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ST3GAL5-AS1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near ST3GAL5-AS1

chr2:85,789,279..85,992,252, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant Position PXR FXR AhR AF
chr2_85799476_G_Cchr2:857994761.0001.0001.000—   
chr2_85799479_C_Gchr2:857994790.8450.8170.671—   
chr2_85799476_G_Achr2:857994760.7650.5890.565—   
chr2_85799479_C_Tchr2:857994790.7190.6900.494—   
chr2_85799478_T_Achr2:857994780.7120.7110.494—   
chr2_85799477_G_Cchr2:857994770.6660.5330.541—   
chr2_85799475_G_Cchr2:857994750.6390.4870.565—   
chr2_85799480_T_Achr2:857994800.5760.6240.424—   
chr2_85795122_C_Gchr2:857951220.5640.4950.459—   
chr2_85799478_T_Cchr2:857994780.5590.5480.553—   
chr2_85799477_G_Tchr2:857994770.5460.4620.412—   
chr2_85799476_G_Tchr2:857994760.4990.3350.376—   
chr2_85795187_C_Achr2:857951870.4980.4750.482—   
chr2_85799477_G_Achr2:857994770.4860.4010.376—   
chr2_85799475_G_Achr2:857994750.4590.3810.341—   
chr2_85795122_C_Tchr2:857951220.4410.3760.341—   
chr2_85795145_A_Tchr2:857951450.3830.3870.406—   
chr2_85799479_C_Achr2:857994790.3790.3860.247—   
chr2_85799467_G_Tchr2:85799467-0.366-0.360-0.306—   
chr2_85799475_G_Tchr2:857994750.3590.3100.318—   
chr2_85795120_C_Gchr2:857951200.3310.3170.312—   
chr2_85799474_G_Cchr2:857994740.3190.3200.341—   
chr2_85795121_C_Gchr2:857951210.3110.2390.306—   
chr2_85795124_C_Gchr2:857951240.3090.2650.324—   
chr2_85799466_A_Gchr2:85799466-0.156-0.132-0.541—   
chr2_85799480_T_Gchr2:857994800.3030.2940.341—   
chr2_85795121_C_Achr2:857951210.3010.2390.294—   
chr2_85795100_T_Achr2:85795100-0.296-0.266-0.282—   
chr2_85795119_C_Gchr2:857951190.2900.2690.353—   
chr2_85795121_C_Tchr2:857951210.2900.2230.282—   
chr2_85795084_G_Cchr2:85795084-0.285-0.231-0.400—   
chr2_85799461_G_Achr2:85799461-0.273-0.279-0.165—   
chr2_85795082_C_Gchr2:85795082-0.271-0.234-0.271—   
chr2_85795095_G_Achr2:857950950.2680.2550.241—   
chr2_85799467_G_Achr2:85799467-0.263-0.269-0.212—   
chr2_85795108_A_Tchr2:85795108-0.256-0.221-0.247—   
chr2_85796389_T_Cchr2:857963890.2510.1040.453—   
chr2_85795100_T_Cchr2:85795100-0.250-0.232-0.229—   
chr2_85795120_C_Achr2:857951200.2500.2660.324—   
chr2_85795124_C_Achr2:857951240.2500.2270.294—   
chr2_85799467_G_Cchr2:85799467-0.250-0.269-0.153—   
chr2_85795120_C_Tchr2:857951200.2460.1890.218—   
chr2_85799459_G_Achr2:85799459-0.243-0.259-0.212—   
chr2_85795100_T_Gchr2:85795100-0.241-0.223-0.165—   
chr2_85795082_C_Tchr2:85795082-0.240-0.207-0.312—   
chr2_85795106_T_Gchr2:85795106-0.240-0.226-0.188—   
chr2_85799486_A_Tchr2:85799486-0.240-0.254-0.165—   
chr2_85795097_G_Achr2:857950970.2380.1800.206—   
chr2_85795187_C_Gchr2:857951870.2380.2110.294—   
chr2_85795101_C_Achr2:857951010.2360.2820.241—   
chr2_85795084_G_Achr2:85795084-0.233-0.195-0.312—   
chr2_85795174_A_Cchr2:857951740.1610.2830.412—   
chr2_85799464_G_Cchr2:85799464-0.233-0.234-0.059—   
chr2_85795158_A_Cchr2:85795158-0.230-0.179-0.135—   
chr2_85799481_T_Achr2:857994810.2300.1730.141—   
chr2_85795147_A_Gchr2:857951470.2130.0960.394—   
chr2_85799461_G_Cchr2:85799461-0.223-0.274-0.106—   
chr2_85799459_G_Cchr2:85799459-0.216-0.203-0.071—   
chr2_85799462_G_Achr2:85799462-0.213-0.198-0.071—   
chr2_85799481_T_Gchr2:857994810.2100.1570.235—   
chr2_85795098_G_Cchr2:85795098-0.206-0.222-0.176—   
chr2_85799483_T_Cchr2:857994830.2060.1370.224—   
chr2_85799459_G_Tchr2:85799459-0.203-0.228-0.165—   
chr2_85799464_G_Achr2:85799464-0.200-0.208-0.141—   
chr2_85795098_G_Achr2:85795098-0.196-0.201-0.224—   
chr2_85795098_G_Tchr2:85795098-0.196-0.201-0.253—   
chr2_85799502_A_Gchr2:857995020.1960.2230.224—   
chr2_85796479_C_Tchr2:857964790.1950.0290.206—   
chr2_85799460_T_Gchr2:85799460-0.110-0.051-0.341—   
chr2_85799501_C_Gchr2:857995010.1930.1880.118—   
chr2_85799501_C_Tchr2:857995010.1930.2280.071—   
chr2_85795119_C_Tchr2:857951190.1900.1650.200—   
chr2_85799464_G_Tchr2:85799464-0.190-0.152-0.141—   
chr2_85799468_G_Achr2:85799468-0.186-0.208-0.247—   
chr2_85799505_T_Achr2:85799505-0.186-0.157-0.094—   
chr2_85795108_A_Gchr2:85795108-0.183-0.169-0.141—   
chr2_85795145_A_Cchr2:857951450.1680.1660.318—   
chr2_85795162_T_Cchr2:85795162-0.180-0.160-0.106—   
chr2_85799478_T_Gchr2:857994780.1800.1880.059—   
chr2_85799501_C_Achr2:857995010.1800.1930.094—   
chr2_85795093_C_Gchr2:85795093-0.176-0.137-0.188—   
chr2_85799470_A_Cchr2:85799470-0.176-0.122-0.106—   
chr2_85799462_G_Tchr2:85799462-0.173-0.1570.012—   
chr2_85796367_T_Gchr2:857963670.1250.0510.300—   
chr2_85795086_C_Achr2:85795086-0.166-0.162-0.176—   
chr2_85799499_C_Tchr2:85799499-0.166-0.142-0.118—   
chr2_85799509_A_Cchr2:85799509-0.166-0.122-0.094—   
chr2_85795102_A_Gchr2:85795102-0.165-0.152-0.129—   
chr2_85795106_T_Achr2:85795106-0.165-0.187-0.165—   
chr2_85795102_A_Tchr2:85795102-0.163-0.165-0.147—   
chr2_85799470_A_Gchr2:857994700.1630.1830.153—   
chr2_85799482_T_Achr2:857994820.1630.0810.082—   
chr2_85795086_C_Tchr2:85795086-0.161-0.156-0.182—   
chr2_85795160_C_Tchr2:857951600.1610.1240.112—   
chr2_85796456_C_Gchr2:857964560.1610.0620.182—   
chr2_85799463_G_Tchr2:85799463-0.160-0.208-0.082—   
chr2_85799488_C_Tchr2:85799488-0.160-0.188-0.141—   
chr2_85799480_T_Cchr2:857994800.1560.1470.176—   
chr2_85799485_A_Cchr2:857994850.1560.1170.153—   
chr2_85795143_G_Cchr2:85795143-0.155-0.115-0.153—   
chr2_85795084_G_Tchr2:85795084-0.153-0.138-0.224—   
chr2_85795083_C_Gchr2:85795083-0.150-0.142-0.206—   
chr2_85795175_A_Tchr2:85795175-0.0300.1520.265—   
chr2_85796376_C_Gchr2:857963760.0600.0060.265—   
chr2_85799473_T_Cchr2:857994730.1500.1120.141—   
chr2_85799511_A_Cchr2:85799511-0.150-0.112-0.129—   
chr2_85795089_G_Cchr2:857950890.1480.1430.188—   
chr2_85795118_T_Gchr2:85795118-0.148-0.117-0.088—   
chr2_85795204_T_Gchr2:857952040.1460.0910.194—   
chr2_85799508_T_Gchr2:85799508-0.146-0.162-0.082—   
chr2_85799509_A_Tchr2:85799509-0.146-0.041-0.094—   
chr2_85795107_C_Gchr2:85795107-0.143-0.129-0.141—   
chr2_85796371_G_Cchr2:857963710.1430.0630.176—   
chr2_85799463_G_Achr2:85799463-0.143-0.162-0.082—   
chr2_85795107_C_Achr2:85795107-0.141-0.133-0.176—   
chr2_85795085_C_Achr2:85795085-0.140-0.118-0.188—   
chr2_85795118_T_Cchr2:85795118-0.140-0.107-0.147—   
chr2_85799506_C_Tchr2:85799506-0.140-0.132-0.153—   
chr2_85795101_C_Tchr2:85795101-0.136-0.124-0.153—   
chr2_85795106_T_Cchr2:85795106-0.136-0.166-0.082—   
chr2_85799462_G_Cchr2:85799462-0.136-0.1780.071—   
chr2_85799503_T_Gchr2:857995030.1360.1680.188—   
chr2_85795083_C_Achr2:85795083-0.135-0.129-0.176—   
chr2_85795086_C_Gchr2:85795086-0.135-0.143-0.112—   
chr2_85795081_C_Gchr2:85795081-0.133-0.105-0.153—   
chr2_85795095_G_Cchr2:857950950.1330.1210.065—   
chr2_85796376_C_Achr2:857963760.0430.0220.235—   
chr2_85799491_C_Gchr2:857994910.1330.1370.106—   
chr2_85799509_A_Gchr2:85799509-0.133-0.122-0.035—   
chr2_85795096_G_Achr2:857950960.1310.1150.088—   
chr2_85795104_G_Cchr2:85795104-0.131-0.113-0.112—   
chr2_85795085_C_Tchr2:85795085-0.130-0.108-0.194—   
chr2_85795103_G_Achr2:857951030.1300.1690.047—   
chr2_85795110_A_Cchr2:85795110-0.130-0.117-0.082—   
chr2_85796375_C_Gchr2:857963750.042-0.0010.229—   
chr2_85799465_G_Cchr2:857994650.1300.0610.141—   
chr2_85799485_A_Gchr2:857994850.1300.0760.165—   
chr2_85799499_C_Achr2:85799499-0.130-0.117-0.094—   
chr2_85795074_G_Tchr2:85795074-0.128-0.066-0.171—   
chr2_85795083_C_Tchr2:85795083-0.128-0.110-0.165—   
chr2_85795102_A_Cchr2:85795102-0.128-0.110-0.100—   
chr2_85796392_C_Achr2:857963920.1280.0460.135—   
chr2_85795089_G_Tchr2:857950890.1260.1140.147—   
chr2_85795124_C_Tchr2:857951240.1260.0960.141—   
chr2_85795191_T_Gchr2:857951910.1260.1000.153—   
chr2_85799474_G_Achr2:857994740.1260.1570.129—   
chr2_85799510_T_Achr2:857995100.1260.1880.106—   
chr2_85795087_C_Achr2:85795087-0.125-0.108-0.153—   
chr2_85795126_C_Achr2:85795126-0.125-0.084-0.112—   
chr2_85795078_T_Achr2:857950780.1230.0950.147—   
chr2_85795138_C_Tchr2:85795138-0.035-0.048-0.218—   
chr2_85799461_G_Tchr2:85799461-0.123-0.168-0.082—   
chr2_85795081_C_Achr2:85795081-0.121-0.096-0.194—   
chr2_85795085_C_Gchr2:85795085-0.121-0.109-0.153—   
chr2_85795119_C_Achr2:857951190.1200.1130.159—   
chr2_85796376_C_Tchr2:857963760.0580.0190.212—   
chr2_85799457_G_Tchr2:85799457-0.120-0.264-0.106—   
chr2_85799493_C_Achr2:85799493-0.120-0.147-0.176—   
chr2_85795204_T_Achr2:857952040.1180.0940.147—   
chr2_85795087_C_Gchr2:85795087-0.116-0.114-0.129—   
chr2_85795095_G_Tchr2:857950950.1160.1180.035—   
chr2_85795099_T_Cchr2:85795099-0.116-0.127-0.076—   
chr2_85796377_C_Gchr2:857963770.0680.0080.206—   
chr2_85795132_C_Tchr2:85795132-0.115-0.069-0.124—   
chr2_85795092_G_Tchr2:85795092-0.113-0.108-0.118—   
chr2_85796486_T_Gchr2:857964860.1130.0010.141—   
chr2_85799455_G_Cchr2:857994550.1060.1070.200—   
chr2_85799492_A_Tchr2:857994920.1130.0960.082—   
chr2_85799500_C_Gchr2:85799500-0.113-0.086-0.059—   
chr2_85795155_T_Gchr2:85795155-0.111-0.084-0.053—   
chr2_85795074_G_Achr2:85795074-0.110-0.076-0.141—   
chr2_85796359_C_Achr2:85796359-0.072-0.009-0.194—   
chr2_85795094_T_Cchr2:857950940.1080.0710.165—   
chr2_85795110_A_Gchr2:857951100.1080.1100.182—   
chr2_85795107_C_Tchr2:85795107-0.106-0.100-0.112—   
chr2_85795180_T_Achr2:857951800.0380.1120.188—   
chr2_85796429_C_Achr2:85796429-0.106-0.006-0.088—   
chr2_85796442_A_Cchr2:85796442-0.0430.0150.188—   
chr2_85799469_C_Gchr2:857994690.1060.102-0.176—   
chr2_85795093_C_Tchr2:85795093-0.105-0.079-0.124—   
chr2_85795116_A_Cchr2:857951160.1050.0910.106—   
chr2_85795123_T_Gchr2:857951230.1050.0790.094—   
chr2_85795093_C_Achr2:85795093-0.103-0.071-0.159—   
chr2_85795117_C_Tchr2:857951170.1030.0880.059—   
chr2_85795166_C_Tchr2:85795166-0.0500.0340.182—   
chr2_85796394_C_Tchr2:857963940.1030.0290.065—   
chr2_85799486_A_Gchr2:85799486-0.103-0.1170.047—   
chr2_85799488_C_Achr2:85799488-0.103-0.122-0.106—   
chr2_85799490_G_Tchr2:85799490-0.103-0.112-0.141—   
chr2_85795123_T_Achr2:857951230.1010.0810.100—   
chr2_85795192_C_Gchr2:857951920.1010.0990.171—   
chr2_85795073_T_Gchr2:857950730.0920.0740.176—   
chr2_85795111_T_Achr2:85795111-0.100-0.082-0.082—   
chr2_85796374_C_Gchr2:857963740.1000.0220.159—   
chr2_85796472_A_Tchr2:857964720.1000.023-0.024—   
chr2_85799460_T_Cchr2:857994600.0870.0810.176—   
chr2_85799468_G_Tchr2:85799468-0.100-0.091-0.118—   
chr2_85799474_G_Tchr2:857994740.1000.1370.165—   
chr2_85795079_G_Tchr2:85795079-0.098-0.060-0.159—   
chr2_85795115_A_Gchr2:85795115-0.098-0.104-0.065—   

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.