Home / Gene

ST3GAL5-AS1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near ST3GAL5-AS1

chr2:85,789,279..85,992,252, gene body plus 100 kb. Showing the strongest 200 by effect size.

VariantPosition PXR FXR AhR AF
chr2_85799476_G_Cchr2:8579947651,71212,67223,808—   
chr2_85799479_C_Gchr2:8579947932,51210,30414,592—   
chr2_85799476_G_Achr2:8579947629,4407,42412,288—   
chr2_85799479_C_Tchr2:8579947927,6488,70410,752—   
chr2_85799478_T_Achr2:8579947827,3928,96010,752—   
chr2_85799477_G_Cchr2:8579947725,6006,72011,776—   
chr2_85799475_G_Cchr2:8579947524,5766,14412,288—   
chr2_85799480_T_Achr2:8579948022,1447,8729,216—   
chr2_85795122_C_Gchr2:8579512221,6966,2409,984—   
chr2_85799478_T_Cchr2:8579947821,5046,91212,032—   
chr2_85799477_G_Tchr2:8579947720,9925,8248,960—   
chr2_85799476_G_Tchr2:8579947619,2004,2248,192—   
chr2_85795187_C_Achr2:8579518719,1365,98410,496—   
chr2_85799477_G_Achr2:8579947718,6885,0568,192—   
chr2_85799475_G_Achr2:8579947517,6644,8007,424—   
chr2_85795122_C_Tchr2:8579512216,9604,7367,424—   
chr2_85795145_A_Tchr2:8579514514,7204,8808,832—   
chr2_85799479_C_Achr2:8579947914,5924,8645,376—   
chr2_85799467_G_Tchr2:85799467-14,080-4,544-6,656—   
chr2_85799475_G_Tchr2:8579947513,8243,9046,912—   
chr2_85795120_C_Gchr2:8579512012,7364,0006,784—   
chr2_85799474_G_Cchr2:8579947412,2884,0327,424—   
chr2_85795121_C_Gchr2:8579512111,9683,0086,656—   
chr2_85795124_C_Gchr2:8579512411,9043,3447,040—   
chr2_85799480_T_Gchr2:8579948011,6483,7127,424—   
chr2_85795121_C_Achr2:8579512111,5843,0086,400—   
chr2_85795100_T_Achr2:85795100-11,392-3,360-6,144—   
chr2_85795119_C_Gchr2:8579511911,1363,3927,680—   
chr2_85795121_C_Tchr2:8579512111,1362,8166,144—   
chr2_85795084_G_Cchr2:85795084-10,944-2,912-8,704—   
chr2_85799461_G_Achr2:85799461-10,496-3,520-3,584—   
chr2_85795082_C_Gchr2:85795082-10,432-2,944-5,888—   
chr2_85795095_G_Achr2:8579509510,3043,2165,248—   
chr2_85799467_G_Achr2:85799467-10,112-3,392-4,608—   
chr2_85795108_A_Tchr2:85795108-9,856-2,784-5,376—   
chr2_85796389_T_Cchr2:857963899,6641,3129,856—   
chr2_85795100_T_Cchr2:85795100-9,600-2,928-4,992—   
chr2_85795120_C_Achr2:857951209,6003,3607,040—   
chr2_85795124_C_Achr2:857951249,6002,8646,400—   
chr2_85799467_G_Cchr2:85799467-9,600-3,392-3,328—   
chr2_85795120_C_Tchr2:857951209,4722,3844,736—   
chr2_85799459_G_Achr2:85799459-9,344-3,264-4,608—   
chr2_85795100_T_Gchr2:85795100-9,280-2,816-3,584—   
chr2_85795082_C_Tchr2:85795082-9,216-2,608-6,784—   
chr2_85795106_T_Gchr2:85795106-9,216-2,848-4,096—   
chr2_85799486_A_Tchr2:85799486-9,216-3,200-3,584—   
chr2_85795097_G_Achr2:857950979,1522,2724,480—   
chr2_85795187_C_Gchr2:857951879,1522,6566,400—   
chr2_85795101_C_Achr2:857951019,0883,5525,248—   
chr2_85795084_G_Achr2:85795084-8,960-2,464-6,784—   
chr2_85799464_G_Cchr2:85799464-8,960-2,944-1,280—   
chr2_85795158_A_Cchr2:85795158-8,832-2,256-2,944—   
chr2_85799481_T_Achr2:857994818,8322,1763,072—   
chr2_85799461_G_Cchr2:85799461-8,576-3,456-2,304—   
chr2_85799459_G_Cchr2:85799459-8,320-2,560-1,536—   
chr2_85795147_A_Gchr2:857951478,1921,2168,576—   
chr2_85799462_G_Achr2:85799462-8,192-2,496-1,536—   
chr2_85799481_T_Gchr2:857994818,0641,9845,120—   
chr2_85795098_G_Cchr2:85795098-7,936-2,800-3,840—   
chr2_85799483_T_Cchr2:857994837,9361,7284,864—   
chr2_85799459_G_Tchr2:85799459-7,808-2,880-3,584—   
chr2_85799464_G_Achr2:85799464-7,680-2,624-3,072—   
chr2_85795098_G_Achr2:85795098-7,552-2,528-4,864—   
chr2_85795098_G_Tchr2:85795098-7,552-2,528-5,504—   
chr2_85799502_A_Gchr2:857995027,5522,8164,864—   
chr2_85796479_C_Tchr2:857964797,4883684,480—   
chr2_85799501_C_Gchr2:857995017,4242,3682,560—   
chr2_85799501_C_Tchr2:857995017,4242,8801,536—   
chr2_85795119_C_Tchr2:857951197,2962,0804,352—   
chr2_85799464_G_Tchr2:85799464-7,296-1,920-3,072—   
chr2_85799468_G_Achr2:85799468-7,168-2,624-5,376—   
chr2_85799505_T_Achr2:85799505-7,168-1,984-2,048—   
chr2_85795108_A_Gchr2:85795108-7,040-2,128-3,072—   
chr2_85795162_T_Cchr2:85795162-6,912-2,016-2,304—   
chr2_85799478_T_Gchr2:857994786,9122,3681,280—   
chr2_85799501_C_Achr2:857995016,9122,4322,048—   
chr2_85795093_C_Gchr2:85795093-6,784-1,728-4,096—   
chr2_85799470_A_Cchr2:85799470-6,784-1,536-2,304—   
chr2_85799462_G_Tchr2:85799462-6,656-1,984256—   
chr2_85795145_A_Cchr2:857951456,4642,0966,912—   
chr2_85795086_C_Achr2:85795086-6,400-2,048-3,840—   
chr2_85799499_C_Tchr2:85799499-6,400-1,792-2,560—   
chr2_85799509_A_Cchr2:85799509-6,400-1,536-2,048—   
chr2_85795102_A_Gchr2:85795102-6,336-1,920-2,816—   
chr2_85795106_T_Achr2:85795106-6,336-2,352-3,584—   
chr2_85795102_A_Tchr2:85795102-6,272-2,080-3,200—   
chr2_85799470_A_Gchr2:857994706,2722,3043,328—   
chr2_85799482_T_Achr2:857994826,2721,0241,792—   
chr2_85795174_A_Cchr2:857951746,2083,5688,960—   
chr2_85795086_C_Tchr2:85795086-6,208-1,968-3,968—   
chr2_85795160_C_Tchr2:857951606,2081,5682,432—   
chr2_85796456_C_Gchr2:857964566,2087843,968—   
chr2_85799463_G_Tchr2:85799463-6,144-2,624-1,792—   
chr2_85799488_C_Tchr2:85799488-6,144-2,368-3,072—   
chr2_85799466_A_Gchr2:85799466-6,016-1,664-11,776—   
chr2_85799480_T_Cchr2:857994806,0161,8563,840—   
chr2_85799485_A_Cchr2:857994856,0161,4723,328—   
chr2_85795143_G_Cchr2:85795143-5,952-1,456-3,328—   
chr2_85795084_G_Tchr2:85795084-5,888-1,744-4,864—   
chr2_85795083_C_Gchr2:85795083-5,760-1,792-4,480—   
chr2_85799473_T_Cchr2:857994735,7601,4083,072—   
chr2_85799511_A_Cchr2:85799511-5,760-1,408-2,816—   
chr2_85795089_G_Cchr2:857950895,6961,8084,096—   
chr2_85795118_T_Gchr2:85795118-5,696-1,472-1,920—   
chr2_85795204_T_Gchr2:857952045,6321,1524,224—   
chr2_85799508_T_Gchr2:85799508-5,632-2,048-1,792—   
chr2_85799509_A_Tchr2:85799509-5,632-512-2,048—   
chr2_85795107_C_Gchr2:85795107-5,504-1,632-3,072—   
chr2_85796371_G_Cchr2:857963715,5048003,840—   
chr2_85799463_G_Achr2:85799463-5,504-2,048-1,792—   
chr2_85795107_C_Achr2:85795107-5,440-1,680-3,840—   
chr2_85795085_C_Achr2:85795085-5,376-1,488-4,096—   
chr2_85795118_T_Cchr2:85795118-5,376-1,344-3,200—   
chr2_85799506_C_Tchr2:85799506-5,376-1,664-3,328—   
chr2_85795101_C_Tchr2:85795101-5,248-1,568-3,328—   
chr2_85795106_T_Cchr2:85795106-5,248-2,096-1,792—   
chr2_85799462_G_Cchr2:85799462-5,248-2,2401,536—   
chr2_85799503_T_Gchr2:857995035,2482,1124,096—   
chr2_85795083_C_Achr2:85795083-5,184-1,632-3,840—   
chr2_85795086_C_Gchr2:85795086-5,184-1,808-2,432—   
chr2_85795081_C_Gchr2:85795081-5,120-1,328-3,328—   
chr2_85795095_G_Cchr2:857950955,1201,5201,408—   
chr2_85799491_C_Gchr2:857994915,1201,7282,304—   
chr2_85799509_A_Gchr2:85799509-5,120-1,536-768—   
chr2_85795096_G_Achr2:857950965,0561,4561,920—   
chr2_85795104_G_Cchr2:85795104-5,056-1,424-2,432—   
chr2_85795085_C_Tchr2:85795085-4,992-1,360-4,224—   
chr2_85795103_G_Achr2:857951034,9922,1281,024—   
chr2_85795110_A_Cchr2:85795110-4,992-1,472-1,792—   
chr2_85799465_G_Cchr2:857994654,9927683,072—   
chr2_85799485_A_Gchr2:857994854,9929603,584—   
chr2_85799499_C_Achr2:85799499-4,992-1,472-2,048—   
chr2_85795074_G_Tchr2:85795074-4,928-832-3,712—   
chr2_85795083_C_Tchr2:85795083-4,928-1,392-3,584—   
chr2_85795102_A_Cchr2:85795102-4,928-1,392-2,176—   
chr2_85796392_C_Achr2:857963924,9285762,944—   
chr2_85795089_G_Tchr2:857950894,8641,4403,200—   
chr2_85795124_C_Tchr2:857951244,8641,2163,072—   
chr2_85795191_T_Gchr2:857951914,8641,2643,328—   
chr2_85799474_G_Achr2:857994744,8641,9842,816—   
chr2_85799510_T_Achr2:857995104,8642,3682,304—   
chr2_85796367_T_Gchr2:857963674,8006406,528—   
chr2_85795087_C_Achr2:85795087-4,800-1,360-3,328—   
chr2_85795126_C_Achr2:85795126-4,800-1,056-2,432—   
chr2_85795078_T_Achr2:857950784,7361,2003,200—   
chr2_85799461_G_Tchr2:85799461-4,736-2,112-1,792—   
chr2_85795081_C_Achr2:85795081-4,672-1,216-4,224—   
chr2_85795085_C_Gchr2:85795085-4,672-1,376-3,328—   
chr2_85795119_C_Achr2:857951194,6081,4243,456—   
chr2_85799457_G_Tchr2:85799457-4,608-3,328-2,304—   
chr2_85799493_C_Achr2:85799493-4,608-1,856-3,840—   
chr2_85795204_T_Achr2:857952044,5441,1843,200—   
chr2_85795087_C_Gchr2:85795087-4,480-1,440-2,816—   
chr2_85795095_G_Tchr2:857950954,4801,488768—   
chr2_85795099_T_Cchr2:85795099-4,480-1,600-1,664—   
chr2_85795132_C_Tchr2:85795132-4,416-864-2,688—   
chr2_85795092_G_Tchr2:85795092-4,352-1,360-2,560—   
chr2_85796486_T_Gchr2:857964864,352163,072—   
chr2_85799492_A_Tchr2:857994924,3521,2161,792—   
chr2_85799500_C_Gchr2:85799500-4,352-1,088-1,280—   
chr2_85795155_T_Gchr2:85795155-4,288-1,056-1,152—   
chr2_85799460_T_Gchr2:85799460-4,224-640-7,424—   
chr2_85795074_G_Achr2:85795074-4,224-960-3,072—   
chr2_85795094_T_Cchr2:857950944,1608963,584—   
chr2_85795110_A_Gchr2:857951104,1601,3923,968—   
chr2_85799455_G_Cchr2:857994554,0961,3444,352—   
chr2_85795107_C_Tchr2:85795107-4,096-1,264-2,432—   
chr2_85796429_C_Achr2:85796429-4,096-80-1,920—   
chr2_85799469_C_Gchr2:857994694,0961,280-3,840—   
chr2_85795093_C_Tchr2:85795093-4,032-992-2,688—   
chr2_85795116_A_Cchr2:857951164,0321,1522,304—   
chr2_85795123_T_Gchr2:857951234,0329922,048—   
chr2_85795093_C_Achr2:85795093-3,968-896-3,456—   
chr2_85795117_C_Tchr2:857951173,9681,1041,280—   
chr2_85796394_C_Tchr2:857963943,9683681,408—   
chr2_85799486_A_Gchr2:85799486-3,968-1,4721,024—   
chr2_85799488_C_Achr2:85799488-3,968-1,536-2,304—   
chr2_85799490_G_Tchr2:85799490-3,968-1,408-3,072—   
chr2_85795123_T_Achr2:857951233,9041,0242,176—   
chr2_85795192_C_Gchr2:857951923,9041,2483,712—   
chr2_85795111_T_Achr2:85795111-3,840-1,040-1,792—   
chr2_85796374_C_Gchr2:857963743,8402723,456—   
chr2_85796472_A_Tchr2:857964723,840288-512—   
chr2_85799468_G_Tchr2:85799468-3,840-1,152-2,560—   
chr2_85799474_G_Tchr2:857994743,8401,7283,584—   
chr2_85795079_G_Tchr2:85795079-3,776-752-3,456—   
chr2_85795115_A_Gchr2:85795115-3,776-1,312-1,408—   
chr2_85795073_T_Gchr2:857950733,5209283,840—   
chr2_85799460_T_Cchr2:857994603,3281,0243,840—   
chr2_85796359_C_Achr2:85796359-2,752-112-4,224—   
chr2_85796377_C_Gchr2:857963772,624964,480—   
chr2_85796376_C_Gchr2:857963762,304805,760—   
chr2_85796376_C_Tchr2:857963762,2402404,608—   
chr2_85795166_C_Tchr2:85795166-1,9204323,968—   
chr2_85796376_C_Achr2:857963761,6642725,120—   
chr2_85796442_A_Cchr2:85796442-1,6641924,096—   
chr2_85796375_C_Gchr2:857963751,600-164,992—   
chr2_85795180_T_Achr2:857951801,4721,4084,096—   
chr2_85795138_C_Tchr2:85795138-1,344-608-4,736—   
chr2_85795175_A_Tchr2:85795175-1,1521,9205,760—   

Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.