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SPEN
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SPEN
chr1:15,747,706..16,040,456, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr1_15759206_G_C | chr1:15759206 | 14,464 | 2,416 | 15,104 | — |
| chr1_15759126_C_G | chr1:15759126 | 9,536 | 3,560 | 20,224 | — |
| chr1_15759177_C_A | chr1:15759177 | 8,896 | 3,080 | 12,288 | — |
| chr1_15759102_C_G | chr1:15759102 | 8,704 | 2,784 | 17,152 | 6.6e-6 |
| chr1_15759211_C_T | chr1:15759211 | 8,704 | 1,376 | 16,896 | — |
| chr1_15759191_A_T | chr1:15759191 | 6,272 | 2,176 | 13,824 | — |
| chr1_15759168_C_G | chr1:15759168 | 6,144 | 2,144 | 22,784 | — |
| chr1_15759095_G_A | chr1:15759095 | 6,112 | 1,208 | 13,696 | — |
| chr1_15759202_G_A | chr1:15759202 | 5,248 | 976 | 7,936 | — |
| chr1_15759203_G_A | chr1:15759203 | -5,216 | -1,696 | -13,568 | — |
| chr1_15759172_A_G | chr1:15759172 | -5,152 | -1,616 | -15,360 | — |
| chr1_15759006_C_A | chr1:15759006 | 4,768 | 688 | 256 | — |
| chr1_15759154_T_C | chr1:15759154 | -4,672 | -1,336 | -13,952 | — |
| chr1_15759206_G_A | chr1:15759206 | 4,544 | 896 | 5,376 | — |
| chr1_15759102_C_A | chr1:15759102 | 4,416 | 1,640 | 8,064 | — |
| chr1_15759180_A_C | chr1:15759180 | 4,288 | 2,672 | 16,384 | 6.6e-6 |
| chr1_15759171_G_A | chr1:15759171 | 4,160 | 1,896 | 10,240 | — |
| chr1_15759231_G_C | chr1:15759231 | -4,032 | -400 | -4,864 | — |
| chr1_15759117_G_A | chr1:15759117 | 3,904 | 3,432 | 25,984 | — |
| chr1_15759155_C_G | chr1:15759155 | 3,584 | 624 | 7,552 | — |
| chr1_15759213_G_C | chr1:15759213 | -3,488 | -912 | -7,424 | — |
| chr1_15759225_G_A | chr1:15759225 | -3,392 | -816 | -7,424 | 6.6e-6 |
| chr1_15759093_G_T | chr1:15759093 | -3,296 | -580 | -6,400 | — |
| chr1_15759107_C_G | chr1:15759107 | 3,264 | 804 | 4,992 | — |
| chr1_15759221_C_T | chr1:15759221 | 3,168 | 368 | 11,008 | — |
| chr1_15759174_T_A | chr1:15759174 | -3,136 | -1,288 | -8,192 | — |
| chr1_15759204_C_G | chr1:15759204 | -2,976 | -928 | -6,912 | — |
| chr1_15759123_G_A | chr1:15759123 | 2,912 | 2,528 | 19,840 | 6.6e-6 |
| chr1_15759147_C_G | chr1:15759147 | -2,912 | -664 | -7,296 | — |
| chr1_15759222_C_G | chr1:15759222 | 2,880 | -32 | 6,144 | — |
| chr1_15759150_A_G | chr1:15759150 | -2,752 | -1,280 | -11,648 | — |
| chr1_15759188_C_G | chr1:15759188 | -2,720 | -800 | -6,656 | — |
| chr1_15759066_G_T | chr1:15759066 | 2,688 | 1,220 | 11,648 | — |
| chr1_15759174_T_C | chr1:15759174 | -2,688 | -1,144 | -8,448 | — |
| chr1_15759222_C_T | chr1:15759222 | 2,624 | 848 | 8,704 | — |
| chr1_15759156_C_A | chr1:15759156 | 2,624 | 864 | 6,912 | — |
| chr1_15759223_C_T | chr1:15759223 | 2,560 | 480 | 8,448 | — |
| chr1_15759132_A_T | chr1:15759132 | -2,496 | -624 | -6,144 | — |
| chr1_15759221_C_A | chr1:15759221 | 2,464 | 528 | 9,984 | — |
| chr1_15759155_C_T | chr1:15759155 | 2,432 | 1,080 | 8,320 | 6.6e-6 |
| chr1_15759187_T_C | chr1:15759187 | -2,432 | -432 | -5,632 | — |
| chr1_15759013_C_A | chr1:15759013 | 2,432 | 934 | 4,928 | — |
| chr1_15759221_C_G | chr1:15759221 | 2,400 | -256 | 9,984 | — |
| chr1_15759120_C_G | chr1:15759120 | 2,368 | 1,304 | 7,424 | — |
| chr1_15759157_C_T | chr1:15759157 | 2,304 | 864 | 5,632 | — |
| chr1_15759220_C_A | chr1:15759220 | 2,208 | 400 | 6,144 | — |
| chr1_15759208_G_A | chr1:15759208 | 2,176 | 608 | 4,608 | — |
| chr1_15759150_A_C | chr1:15759150 | -2,112 | -1,232 | -12,672 | — |
| chr1_15759151_A_T | chr1:15759151 | -2,112 | -1,312 | -10,240 | — |
| chr1_15759091_C_T | chr1:15759091 | 2,112 | 808 | 6,656 | — |
| chr1_15759224_G_C | chr1:15759224 | -2,112 | -672 | -4,608 | — |
| chr1_15759214_C_G | chr1:15759214 | -2,048 | -736 | -6,912 | — |
| chr1_15759189_G_A | chr1:15759189 | -2,048 | -624 | -6,528 | — |
| chr1_15759068_C_G | chr1:15759068 | -2,016 | -460 | -6,400 | — |
| chr1_15758978_G_C | chr1:15758978 | -2,016 | -380 | -5,664 | 6.6e-6 |
| chr1_15759149_G_A | chr1:15759149 | -1,984 | -344 | -5,248 | — |
| chr1_15759149_G_C | chr1:15759149 | -1,920 | -936 | -10,624 | — |
| chr1_15759195_A_C | chr1:15759195 | 1,920 | 1,840 | 9,728 | — |
| chr1_15759146_G_T | chr1:15759146 | -1,920 | -88 | -6,784 | — |
| chr1_15758993_T_G | chr1:15758993 | -1,856 | -368 | -10,880 | — |
| chr1_15759002_C_G | chr1:15759002 | -1,856 | -758 | -8,032 | — |
| chr1_15759148_G_A | chr1:15759148 | -1,792 | -712 | -10,624 | — |
| chr1_15759160_A_C | chr1:15759160 | 1,792 | 1,008 | 9,472 | — |
| chr1_15759150_A_T | chr1:15759150 | -1,792 | -888 | -8,064 | — |
| chr1_15759234_C_A | chr1:15759234 | 1,792 | 384 | 7,424 | — |
| chr1_15759144_G_C | chr1:15759144 | -1,728 | -512 | -8,576 | — |
| chr1_15759222_C_A | chr1:15759222 | 1,664 | 144 | 7,936 | — |
| chr1_15759000_T_G | chr1:15759000 | -1,664 | -408 | -6,848 | — |
| chr1_15759103_G_A | chr1:15759103 | 1,664 | 960 | 6,016 | — |
| chr1_15759157_C_A | chr1:15759157 | 1,664 | 616 | 5,632 | — |
| chr1_15759178_G_T | chr1:15759178 | 1,600 | 688 | 5,632 | — |
| chr1_15759146_G_A | chr1:15759146 | -1,600 | -56 | -5,376 | — |
| chr1_15759155_C_A | chr1:15759155 | 1,600 | 480 | 4,736 | — |
| chr1_15758959_C_T | chr1:15758959 | 1,504 | 878 | 9,568 | — |
| chr1_15759220_C_G | chr1:15759220 | 1,504 | 112 | 4,864 | — |
| chr1_15759134_C_G | chr1:15759134 | 1,472 | 536 | 6,272 | — |
| chr1_15759133_C_T | chr1:15759133 | 1,472 | 552 | 5,248 | — |
| chr1_15759212_A_G | chr1:15759212 | -1,440 | -688 | -7,168 | — |
| chr1_15759148_G_T | chr1:15759148 | -1,408 | -480 | -8,832 | — |
| chr1_15759064_A_G | chr1:15759064 | -1,408 | -620 | -6,912 | — |
| chr1_15759097_A_G | chr1:15759097 | -1,408 | -380 | -5,888 | — |
| chr1_15759129_G_A | chr1:15759129 | 1,408 | 568 | 5,632 | — |
| chr1_15759130_G_T | chr1:15759130 | 1,408 | 1,312 | 5,632 | 6.6e-6 |
| chr1_15759057_A_C | chr1:15759057 | -1,344 | -524 | -6,848 | — |
| chr1_15759076_A_G | chr1:15759076 | -1,312 | -744 | -7,680 | — |
| chr1_15758996_G_A | chr1:15758996 | 1,312 | 42 | 4,480 | — |
| chr1_15759149_G_T | chr1:15759149 | -1,280 | -600 | -6,912 | — |
| chr1_15758960_C_T | chr1:15758960 | 1,248 | 976 | 9,248 | — |
| chr1_15758945_G_A | chr1:15758945 | 1,216 | 476 | 9,376 | — |
| chr1_15759165_A_T | chr1:15759165 | 1,216 | 672 | 5,376 | — |
| chr1_15759220_C_T | chr1:15759220 | 1,184 | 160 | 6,656 | — |
| chr1_15759148_G_C | chr1:15759148 | -1,152 | -664 | -9,088 | 1.3e-5 |
| chr1_15758959_C_A | chr1:15758959 | 1,152 | 740 | 8,064 | — |
| chr1_15759147_C_T | chr1:15759147 | -1,152 | -416 | -6,912 | 6.6e-6 |
| chr1_15758997_G_A | chr1:15758997 | 1,120 | 214 | 5,088 | — |
| chr1_15759049_A_C | chr1:15759049 | -1,088 | -568 | -6,720 | — |
| chr1_15759143_A_G | chr1:15759143 | -1,088 | -656 | -5,760 | — |
| chr1_15759223_C_A | chr1:15759223 | 1,088 | 160 | 5,632 | — |
| chr1_15759005_T_G | chr1:15759005 | -1,056 | -382 | -5,440 | — |
| chr1_15759093_G_C | chr1:15759093 | 1,056 | 368 | 4,480 | — |
| chr1_15758969_G_A | chr1:15758969 | 992 | 410 | 5,920 | — |
| chr1_15759159_C_T | chr1:15759159 | 960 | 656 | 4,736 | — |
| chr1_15759104_A_G | chr1:15759104 | -928 | -512 | -4,864 | — |
| chr1_15758980_A_C | chr1:15758980 | 896 | -850 | -9,888 | — |
| chr1_15759151_A_C | chr1:15759151 | -896 | -688 | -8,192 | — |
| chr1_15758960_C_A | chr1:15758960 | 896 | 674 | 6,688 | — |
| chr1_15758962_C_A | chr1:15758962 | 896 | 440 | 5,984 | — |
| chr1_15759172_A_C | chr1:15759172 | -896 | -592 | -5,120 | — |
| chr1_15759167_G_C | chr1:15759167 | -896 | -528 | -4,864 | — |
| chr1_15759153_C_T | chr1:15759153 | 832 | 1,336 | 10,368 | — |
| chr1_15759146_G_C | chr1:15759146 | 832 | 792 | 6,656 | — |
| chr1_15759120_C_A | chr1:15759120 | 832 | 536 | 5,248 | — |
| chr1_15759151_A_G | chr1:15759151 | -768 | -1,104 | -8,192 | — |
| chr1_15758978_G_A | chr1:15758978 | 768 | 158 | 5,696 | — |
| chr1_15759003_G_T | chr1:15759003 | 768 | 474 | 4,928 | — |
| chr1_15759106_T_C | chr1:15759106 | -736 | -808 | -7,296 | — |
| chr1_15758957_G_T | chr1:15758957 | 736 | 532 | 5,376 | — |
| chr1_15759174_T_G | chr1:15759174 | -704 | -864 | -4,864 | — |
| chr1_15758981_G_T | chr1:15758981 | 704 | 334 | 4,800 | — |
| chr1_15759134_C_T | chr1:15759134 | 704 | 512 | 4,608 | 6.6e-6 |
| chr1_15759103_G_T | chr1:15759103 | 672 | 144 | 4,992 | — |
| chr1_15758957_G_A | chr1:15758957 | 640 | 878 | 9,728 | — |
| chr1_15758998_G_A | chr1:15758998 | 640 | 428 | 6,784 | — |
| chr1_15758953_C_A | chr1:15758953 | -640 | 382 | 5,888 | — |
| chr1_15758963_C_T | chr1:15758963 | 608 | 548 | 7,008 | — |
| chr1_15759145_G_C | chr1:15759145 | -608 | -288 | -6,016 | — |
| chr1_15758954_C_A | chr1:15758954 | 544 | 396 | 6,688 | — |
| chr1_15758961_C_T | chr1:15758961 | 544 | 602 | 5,888 | — |
| chr1_15759005_T_C | chr1:15759005 | -544 | -496 | -5,472 | — |
| chr1_15759092_G_A | chr1:15759092 | 544 | 424 | 5,376 | — |
| chr1_15759088_G_T | chr1:15759088 | -544 | -352 | -4,864 | — |
| chr1_15758956_G_T | chr1:15758956 | 544 | 474 | 4,768 | — |
| chr1_15758981_G_A | chr1:15758981 | 512 | 344 | 4,448 | — |
| chr1_15758982_G_A | chr1:15758982 | 480 | 374 | 5,440 | — |
| chr1_15759104_A_C | chr1:15759104 | -480 | -688 | -5,248 | — |
| chr1_15758977_T_G | chr1:15758977 | 480 | -260 | -4,448 | — |
| chr1_15758980_A_G | chr1:15758980 | -448 | 42 | -5,536 | — |
| chr1_15759230_C_A | chr1:15759230 | 448 | 464 | 5,120 | — |
| chr1_15759231_G_T | chr1:15759231 | -448 | 320 | 4,864 | 6.6e-6 |
| chr1_15758958_A_G | chr1:15758958 | 416 | -404 | -8,032 | — |
| chr1_15759106_T_G | chr1:15759106 | -416 | -896 | -6,144 | — |
| chr1_15758968_C_A | chr1:15758968 | -416 | 386 | 6,080 | — |
| chr1_15758988_G_A | chr1:15758988 | 416 | 306 | 6,016 | — |
| chr1_15759000_T_C | chr1:15759000 | -416 | -412 | -5,056 | — |
| chr1_15758969_G_T | chr1:15758969 | 384 | 470 | 5,920 | — |
| chr1_15758968_C_T | chr1:15758968 | -384 | 372 | 5,600 | — |
| chr1_15759110_A_G | chr1:15759110 | 384 | -280 | -5,248 | — |
| chr1_15758946_T_C | chr1:15758946 | -352 | -464 | -6,720 | — |
| chr1_15758949_C_T | chr1:15758949 | 320 | 524 | 7,584 | — |
| chr1_15758950_C_T | chr1:15758950 | 320 | 402 | 7,008 | — |
| chr1_15758966_C_A | chr1:15758966 | -320 | 614 | 6,592 | — |
| chr1_15758955_G_T | chr1:15758955 | 320 | 404 | 6,176 | — |
| chr1_15758972_G_A | chr1:15758972 | 320 | 398 | 4,704 | 6.6e-6 |
| chr1_15759164_A_T | chr1:15759164 | 256 | 416 | 6,912 | — |
| chr1_15758952_G_T | chr1:15758952 | -256 | 364 | 6,464 | — |
| chr1_15759134_C_A | chr1:15759134 | 256 | 616 | 6,016 | 4.6e-5 |
| chr1_15758961_C_A | chr1:15758961 | 256 | 236 | 5,056 | — |
| chr1_15758953_C_T | chr1:15758953 | 224 | 496 | 7,296 | 6.6e-6 |
| chr1_15759024_C_A | chr1:15759024 | -224 | 112 | 6,784 | — |
| chr1_15758954_C_T | chr1:15758954 | 224 | 404 | 5,536 | 6.6e-6 |
| chr1_15759118_A_C | chr1:15759118 | -192 | -960 | -10,368 | — |
| chr1_15758951_A_G | chr1:15758951 | -192 | -424 | -7,584 | — |
| chr1_15758951_A_C | chr1:15758951 | -192 | -358 | -7,424 | — |
| chr1_15758973_C_T | chr1:15758973 | 192 | 468 | 6,816 | 3.1e-4 |
| chr1_15758984_G_T | chr1:15758984 | -192 | 396 | 5,184 | 6.6e-6 |
| chr1_15758967_G_A | chr1:15758967 | -160 | 450 | 7,200 | — |
| chr1_15758963_C_A | chr1:15758963 | 160 | 480 | 6,944 | — |
| chr1_15758948_G_A | chr1:15758948 | -160 | 440 | 6,048 | — |
| chr1_15759229_C_A | chr1:15759229 | 160 | 736 | 5,888 | — |
| chr1_15758975_C_A | chr1:15758975 | 160 | 328 | 5,792 | — |
| chr1_15758972_G_T | chr1:15758972 | 160 | 442 | 4,896 | — |
| chr1_15758989_C_A | chr1:15758989 | -160 | 384 | 4,544 | — |
| chr1_15758987_T_G | chr1:15758987 | -128 | -380 | -7,520 | — |
| chr1_15758971_C_A | chr1:15758971 | -128 | 506 | 6,560 | — |
| chr1_15758947_C_T | chr1:15758947 | -128 | 344 | 6,272 | — |
| chr1_15759124_A_C | chr1:15759124 | 128 | -592 | -6,016 | — |
| chr1_15759175_C_T | chr1:15759175 | 128 | 712 | 5,632 | 9.9e-5 |
| chr1_15758946_T_G | chr1:15758946 | -128 | -410 | -5,088 | — |
| chr1_15758982_G_T | chr1:15758982 | -128 | 326 | 4,608 | 7.9e-5 |
| chr1_15758947_C_A | chr1:15758947 | -96 | 504 | 8,640 | 1.3e-5 |
| chr1_15759097_A_C | chr1:15759097 | 96 | -548 | -6,912 | — |
| chr1_15758956_G_A | chr1:15758956 | 96 | 384 | 6,080 | — |
| chr1_15758984_G_A | chr1:15758984 | -96 | 462 | 4,992 | — |
| chr1_15758958_A_C | chr1:15758958 | 64 | -310 | -7,072 | — |
| chr1_15758948_G_T | chr1:15758948 | -64 | 600 | 6,720 | 6.6e-6 |
| chr1_15758977_T_C | chr1:15758977 | 64 | -370 | -6,176 | — |
| chr1_15758967_G_T | chr1:15758967 | 64 | 408 | 6,112 | 6.6e-6 |
| chr1_15758955_G_A | chr1:15758955 | 64 | 356 | 6,016 | — |
| chr1_15758945_G_T | chr1:15758945 | 64 | 332 | 5,760 | — |
| chr1_15758966_C_T | chr1:15758966 | 64 | 558 | 5,248 | — |
| chr1_15759194_A_C | chr1:15759194 | 64 | 832 | 4,864 | — |
| chr1_15759228_G_T | chr1:15759228 | 64 | 416 | 4,864 | — |
| chr1_15758989_C_T | chr1:15758989 | 64 | 438 | 4,672 | — |
| chr1_15758971_C_T | chr1:15758971 | -32 | 452 | 6,464 | — |
| chr1_15758993_T_C | chr1:15758993 | 32 | -446 | -6,304 | — |
| chr1_15759116_G_C | chr1:15759116 | -32 | -376 | -4,608 | — |
| chr1_15758949_C_A | chr1:15758949 | 0 | 468 | 6,400 | — |
| chr1_15758962_C_T | chr1:15758962 | 0 | 256 | 6,368 | — |
| chr1_15759092_G_T | chr1:15759092 | 0 | 40 | 5,120 | — |
| chr1_15759108_C_A | chr1:15759108 | 0 | 520 | 4,864 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.