686668 | 0.040 | 0.043 | 0.188 | — |
| chr16_89686678_C_A | chr16:89686678 | 0.025 | 0.036 | 0.188 | — |
| chr16_89686691_A_C | chr16:89686691 | 0.033 | -0.041 | 0.188 | — |
| chr16_89686712_T_C | chr16:89686712 | -0.106 | -0.008 | -0.012 | 0.0013% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.