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SPEN
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SPEN
chr1:15,747,706..16,040,456, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_15759117_G_A | chr1:15759117 | 0.101 | 0.272 | 1.000 | — |
| chr1_15759168_C_G | chr1:15759168 | 0.160 | 0.170 | 1.000 | — |
| chr1_15759126_C_G | chr1:15759126 | 0.248 | 0.282 | 0.929 | — |
| chr1_15759123_G_A | chr1:15759123 | 0.076 | 0.201 | 0.912 | <0.001% |
| chr1_15759102_C_G | chr1:15759102 | 0.226 | 0.221 | 0.788 | <0.001% |
| chr1_15759211_C_T | chr1:15759211 | 0.226 | 0.109 | 0.776 | — |
| chr1_15759180_A_C | chr1:15759180 | 0.111 | 0.212 | 0.753 | <0.001% |
| chr1_15759172_A_G | chr1:15759172 | -0.134 | -0.128 | -0.706 | — |
| chr1_15759206_G_C | chr1:15759206 | 0.376 | 0.192 | 0.694 | — |
| chr1_15759154_T_C | chr1:15759154 | -0.121 | -0.106 | -0.641 | — |
| chr1_15759191_A_T | chr1:15759191 | 0.163 | 0.173 | 0.635 | — |
| chr1_15759095_G_A | chr1:15759095 | 0.159 | 0.096 | 0.629 | — |
| chr1_15759203_G_A | chr1:15759203 | -0.136 | -0.135 | -0.624 | — |
| chr1_15759150_A_C | chr1:15759150 | -0.055 | -0.098 | -0.582 | — |
| chr1_15759177_C_A | chr1:15759177 | 0.231 | 0.244 | 0.565 | — |
| chr1_15759066_G_T | chr1:15759066 | 0.070 | 0.097 | 0.535 | — |
| chr1_15759150_A_G | chr1:15759150 | -0.072 | -0.102 | -0.535 | — |
| chr1_15759221_C_T | chr1:15759221 | 0.082 | 0.029 | 0.506 | — |
| chr1_15758993_T_G | chr1:15758993 | -0.048 | -0.029 | -0.500 | — |
| chr1_15759148_G_A | chr1:15759148 | -0.047 | -0.056 | -0.488 | — |
| chr1_15759149_G_C | chr1:15759149 | -0.050 | -0.074 | -0.488 | — |
| chr1_15759118_A_C | chr1:15759118 | -0.005 | -0.076 | -0.476 | — |
| chr1_15759153_C_T | chr1:15759153 | 0.022 | 0.106 | 0.476 | — |
| chr1_15759151_A_T | chr1:15759151 | -0.055 | -0.104 | -0.471 | — |
| chr1_15759171_G_A | chr1:15759171 | 0.108 | 0.150 | 0.471 | — |
| chr1_15759221_C_A | chr1:15759221 | 0.064 | 0.042 | 0.459 | — |
| chr1_15759221_C_G | chr1:15759221 | 0.062 | -0.020 | 0.459 | — |
| chr1_15758980_A_C | chr1:15758980 | 0.023 | -0.067 | -0.454 | — |
| chr1_15758957_G_A | chr1:15758957 | 0.017 | 0.070 | 0.447 | — |
| chr1_15759195_A_C | chr1:15759195 | 0.050 | 0.146 | 0.447 | — |
| chr1_15758959_C_T | chr1:15758959 | 0.039 | 0.070 | 0.440 | — |
| chr1_15759160_A_C | chr1:15759160 | 0.047 | 0.080 | 0.435 | — |
| chr1_15758945_G_A | chr1:15758945 | 0.032 | 0.038 | 0.431 | — |
| chr1_15758960_C_T | chr1:15758960 | 0.032 | 0.077 | 0.425 | — |
| chr1_15759148_G_C | chr1:15759148 | -0.030 | -0.053 | -0.418 | 0.0013% |
| chr1_15759148_G_T | chr1:15759148 | -0.037 | -0.038 | -0.406 | — |
| chr1_15759222_C_T | chr1:15759222 | 0.068 | 0.067 | 0.400 | — |
| chr1_15758947_C_A | chr1:15758947 | -0.002 | 0.040 | 0.397 | 0.0013% |
| chr1_15759144_G_C | chr1:15759144 | -0.045 | -0.041 | -0.394 | — |
| chr1_15759174_T_C | chr1:15759174 | -0.070 | -0.091 | -0.388 | — |
| chr1_15759223_C_T | chr1:15759223 | 0.067 | 0.038 | 0.388 | — |
| chr1_15759155_C_T | chr1:15759155 | 0.063 | 0.086 | 0.382 | <0.001% |
| chr1_15759151_A_C | chr1:15759151 | -0.023 | -0.055 | -0.376 | — |
| chr1_15759151_A_G | chr1:15759151 | -0.020 | -0.088 | -0.376 | — |
| chr1_15759174_T_A | chr1:15759174 | -0.082 | -0.102 | -0.376 | — |
| chr1_15758959_C_A | chr1:15758959 | 0.030 | 0.059 | 0.371 | — |
| chr1_15759102_C_A | chr1:15759102 | 0.115 | 0.130 | 0.371 | — |
| chr1_15759150_A_T | chr1:15759150 | -0.047 | -0.070 | -0.371 | — |
| chr1_15758958_A_G | chr1:15758958 | 0.011 | -0.032 | -0.369 | — |
| chr1_15759002_C_G | chr1:15759002 | -0.048 | -0.060 | -0.369 | — |
| chr1_15759202_G_A | chr1:15759202 | 0.136 | 0.077 | 0.365 | — |
| chr1_15759222_C_A | chr1:15759222 | 0.043 | 0.011 | 0.365 | — |
| chr1_15759076_A_G | chr1:15759076 | -0.034 | -0.059 | -0.353 | — |
| chr1_15758949_C_T | chr1:15758949 | 0.008 | 0.042 | 0.349 | — |
| chr1_15758951_A_G | chr1:15758951 | -0.005 | -0.034 | -0.349 | — |
| chr1_15759155_C_G | chr1:15759155 | 0.093 | 0.049 | 0.347 | — |
| chr1_15758987_T_G | chr1:15758987 | -0.003 | -0.030 | -0.346 | — |
| chr1_15758951_A_C | chr1:15758951 | -0.005 | -0.028 | -0.341 | — |
| chr1_15759120_C_G | chr1:15759120 | 0.062 | 0.103 | 0.341 | — |
| chr1_15759213_G_C | chr1:15759213 | -0.091 | -0.072 | -0.341 | — |
| chr1_15759225_G_A | chr1:15759225 | -0.088 | -0.065 | -0.341 | <0.001% |
| chr1_15759234_C_A | chr1:15759234 | 0.047 | 0.030 | 0.341 | — |
| chr1_15758953_C_T | chr1:15758953 | 0.006 | 0.039 | 0.335 | <0.001% |
| chr1_15759106_T_C | chr1:15759106 | -0.019 | -0.064 | -0.335 | — |
| chr1_15759147_C_G | chr1:15759147 | -0.076 | -0.053 | -0.335 | — |
| chr1_15758967_G_A | chr1:15758967 | -0.004 | 0.036 | 0.331 | — |
| chr1_15759212_A_G | chr1:15759212 | -0.037 | -0.055 | -0.329 | — |
| chr1_15758958_A_C | chr1:15758958 | 0.002 | -0.025 | -0.325 | — |
| chr1_15758950_C_T | chr1:15758950 | 0.008 | 0.032 | 0.322 | — |
| chr1_15758963_C_T | chr1:15758963 | 0.016 | 0.043 | 0.322 | — |
| chr1_15758963_C_A | chr1:15758963 | 0.004 | 0.038 | 0.319 | — |
| chr1_15759064_A_G | chr1:15759064 | -0.037 | -0.049 | -0.318 | — |
| chr1_15759097_A_C | chr1:15759097 | 0.002 | -0.043 | -0.318 | — |
| chr1_15759147_C_T | chr1:15759147 | -0.030 | -0.033 | -0.318 | <0.001% |
| chr1_15759149_G_T | chr1:15759149 | -0.033 | -0.048 | -0.318 | — |
| chr1_15759156_C_A | chr1:15759156 | 0.068 | 0.069 | 0.318 | — |
| chr1_15759164_A_T | chr1:15759164 | 0.007 | 0.033 | 0.318 | — |
| chr1_15759204_C_G | chr1:15759204 | -0.077 | -0.074 | -0.318 | — |
| chr1_15759214_C_G | chr1:15759214 | -0.053 | -0.058 | -0.318 | — |
| chr1_15759000_T_G | chr1:15759000 | -0.043 | -0.032 | -0.315 | — |
| chr1_15759057_A_C | chr1:15759057 | -0.035 | -0.042 | -0.315 | — |
| chr1_15758973_C_T | chr1:15758973 | 0.005 | 0.037 | 0.313 | 0.031% |
| chr1_15758998_G_A | chr1:15758998 | 0.017 | 0.034 | 0.312 | — |
| chr1_15759024_C_A | chr1:15759024 | -0.006 | 0.009 | 0.312 | — |
| chr1_15759146_G_T | chr1:15759146 | -0.050 | -0.007 | -0.312 | — |
| chr1_15758946_T_C | chr1:15758946 | -0.009 | -0.037 | -0.309 | — |
| chr1_15758948_G_T | chr1:15758948 | -0.002 | 0.048 | 0.309 | <0.001% |
| chr1_15759049_A_C | chr1:15759049 | -0.028 | -0.045 | -0.309 | — |
| chr1_15758954_C_A | chr1:15758954 | 0.014 | 0.031 | 0.307 | — |
| chr1_15758960_C_A | chr1:15758960 | 0.023 | 0.053 | 0.307 | — |
| chr1_15759091_C_T | chr1:15759091 | 0.055 | 0.064 | 0.306 | — |
| chr1_15759146_G_C | chr1:15759146 | 0.022 | 0.063 | 0.306 | — |
| chr1_15759188_C_G | chr1:15759188 | -0.071 | -0.063 | -0.306 | — |
| chr1_15759220_C_T | chr1:15759220 | 0.031 | 0.013 | 0.306 | — |
| chr1_15758966_C_A | chr1:15758966 | -0.008 | 0.049 | 0.303 | — |
| chr1_15758971_C_A | chr1:15758971 | -0.003 | 0.040 | 0.301 | — |
| chr1_15759189_G_A | chr1:15759189 | -0.053 | -0.049 | -0.300 | — |
| chr1_15758952_G_T | chr1:15758952 | -0.007 | 0.029 | 0.297 | — |
| chr1_15758971_C_T | chr1:15758971 | -0.001 | 0.036 | 0.297 | — |
| chr1_15758949_C_A | chr1:15758949 | 0.000 | 0.037 | 0.294 | — |
| chr1_15759068_C_G | chr1:15759068 | -0.052 | -0.036 | -0.294 | — |
| chr1_15759093_G_T | chr1:15759093 | -0.086 | -0.046 | -0.294 | — |
| chr1_15758962_C_T | chr1:15758962 | 0.000 | 0.020 | 0.293 | — |
| chr1_15758993_T_C | chr1:15758993 | 0.001 | -0.035 | -0.290 | — |
| chr1_15758947_C_T | chr1:15758947 | -0.003 | 0.027 | 0.288 | — |
| chr1_15759134_C_G | chr1:15759134 | 0.038 | 0.043 | 0.288 | — |
| chr1_15758955_G_T | chr1:15758955 | 0.008 | 0.032 | 0.284 | — |
| chr1_15758977_T_C | chr1:15758977 | 0.002 | -0.029 | -0.284 | — |
| chr1_15759106_T_G | chr1:15759106 | -0.011 | -0.071 | -0.282 | — |
| chr1_15759132_A_T | chr1:15759132 | -0.065 | -0.049 | -0.282 | — |
| chr1_15759220_C_A | chr1:15759220 | 0.057 | 0.032 | 0.282 | — |
| chr1_15759222_C_G | chr1:15759222 | 0.075 | -0.003 | 0.282 | — |
| chr1_15758967_G_T | chr1:15758967 | 0.002 | 0.032 | 0.281 | <0.001% |
| chr1_15758956_G_A | chr1:15758956 | 0.002 | 0.030 | 0.279 | — |
| chr1_15758968_C_A | chr1:15758968 | -0.011 | 0.031 | 0.279 | — |
| chr1_15758948_G_A | chr1:15758948 | -0.004 | 0.035 | 0.278 | — |
| chr1_15758955_G_A | chr1:15758955 | 0.002 | 0.028 | 0.276 | — |
| chr1_15758988_G_A | chr1:15758988 | 0.011 | 0.024 | 0.276 | — |
| chr1_15759103_G_A | chr1:15759103 | 0.043 | 0.076 | 0.276 | — |
| chr1_15759124_A_C | chr1:15759124 | 0.003 | -0.047 | -0.276 | — |
| chr1_15759134_C_A | chr1:15759134 | 0.007 | 0.049 | 0.276 | 0.0046% |
| chr1_15759145_G_C | chr1:15759145 | -0.016 | -0.023 | -0.276 | — |
| chr1_15758962_C_A | chr1:15758962 | 0.023 | 0.035 | 0.275 | — |
| chr1_15758969_G_A | chr1:15758969 | 0.026 | 0.033 | 0.272 | — |
| chr1_15758969_G_T | chr1:15758969 | 0.010 | 0.037 | 0.272 | — |
| chr1_15758953_C_A | chr1:15758953 | -0.017 | 0.030 | 0.271 | — |
| chr1_15758961_C_T | chr1:15758961 | 0.014 | 0.048 | 0.271 | — |
| chr1_15759097_A_G | chr1:15759097 | -0.037 | -0.030 | -0.271 | — |
| chr1_15759229_C_A | chr1:15759229 | 0.004 | 0.058 | 0.271 | — |
| chr1_15758975_C_A | chr1:15758975 | 0.004 | 0.026 | 0.266 | — |
| chr1_15758945_G_T | chr1:15758945 | 0.002 | 0.026 | 0.265 | — |
| chr1_15759143_A_G | chr1:15759143 | -0.028 | -0.052 | -0.265 | — |
| chr1_15758978_G_A | chr1:15758978 | 0.020 | 0.013 | 0.262 | — |
| chr1_15758978_G_C | chr1:15758978 | -0.052 | -0.030 | -0.260 | <0.001% |
| chr1_15759129_G_A | chr1:15759129 | 0.037 | 0.045 | 0.259 | — |
| chr1_15759130_G_T | chr1:15759130 | 0.037 | 0.104 | 0.259 | <0.001% |
| chr1_15759157_C_A | chr1:15759157 | 0.043 | 0.049 | 0.259 | — |
| chr1_15759157_C_T | chr1:15759157 | 0.060 | 0.069 | 0.259 | — |
| chr1_15759175_C_T | chr1:15759175 | 0.003 | 0.056 | 0.259 | 0.0099% |
| chr1_15759178_G_T | chr1:15759178 | 0.042 | 0.055 | 0.259 | — |
| chr1_15759187_T_C | chr1:15759187 | -0.063 | -0.034 | -0.259 | — |
| chr1_15759223_C_A | chr1:15759223 | 0.028 | 0.013 | 0.259 | — |
| chr1_15758968_C_T | chr1:15758968 | -0.010 | 0.030 | 0.257 | — |
| chr1_15758954_C_T | chr1:15758954 | 0.006 | 0.032 | 0.254 | <0.001% |
| chr1_15758980_A_G | chr1:15758980 | -0.012 | 0.003 | -0.254 | — |
| chr1_15759005_T_C | chr1:15759005 | -0.014 | -0.039 | -0.251 | — |
| chr1_15758982_G_A | chr1:15758982 | 0.012 | 0.030 | 0.250 | — |
| chr1_15759005_T_G | chr1:15759005 | -0.027 | -0.030 | -0.250 | — |
| chr1_15758957_G_T | chr1:15758957 | 0.019 | 0.042 | 0.247 | — |
| chr1_15759092_G_A | chr1:15759092 | 0.014 | 0.034 | 0.247 | — |
| chr1_15759146_G_A | chr1:15759146 | -0.042 | -0.004 | -0.247 | — |
| chr1_15759165_A_T | chr1:15759165 | 0.032 | 0.053 | 0.247 | — |
| chr1_15759206_G_A | chr1:15759206 | 0.118 | 0.071 | 0.247 | — |
| chr1_15758966_C_T | chr1:15758966 | 0.002 | 0.044 | 0.241 | — |
| chr1_15759104_A_C | chr1:15759104 | -0.012 | -0.055 | -0.241 | — |
| chr1_15759110_A_G | chr1:15759110 | 0.010 | -0.022 | -0.241 | — |
| chr1_15759120_C_A | chr1:15759120 | 0.022 | 0.043 | 0.241 | — |
| chr1_15759133_C_T | chr1:15759133 | 0.038 | 0.044 | 0.241 | — |
| chr1_15759149_G_A | chr1:15759149 | -0.052 | -0.027 | -0.241 | — |
| chr1_15758984_G_T | chr1:15758984 | -0.005 | 0.031 | 0.238 | <0.001% |
| chr1_15759092_G_T | chr1:15759092 | 0.000 | 0.003 | 0.235 | — |
| chr1_15759172_A_C | chr1:15759172 | -0.023 | -0.047 | -0.235 | — |
| chr1_15759230_C_A | chr1:15759230 | 0.012 | 0.037 | 0.235 | — |
| chr1_15758946_T_G | chr1:15758946 | -0.003 | -0.033 | -0.234 | — |
| chr1_15758997_G_A | chr1:15758997 | 0.029 | 0.017 | 0.234 | — |
| chr1_15758961_C_A | chr1:15758961 | 0.007 | 0.019 | 0.232 | — |
| chr1_15759000_T_C | chr1:15759000 | -0.011 | -0.033 | -0.232 | — |
| chr1_15758984_G_A | chr1:15758984 | -0.002 | 0.037 | 0.229 | — |
| chr1_15759103_G_T | chr1:15759103 | 0.017 | 0.011 | 0.229 | — |
| chr1_15759107_C_G | chr1:15759107 | 0.085 | 0.064 | 0.229 | — |
| chr1_15759003_G_T | chr1:15759003 | 0.020 | 0.038 | 0.226 | — |
| chr1_15759013_C_A | chr1:15759013 | 0.063 | 0.074 | 0.226 | — |
| chr1_15758972_G_T | chr1:15758972 | 0.004 | 0.035 | 0.225 | — |
| chr1_15759088_G_T | chr1:15759088 | -0.014 | -0.028 | -0.224 | — |
| chr1_15759104_A_G | chr1:15759104 | -0.024 | -0.041 | -0.224 | — |
| chr1_15759108_C_A | chr1:15759108 | 0.000 | 0.041 | 0.224 | — |
| chr1_15759167_G_C | chr1:15759167 | -0.023 | -0.042 | -0.224 | — |
| chr1_15759174_T_G | chr1:15759174 | -0.018 | -0.069 | -0.224 | — |
| chr1_15759194_A_C | chr1:15759194 | 0.002 | 0.066 | 0.224 | — |
| chr1_15759220_C_G | chr1:15759220 | 0.039 | 0.009 | 0.224 | — |
| chr1_15759228_G_T | chr1:15759228 | 0.002 | 0.033 | 0.224 | — |
| chr1_15759231_G_C | chr1:15759231 | -0.105 | -0.032 | -0.224 | — |
| chr1_15759231_G_T | chr1:15759231 | -0.012 | 0.025 | 0.224 | <0.001% |
| chr1_15758981_G_T | chr1:15758981 | 0.018 | 0.026 | 0.221 | — |
| chr1_15758956_G_T | chr1:15758956 | 0.014 | 0.038 | 0.219 | — |
| chr1_15759006_C_A | chr1:15759006 | 0.124 | 0.055 | 0.012 | — |
| chr1_15759155_C_A | chr1:15759155 | 0.042 | 0.038 | 0.218 | — |
| chr1_15759159_C_T | chr1:15759159 | 0.025 | 0.052 | 0.218 | — |
| chr1_15758972_G_A | chr1:15758972 | 0.008 | 0.032 | 0.216 | <0.001% |
| chr1_15758989_C_T | chr1:15758989 | 0.002 | 0.035 | 0.215 | — |
| chr1_15758982_G_T | chr1:15758982 | -0.003 | 0.026 | 0.212 | 0.0079% |
| chr1_15759116_G_C | chr1:15759116 | -0.001 | -0.030 | -0.212 | — |
| chr1_15759134_C_T | chr1:15759134 | 0.018 | 0.041 | 0.212 | <0.001% |
| chr1_15759208_G_A | chr1:15759208 | 0.057 | 0.048 | 0.212 | — |
| chr1_15759224_G_C | chr1:15759224 | -0.055 | -0.053 | -0.212 | — |
| chr1_15758989_C_A | chr1:15758989 | -0.004 | 0.030 | 0.209 | — |
| chr1_15758996_G_A | chr1:15758996 | 0.034 | 0.003 | 0.206 | — |
| chr1_15759093_G_C | chr1:15759093 | 0.027 | 0.029 | 0.206 | — |
| chr1_15758977_T_G | chr1:15758977 | 0.012 | -0.021 | -0.204 | — |
| chr1_15758981_G_A | chr1:15758981 | 0.013 | 0.027 | 0.204 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.