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SS18L1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near SS18L1
chr20:62,043,768..62,282,514, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr20_62060801_C_T | chr20:62060801 | 0.793 | 0.371 | 1.000 | <0.001% |
| chr20_62060808_A_T | chr20:62060808 | 0.260 | 0.393 | 0.471 | — |
| chr20_62060746_C_G | chr20:62060746 | 0.185 | 0.203 | 0.406 | — |
| chr20_62121705_T_G | chr20:62121705 | 0.230 | 0.178 | 0.376 | — |
| chr20_62121713_G_T | chr20:62121713 | -0.223 | -0.043 | -0.259 | — |
| chr20_62121682_G_A | chr20:62121682 | -0.193 | -0.079 | -0.176 | — |
| chr20_62121706_A_G | chr20:62121706 | 0.176 | 0.140 | 0.165 | — |
| chr20_62121705_T_C | chr20:62121705 | 0.087 | 0.053 | 0.306 | — |
| chr20_62121707_T_C | chr20:62121707 | 0.170 | 0.117 | 0.188 | — |
| chr20_62121696_G_A | chr20:62121696 | 0.163 | 0.081 | -0.141 | — |
| chr20_62121708_T_C | chr20:62121708 | 0.163 | 0.013 | 0.118 | — |
| chr20_62121715_G_A | chr20:62121715 | -0.156 | -0.096 | -0.259 | — |
| chr20_62060801_C_G | chr20:62060801 | 0.086 | -0.008 | 0.259 | — |
| chr20_62121701_A_C | chr20:62121701 | -0.020 | 0.056 | 0.259 | — |
| chr20_62121714_G_A | chr20:62121714 | -0.060 | 0.015 | -0.259 | — |
| chr20_62121703_T_C | chr20:62121703 | 0.030 | 0.038 | 0.235 | — |
| chr20_62060808_A_C | chr20:62060808 | 0.096 | 0.102 | 0.224 | — |
| chr20_62121700_G_A | chr20:62121700 | -0.087 | -0.043 | -0.224 | — |
| chr20_62060785_A_C | chr20:62060785 | -0.024 | -0.028 | -0.212 | — |
| chr20_62060788_G_C | chr20:62060788 | -0.035 | -0.011 | -0.200 | — |
| chr20_62060804_C_G | chr20:62060804 | 0.087 | 0.042 | 0.200 | — |
| chr20_62121707_T_G | chr20:62121707 | 0.113 | 0.122 | 0.094 | — |
| chr20_62121708_T_G | chr20:62121708 | 0.113 | 0.081 | 0.118 | — |
| chr20_62121677_C_A | chr20:62121677 | 0.110 | 0.043 | 0.176 | 0.018% |
| chr20_62121683_C_A | chr20:62121683 | -0.110 | -0.051 | -0.094 | — |
| chr20_62121675_C_G | chr20:62121675 | -0.106 | 0.025 | 0.082 | 0.0013% |
| chr20_62121701_A_T | chr20:62121701 | 0.106 | 0.030 | 0.094 | — |
| chr20_62121712_A_C | chr20:62121712 | 0.100 | 0.137 | 0.188 | — |
| chr20_62060802_C_G | chr20:62060802 | 0.052 | 0.038 | 0.182 | — |
| chr20_62121699_A_C | chr20:62121699 | -0.103 | -0.041 | -0.047 | — |
| chr20_62121704_T_G | chr20:62121704 | 0.103 | 0.025 | 0.153 | — |
| chr20_62060801_C_A | chr20:62060801 | 0.102 | 0.032 | 0.171 | — |
| chr20_62121662_G_A | chr20:62121662 | 0.100 | 0.030 | -0.118 | — |
| chr20_62121681_G_T | chr20:62121681 | -0.100 | -0.003 | 0.047 | — |
| chr20_62121692_G_C | chr20:62121692 | -0.070 | -0.069 | -0.176 | — |
| chr20_62121695_A_T | chr20:62121695 | -0.100 | -0.086 | -0.071 | — |
| chr20_62121709_T_C | chr20:62121709 | 0.100 | 0.038 | 0.094 | — |
| chr20_62060767_T_C | chr20:62060767 | -0.034 | -0.022 | -0.171 | — |
| chr20_62121672_A_G | chr20:62121672 | -0.097 | -0.005 | 0.024 | — |
| chr20_62121665_C_T | chr20:62121665 | -0.020 | -0.018 | -0.165 | — |
| chr20_62121682_G_C | chr20:62121682 | -0.093 | -0.015 | 0.012 | — |
| chr20_62121693_C_G | chr20:62121693 | -0.017 | -0.046 | -0.165 | — |
| chr20_62121697_T_A | chr20:62121697 | -0.063 | -0.074 | -0.165 | — |
| chr20_62121709_T_A | chr20:62121709 | 0.067 | 0.005 | -0.165 | — |
| chr20_62121713_G_C | chr20:62121713 | 0.093 | 0.165 | 0.024 | — |
| chr20_62121714_G_T | chr20:62121714 | -0.033 | 0.071 | -0.165 | — |
| chr20_62102706_T_A | chr20:62102706 | 0.092 | 0.003 | 0.094 | — |
| chr20_62060805_C_G | chr20:62060805 | 0.053 | 0.020 | 0.153 | — |
| chr20_62060818_A_C | chr20:62060818 | 0.037 | 0.041 | 0.153 | — |
| chr20_62121661_G_T | chr20:62121661 | 0.087 | 0.038 | 0.094 | — |
| chr20_62121662_G_C | chr20:62121662 | 0.087 | 0.005 | -0.035 | — |
| chr20_62121679_G_T | chr20:62121679 | 0.037 | 0.048 | 0.153 | — |
| chr20_62121688_G_C | chr20:62121688 | -0.087 | 0.005 | -0.024 | — |
| chr20_62121689_G_A | chr20:62121689 | -0.023 | -0.023 | 0.153 | — |
| chr20_62121691_A_T | chr20:62121691 | -0.087 | -0.043 | -0.118 | — |
| chr20_62121692_G_T | chr20:62121692 | -0.080 | -0.081 | -0.153 | — |
| chr20_62121698_C_A | chr20:62121698 | -0.050 | -0.081 | -0.153 | — |
| chr20_62121709_T_G | chr20:62121709 | 0.083 | 0.063 | -0.024 | — |
| chr20_62060727_C_G | chr20:62060727 | 0.027 | 0.014 | 0.141 | — |
| chr20_62121673_G_T | chr20:62121673 | -0.050 | -0.058 | -0.141 | — |
| chr20_62121681_G_A | chr20:62121681 | -0.080 | -0.008 | 0.012 | <0.001% |
| chr20_62121690_T_A | chr20:62121690 | 0.080 | 0.107 | -0.012 | — |
| chr20_62121691_A_C | chr20:62121691 | -0.053 | -0.043 | -0.141 | — |
| chr20_62121673_G_A | chr20:62121673 | 0.077 | 0.033 | -0.047 | — |
| chr20_62121688_G_T | chr20:62121688 | -0.077 | -0.036 | -0.059 | — |
| chr20_62121695_A_C | chr20:62121695 | -0.077 | -0.056 | -0.035 | — |
| chr20_62121707_T_A | chr20:62121707 | 0.077 | 0.038 | 0.071 | — |
| chr20_62060768_C_G | chr20:62060768 | 0.023 | 0.014 | 0.129 | — |
| chr20_62121665_C_A | chr20:62121665 | -0.060 | -0.053 | -0.129 | — |
| chr20_62121667_A_C | chr20:62121667 | 0.017 | -0.023 | -0.129 | — |
| chr20_62121674_G_A | chr20:62121674 | -0.073 | -0.061 | -0.118 | — |
| chr20_62121710_T_G | chr20:62121710 | 0.073 | 0.069 | 0.012 | — |
| chr20_62060726_C_G | chr20:62060726 | 0.007 | 0.010 | 0.124 | — |
| chr20_62060754_G_A | chr20:62060754 | -0.012 | -0.006 | -0.124 | — |
| chr20_62060798_G_A | chr20:62060798 | -0.030 | -0.013 | -0.124 | — |
| chr20_62121661_G_A | chr20:62121661 | 0.070 | 0.036 | 0.024 | — |
| chr20_62121701_A_G | chr20:62121701 | -0.070 | -0.023 | 0.071 | — |
| chr20_62121702_A_C | chr20:62121702 | -0.070 | -0.025 | 0.035 | — |
| chr20_62060730_C_G | chr20:62060730 | 0.036 | 0.025 | 0.118 | — |
| chr20_62060757_A_C | chr20:62060757 | -0.019 | -0.014 | -0.118 | — |
| chr20_62060804_C_A | chr20:62060804 | 0.045 | 0.022 | 0.118 | — |
| chr20_62121663_T_G | chr20:62121663 | 0.010 | -0.020 | -0.118 | — |
| chr20_62121675_C_T | chr20:62121675 | 0.023 | 0.066 | 0.118 | — |
| chr20_62121679_G_C | chr20:62121679 | -0.003 | 0.008 | 0.118 | — |
| chr20_62121680_A_T | chr20:62121680 | -0.023 | 0.008 | 0.118 | — |
| chr20_62121690_T_C | chr20:62121690 | 0.013 | -0.030 | -0.118 | — |
| chr20_62121693_C_A | chr20:62121693 | -0.067 | -0.041 | -0.059 | — |
| chr20_62121712_A_G | chr20:62121712 | -0.067 | -0.003 | -0.094 | — |
| chr20_62102659_A_G | chr20:62102659 | -0.005 | -0.005 | -0.115 | — |
| chr20_62060689_A_C | chr20:62060689 | 0.050 | 0.028 | 0.112 | — |
| chr20_62060691_G_C | chr20:62060691 | 0.041 | 0.028 | 0.112 | — |
| chr20_62060729_T_C | chr20:62060729 | -0.026 | -0.015 | -0.112 | — |
| chr20_62060769_C_G | chr20:62060769 | 0.006 | 0.003 | 0.112 | — |
| chr20_62060797_T_A | chr20:62060797 | -0.022 | -0.015 | -0.112 | — |
| chr20_62060803_A_G | chr20:62060803 | 0.027 | -0.001 | 0.112 | — |
| chr20_62121685_C_G | chr20:62121685 | 0.063 | -0.005 | -0.082 | — |
| chr20_62121694_C_G | chr20:62121694 | -0.063 | 0.028 | 0.000 | — |
| chr20_62121711_A_T | chr20:62121711 | -0.063 | -0.063 | 0.024 | — |
| chr20_62060747_T_G | chr20:62060747 | -0.006 | -0.016 | 0.106 | — |
| chr20_62060800_C_G | chr20:62060800 | 0.035 | 0.006 | 0.106 | — |
| chr20_62102655_C_G | chr20:62102655 | -0.012 | 0.000 | -0.106 | — |
| chr20_62121663_T_A | chr20:62121663 | 0.017 | -0.023 | -0.106 | — |
| chr20_62121674_G_T | chr20:62121674 | -0.050 | -0.020 | -0.106 | — |
| chr20_62121677_C_G | chr20:62121677 | 0.060 | 0.000 | 0.035 | — |
| chr20_62121684_C_A | chr20:62121684 | -0.037 | 0.015 | 0.106 | — |
| chr20_62121689_G_T | chr20:62121689 | 0.000 | -0.008 | 0.106 | — |
| chr20_62121704_T_C | chr20:62121704 | 0.043 | -0.028 | 0.106 | — |
| chr20_62060733_C_G | chr20:62060733 | 0.017 | 0.015 | 0.100 | — |
| chr20_62060754_G_C | chr20:62060754 | -0.018 | -0.015 | -0.100 | — |
| chr20_62060770_C_G | chr20:62060770 | -0.003 | 0.000 | 0.100 | — |
| chr20_62060782_A_C | chr20:62060782 | -0.034 | -0.019 | -0.100 | — |
| chr20_62060798_G_T | chr20:62060798 | -0.017 | -0.009 | -0.100 | — |
| chr20_62060813_T_G | chr20:62060813 | -0.017 | -0.023 | 0.100 | — |
| chr20_62121676_T_C | chr20:62121676 | 0.057 | 0.015 | -0.035 | — |
| chr20_62121684_C_T | chr20:62121684 | -0.057 | -0.046 | -0.071 | — |
| chr20_62121694_C_A | chr20:62121694 | -0.057 | -0.015 | -0.082 | — |
| chr20_62102643_A_C | chr20:62102643 | 0.007 | -0.004 | 0.097 | — |
| chr20_62121660_G_A | chr20:62121660 | -0.055 | -0.023 | -0.035 | <0.001% |
| chr20_62121660_G_C | chr20:62121660 | -0.055 | -0.046 | -0.082 | — |
| chr20_62060720_A_C | chr20:62060720 | 0.007 | 0.003 | 0.094 | — |
| chr20_62060759_T_G | chr20:62060759 | -0.002 | -0.006 | 0.094 | — |
| chr20_62060775_G_A | chr20:62060775 | -0.004 | 0.000 | -0.094 | — |
| chr20_62060781_A_G | chr20:62060781 | -0.036 | -0.011 | -0.094 | — |
| chr20_62060794_G_A | chr20:62060794 | 0.002 | 0.004 | -0.094 | — |
| chr20_62060796_G_T | chr20:62060796 | -0.008 | 0.006 | -0.094 | — |
| chr20_62102687_T_A | chr20:62102687 | 0.000 | -0.004 | 0.094 | — |
| chr20_62121664_A_T | chr20:62121664 | -0.042 | 0.066 | 0.094 | — |
| chr20_62121678_C_G | chr20:62121678 | -0.017 | -0.020 | -0.094 | — |
| chr20_62121691_A_G | chr20:62121691 | 0.020 | -0.091 | -0.094 | — |
| chr20_62121696_G_T | chr20:62121696 | -0.017 | -0.025 | -0.094 | — |
| chr20_62121697_T_C | chr20:62121697 | 0.010 | -0.056 | -0.094 | — |
| chr20_62121697_T_G | chr20:62121697 | -0.023 | -0.043 | -0.094 | — |
| chr20_62121698_C_T | chr20:62121698 | -0.003 | -0.056 | -0.094 | <0.001% |
| chr20_62121700_G_T | chr20:62121700 | -0.050 | -0.046 | -0.094 | — |
| chr20_62121703_T_G | chr20:62121703 | 0.043 | 0.028 | 0.094 | — |
| chr20_62121706_A_C | chr20:62121706 | 0.053 | 0.056 | 0.000 | — |
| chr20_62121708_T_A | chr20:62121708 | 0.053 | 0.020 | 0.000 | — |
| chr20_62121662_G_T | chr20:62121662 | 0.052 | 0.008 | -0.012 | — |
| chr20_62060727_C_A | chr20:62060727 | 0.031 | 0.022 | 0.088 | — |
| chr20_62060728_C_G | chr20:62060728 | 0.020 | 0.009 | 0.088 | — |
| chr20_62060802_C_T | chr20:62060802 | 0.044 | 0.029 | 0.088 | — |
| chr20_62060813_T_C | chr20:62060813 | -0.015 | -0.009 | -0.088 | — |
| chr20_62121658_C_G | chr20:62121658 | 0.050 | -0.038 | -0.059 | — |
| chr20_62060714_G_T | chr20:62060714 | -0.001 | 0.001 | -0.082 | — |
| chr20_62060731_C_G | chr20:62060731 | 0.007 | 0.010 | 0.082 | — |
| chr20_62060814_C_A | chr20:62060814 | 0.001 | 0.013 | -0.082 | — |
| chr20_62102650_C_T | chr20:62102650 | -0.007 | -0.008 | -0.082 | — |
| chr20_62102682_A_C | chr20:62102682 | 0.036 | 0.003 | 0.082 | — |
| chr20_62121658_C_A | chr20:62121658 | 0.003 | 0.000 | 0.082 | — |
| chr20_62121661_G_C | chr20:62121661 | 0.047 | -0.003 | 0.012 | — |
| chr20_62121664_A_C | chr20:62121664 | 0.003 | 0.020 | 0.082 | — |
| chr20_62121665_C_G | chr20:62121665 | -0.007 | -0.020 | -0.082 | — |
| chr20_62121668_G_T | chr20:62121668 | 0.047 | 0.028 | 0.047 | — |
| chr20_62121669_C_A | chr20:62121669 | -0.040 | -0.003 | -0.082 | <0.001% |
| chr20_62121672_A_T | chr20:62121672 | -0.017 | 0.015 | 0.082 | — |
| chr20_62121685_C_A | chr20:62121685 | -0.013 | 0.003 | 0.082 | — |
| chr20_62121685_C_T | chr20:62121685 | 0.047 | 0.003 | 0.035 | — |
| chr20_62121690_T_G | chr20:62121690 | -0.013 | -0.051 | -0.082 | — |
| chr20_62121694_C_T | chr20:62121694 | -0.010 | -0.003 | 0.082 | — |
| chr20_62060820_C_A | chr20:62060820 | 0.044 | 0.047 | 0.000 | — |
| chr20_62060691_G_T | chr20:62060691 | 0.030 | 0.023 | 0.076 | — |
| chr20_62060728_C_A | chr20:62060728 | 0.023 | 0.013 | 0.076 | — |
| chr20_62060730_C_A | chr20:62060730 | 0.035 | 0.025 | 0.076 | — |
| chr20_62060730_C_T | chr20:62060730 | 0.022 | 0.022 | 0.076 | — |
| chr20_62060747_T_C | chr20:62060747 | -0.019 | -0.011 | -0.076 | — |
| chr20_62060795_G_A | chr20:62060795 | 0.004 | 0.000 | -0.076 | — |
| chr20_62060795_G_T | chr20:62060795 | 0.003 | 0.000 | -0.076 | — |
| chr20_62060806_T_G | chr20:62060806 | -0.009 | -0.020 | 0.076 | — |
| chr20_62102652_T_A | chr20:62102652 | 0.008 | -0.005 | 0.076 | — |
| chr20_62121663_T_C | chr20:62121663 | 0.043 | -0.030 | 0.012 | — |
| chr20_62121667_A_G | chr20:62121667 | 0.043 | 0.003 | 0.012 | — |
| chr20_62121681_G_C | chr20:62121681 | -0.043 | -0.030 | -0.035 | — |
| chr20_62121713_G_A | chr20:62121713 | 0.043 | 0.051 | -0.071 | <0.001% |
| chr20_62102736_T_G | chr20:62102736 | -0.042 | 0.003 | 0.044 | — |
| chr20_62060714_G_C | chr20:62060714 | -0.007 | -0.006 | -0.071 | — |
| chr20_62060732_A_G | chr20:62060732 | -0.004 | -0.005 | 0.071 | — |
| chr20_62060738_G_A | chr20:62060738 | 0.002 | -0.004 | -0.071 | — |
| chr20_62060744_G_A | chr20:62060744 | -0.002 | 0.001 | -0.071 | — |
| chr20_62060788_G_T | chr20:62060788 | 0.005 | 0.013 | -0.071 | — |
| chr20_62060794_G_T | chr20:62060794 | -0.005 | -0.006 | -0.071 | — |
| chr20_62060806_T_C | chr20:62060806 | -0.013 | -0.030 | -0.071 | — |
| chr20_62102650_C_G | chr20:62102650 | -0.005 | -0.013 | -0.071 | — |
| chr20_62102652_T_G | chr20:62102652 | -0.006 | -0.016 | -0.071 | — |
| chr20_62102664_T_C | chr20:62102664 | -0.001 | -0.001 | 0.071 | — |
| chr20_62121659_C_T | chr20:62121659 | 0.012 | 0.048 | 0.071 | — |
| chr20_62121668_G_C | chr20:62121668 | 0.040 | 0.013 | 0.012 | — |
| chr20_62121669_C_G | chr20:62121669 | -0.040 | 0.018 | 0.012 | — |
| chr20_62121670_G_C | chr20:62121670 | 0.003 | 0.008 | 0.071 | — |
| chr20_62121672_A_C | chr20:62121672 | 0.023 | -0.013 | 0.071 | — |
| chr20_62121679_G_A | chr20:62121679 | -0.020 | 0.003 | 0.071 | 0.0013% |
| chr20_62121687_C_A | chr20:62121687 | 0.000 | 0.018 | 0.071 | — |
| chr20_62121696_G_C | chr20:62121696 | -0.037 | -0.033 | -0.071 | — |
| chr20_62121702_A_G | chr20:62121702 | 0.020 | 0.013 | 0.071 | <0.001% |
| chr20_62121703_T_A | chr20:62121703 | 0.017 | 0.010 | 0.071 | <0.001% |
| chr20_62121704_T_A | chr20:62121704 | 0.013 | -0.018 | -0.071 | — |
| chr20_62121706_A_T | chr20:62121706 | -0.007 | -0.015 | -0.071 | — |
| chr20_62121711_A_C | chr20:62121711 | 0.010 | 0.069 | 0.071 | — |
| chr20_62121712_A_T | chr20:62121712 | -0.010 | -0.023 | -0.071 | — |
| chr20_62060754_G_T | chr20:62060754 | 0.038 | 0.047 | 0.047 | — |
| chr20_62102644_A_C | chr20:62102644 | 0.008 | -0.005 | 0.068 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.