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TERT
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near TERT
chr5:1,153,147..1,395,068, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr5_1174598_G_A | chr5:1174598 | -1.000 | -0.593 | -1.000 | <0.001% |
| chr5_1168252_A_C | chr5:1168252 | 1.000 | 0.904 | 1.000 | <0.001% |
| chr5_1168331_G_C | chr5:1168331 | -1.000 | -0.887 | -1.000 | <0.001% |
| chr5_1168322_C_T | chr5:1168322 | -1.000 | -0.901 | -1.000 | 0.056% |
| chr5_1174594_T_C | chr5:1174594 | -1.000 | -0.518 | -1.000 | <0.001% |
| chr5_1167865_G_A | chr5:1167865 | -1.000 | -0.645 | -1.000 | 0.0039% |
| chr5_1167864_G_A | chr5:1167864 | -1.000 | -0.679 | -1.000 | 0.0013% |
| chr5_1167862_G_T | chr5:1167862 | -1.000 | -0.522 | -1.000 | <0.001% |
| chr5_1174538_T_A | chr5:1174538 | 0.992 | 0.242 | 1.000 | 0.0013% |
| chr5_1161343_A_T | chr5:1161343 | -0.298 | -0.487 | -1.000 | 0.079% |
| chr5_1174595_G_C | chr5:1174595 | -0.822 | -0.287 | -1.000 | 0.305% |
| chr5_1174520_T_C | chr5:1174520 | -0.789 | -0.165 | -1.000 | <0.001% |
| chr5_1162139_C_A | chr5:1162139 | -0.762 | -0.581 | -1.000 | <0.001% |
| chr5_1162040_G_C | chr5:1162040 | -0.750 | -0.706 | -1.000 | <0.001% |
| chr5_1167851_A_T | chr5:1167851 | -0.759 | -0.282 | -0.976 | <0.001% |
| chr5_1174518_A_G | chr5:1174518 | -0.757 | -0.201 | -1.000 | 0.448% |
| chr5_1161346_C_T | chr5:1161346 | -0.174 | -0.416 | -1.000 | 0.0013% |
| chr5_1174522_A_C | chr5:1174522 | -0.691 | -0.197 | -1.000 | <0.001% |
| chr5_1162129_T_C | chr5:1162129 | -0.687 | -0.510 | -1.000 | 0.0013% |
| chr5_1162121_C_T | chr5:1162121 | -0.671 | -0.544 | -1.000 | <0.001% |
| chr5_1181611_C_T | chr5:1181611 | 0.654 | 0.901 | 0.729 | — |
| chr5_1167947_C_G | chr5:1167947 | 0.170 | 0.071 | 1.000 | 0.0020% |
| chr5_1162105_G_A | chr5:1162105 | 0.619 | 0.431 | 0.729 | 0.0013% |
| chr5_1174520_T_A | chr5:1174520 | -0.596 | -0.138 | -0.900 | 0.041% |
| chr5_1162029_C_T | chr5:1162029 | -0.592 | -0.574 | -0.900 | 0.034% |
| chr5_1174614_G_C | chr5:1174614 | -0.577 | -0.133 | -0.712 | 0.0039% |
| chr5_1162109_C_A | chr5:1162109 | -0.574 | -0.421 | -0.959 | <0.001% |
| chr5_1167863_C_T | chr5:1167863 | 0.537 | 0.175 | 0.794 | <0.001% |
| chr5_1181608_G_C | chr5:1181608 | 0.381 | 0.537 | 0.900 | — |
| chr5_1162173_G_T | chr5:1162173 | -0.507 | -0.419 | -0.741 | 0.013% |
| chr5_1162037_C_T | chr5:1162037 | -0.499 | -0.415 | -0.688 | 0.0053% |
| chr5_1168336_G_A | chr5:1168336 | -0.496 | -0.103 | -0.453 | 0.0026% |
| chr5_1168235_C_T | chr5:1168235 | -0.454 | -0.249 | -0.871 | <0.001% |
| chr5_1162097_C_T | chr5:1162097 | 0.483 | 0.340 | 0.682 | 0.0026% |
| chr5_1168176_A_T | chr5:1168176 | 0.476 | 0.272 | 0.518 | 0.0033% |
| chr5_1168333_G_A | chr5:1168333 | -0.471 | -0.066 | -0.818 | <0.001% |
| chr5_1162124_G_C | chr5:1162124 | -0.466 | -0.220 | -0.412 | <0.001% |
| chr5_1174544_C_A | chr5:1174544 | -0.451 | -0.126 | -0.641 | <0.001% |
| chr5_1161369_A_C | chr5:1161369 | -0.211 | -0.244 | -0.794 | <0.001% |
| chr5_1181612_C_A | chr5:1181612 | 0.414 | 0.585 | 0.459 | — |
| chr5_1167911_G_T | chr5:1167911 | -0.406 | -0.211 | -0.653 | <0.001% |
| chr5_1162038_G_A | chr5:1162038 | 0.033 | 0.203 | 0.682 | 0.0013% |
| chr5_1168156_A_G | chr5:1168156 | 0.386 | 0.259 | 0.541 | 1.18% |
| chr5_1168243_C_T | chr5:1168243 | -0.386 | -0.241 | -0.541 | 0.0013% |
| chr5_1162100_C_T | chr5:1162100 | -0.379 | -0.241 | -0.594 | 0.0039% |
| chr5_1174572_C_T | chr5:1174572 | 0.378 | 0.034 | 0.329 | 0.0013% |
| chr5_1167951_A_G | chr5:1167951 | 0.300 | 0.218 | 0.659 | <0.001% |
| chr5_1167911_G_C | chr5:1167911 | -0.364 | -0.162 | -0.512 | 0.047% |
| chr5_1162142_G_C | chr5:1162142 | -0.266 | -0.263 | -0.606 | <0.001% |
| chr5_1181619_G_C | chr5:1181619 | 0.343 | 0.308 | 0.471 | — |
| chr5_1181608_G_A | chr5:1181608 | 0.339 | 0.398 | 0.535 | — |
| chr5_1162088_A_G | chr5:1162088 | -0.334 | -0.274 | -0.382 | <0.001% |
| chr5_1168259_C_T | chr5:1168259 | -0.158 | -0.112 | -0.588 | 0.011% |
| chr5_1162125_C_A | chr5:1162125 | 0.329 | 0.249 | 0.500 | 0.0067% |
| chr5_1168415_C_T | chr5:1168415 | 0.329 | 0.082 | 0.482 | 0.0020% |
| chr5_1162185_C_A | chr5:1162185 | 0.326 | 0.259 | 0.353 | <0.001% |
| chr5_1168414_G_A | chr5:1168414 | 0.326 | 0.085 | 0.418 | 0.0033% |
| chr5_1168334_C_A | chr5:1168334 | -0.318 | -0.049 | -0.559 | <0.001% |
| chr5_1181643_G_C | chr5:1181643 | 0.311 | 0.608 | 0.424 | — |
| chr5_1168260_G_A | chr5:1168260 | -0.205 | -0.175 | -0.547 | <0.001% |
| chr5_1155999_G_A | chr5:1155999 | 0.111 | 0.103 | 0.533 | 0.0020% |
| chr5_1161981_G_A | chr5:1161981 | 0.300 | 0.418 | 0.459 | 0.016% |
| chr5_1168213_C_T | chr5:1168213 | -0.298 | -0.170 | -0.276 | 0.0026% |
| chr5_1181612_C_G | chr5:1181612 | 0.290 | 0.373 | 0.341 | — |
| chr5_1161989_C_T | chr5:1161989 | 0.286 | 0.242 | 0.400 | 0.014% |
| chr5_1162167_G_T | chr5:1162167 | -0.285 | -0.247 | -0.476 | <0.001% |
| chr5_1168285_T_G | chr5:1168285 | -0.241 | -0.056 | -0.500 | <0.001% |
| chr5_1174494_G_T | chr5:1174494 | -0.186 | 0.024 | -0.488 | <0.001% |
| chr5_1174494_G_A | chr5:1174494 | -0.163 | 0.022 | -0.482 | 0.0079% |
| chr5_1167945_A_C | chr5:1167945 | -0.271 | -0.056 | 0.035 | <0.001% |
| chr5_1167941_G_A | chr5:1167941 | -0.078 | -0.127 | -0.476 | 0.0039% |
| chr5_1168268_A_G | chr5:1168268 | 0.135 | 0.003 | 0.476 | <0.001% |
| chr5_1174564_A_G | chr5:1174564 | -0.266 | -0.056 | -0.229 | <0.001% |
| chr5_1181619_G_A | chr5:1181619 | 0.266 | 0.286 | 0.259 | — |
| chr5_1181617_T_C | chr5:1181617 | 0.265 | 0.294 | 0.400 | — |
| chr5_1168197_C_A | chr5:1168197 | -0.133 | -0.107 | -0.465 | 0.0013% |
| chr5_1181607_G_T | chr5:1181607 | 0.256 | 0.339 | 0.388 | — |
| chr5_1181605_C_G | chr5:1181605 | -0.235 | -0.245 | -0.447 | — |
| chr5_1162008_A_C | chr5:1162008 | -0.248 | -0.176 | -0.188 | 0.0059% |
| chr5_1181609_G_C | chr5:1181609 | 0.248 | 0.190 | 0.335 | — |
| chr5_1168143_G_C | chr5:1168143 | 0.067 | 0.129 | 0.435 | <0.001% |
| chr5_1181606_A_C | chr5:1181606 | -0.132 | -0.209 | -0.435 | — |
| chr5_1181642_A_G | chr5:1181642 | 0.245 | 0.263 | 0.200 | — |
| chr5_1162101_G_A | chr5:1162101 | 0.241 | 0.221 | 0.376 | 0.0020% |
| chr5_1174670_T_C | chr5:1174670 | -0.241 | -0.027 | -0.147 | 0.0013% |
| chr5_1161324_C_T | chr5:1161324 | -0.113 | -0.127 | -0.418 | 0.011% |
| chr5_1162122_C_T | chr5:1162122 | -0.183 | -0.098 | -0.418 | 0.0027% |
| chr5_1181606_A_T | chr5:1181606 | -0.131 | -0.174 | -0.418 | — |
| chr5_1174534_C_A | chr5:1174534 | -0.233 | -0.051 | -0.329 | 0.0026% |
| chr5_1167841_A_T | chr5:1167841 | -0.230 | -0.066 | -0.224 | <0.001% |
| chr5_1174601_C_G | chr5:1174601 | -0.228 | -0.041 | -0.235 | <0.001% |
| chr5_1181605_C_T | chr5:1181605 | -0.205 | -0.234 | -0.400 | — |
| chr5_1181606_A_G | chr5:1181606 | -0.156 | -0.197 | -0.400 | 1.18% |
| chr5_1181629_T_A | chr5:1181629 | 0.226 | 0.202 | 0.259 | — |
| chr5_1168415_C_G | chr5:1168415 | 0.225 | 0.102 | 0.229 | 0.0013% |
| chr5_1174507_T_C | chr5:1174507 | 0.225 | 0.077 | 0.153 | <0.001% |
| chr5_1174545_G_A | chr5:1174545 | 0.225 | 0.033 | 0.165 | <0.001% |
| chr5_1162093_C_T | chr5:1162093 | 0.165 | 0.181 | 0.394 | <0.001% |
| chr5_1161976_T_G | chr5:1161976 | 0.221 | 0.308 | 0.365 | 0.0013% |
| chr5_1174545_G_T | chr5:1174545 | 0.221 | 0.013 | 0.200 | 0.0013% |
| chr5_1168416_G_T | chr5:1168416 | 0.220 | 0.037 | 0.147 | <0.001% |
| chr5_1174431_T_C | chr5:1174431 | -0.201 | -0.084 | -0.388 | <0.001% |
| chr5_1174534_C_T | chr5:1174534 | -0.218 | -0.037 | -0.324 | 0.0072% |
| chr5_1162154_C_T | chr5:1162154 | 0.216 | 0.132 | 0.371 | 0.0020% |
| chr5_1155218_G_C | chr5:1155218 | 0.012 | 0.027 | 0.379 | <0.001% |
| chr5_1161349_C_T | chr5:1161349 | -0.022 | -0.067 | -0.376 | 0.0072% |
| chr5_1161555_A_C | chr5:1161555 | 0.023 | 0.048 | 0.376 | <0.001% |
| chr5_1162013_G_A | chr5:1162013 | -0.211 | -0.171 | -0.259 | 0.033% |
| chr5_1161335_T_A | chr5:1161335 | -0.208 | -0.341 | -0.341 | <0.001% |
| chr5_1181624_G_A | chr5:1181624 | 0.208 | 0.412 | 0.365 | — |
| chr5_1161349_C_A | chr5:1161349 | -0.017 | -0.043 | -0.365 | 0.0020% |
| chr5_1161960_C_T | chr5:1161960 | -0.198 | -0.223 | -0.365 | 0.0046% |
| chr5_1168253_A_T | chr5:1168253 | 0.205 | -0.041 | -0.118 | <0.001% |
| chr5_1181641_C_G | chr5:1181641 | 0.203 | 0.255 | 0.224 | — |
| chr5_1155945_G_A | chr5:1155945 | 0.046 | 0.098 | 0.358 | <0.001% |
| chr5_1162058_G_A | chr5:1162058 | -0.183 | -0.232 | -0.353 | 0.0013% |
| chr5_1162098_G_A | chr5:1162098 | 0.200 | 0.129 | 0.224 | 0.024% |
| chr5_1161311_C_T | chr5:1161311 | 0.000 | 0.195 | 0.341 | 0.269% |
| chr5_1161316_C_A | chr5:1161316 | 0.082 | 0.016 | -0.341 | 0.0046% |
| chr5_1167909_G_A | chr5:1167909 | -0.193 | -0.061 | -0.247 | <0.001% |
| chr5_1181607_G_C | chr5:1181607 | 0.193 | 0.217 | 0.282 | — |
| chr5_1161192_G_A | chr5:1161192 | 0.086 | 0.164 | 0.335 | 0.0085% |
| chr5_1181622_T_G | chr5:1181622 | 0.190 | 0.269 | 0.224 | — |
| chr5_1161197_G_A | chr5:1161197 | 0.096 | 0.161 | 0.329 | 0.033% |
| chr5_1161981_G_T | chr5:1161981 | 0.131 | 0.160 | 0.329 | 0.0026% |
| chr5_1168413_C_T | chr5:1168413 | 0.181 | 0.071 | 0.159 | 0.0039% |
| chr5_1174528_T_C | chr5:1174528 | 0.181 | 0.028 | 0.229 | 0.0013% |
| chr5_1162104_G_A | chr5:1162104 | 0.178 | 0.162 | 0.282 | <0.001% |
| chr5_1174459_G_C | chr5:1174459 | -0.178 | -0.055 | -0.271 | <0.001% |
| chr5_1162063_G_C | chr5:1162063 | -0.176 | -0.230 | -0.235 | 0.591% |
| chr5_1174479_A_G | chr5:1174479 | -0.176 | -0.047 | 0.235 | 0.0026% |
| chr5_1168177_T_C | chr5:1168177 | 0.175 | 0.096 | 0.118 | <0.001% |
| chr5_1174614_G_A | chr5:1174614 | -0.175 | -0.037 | -0.212 | 0.0026% |
| chr5_1181628_C_G | chr5:1181628 | 0.175 | 0.164 | 0.200 | — |
| chr5_1161393_C_G | chr5:1161393 | 0.065 | 0.107 | 0.306 | 0.0079% |
| chr5_1167942_T_C | chr5:1167942 | -0.173 | -0.069 | -0.024 | 0.0013% |
| chr5_1168130_G_A | chr5:1168130 | -0.100 | -0.071 | -0.306 | <0.001% |
| chr5_1162167_G_C | chr5:1162167 | -0.171 | -0.131 | -0.212 | <0.001% |
| chr5_1168337_C_G | chr5:1168337 | -0.171 | -0.025 | -0.159 | <0.001% |
| chr5_1155342_C_A | chr5:1155342 | 0.023 | 0.063 | 0.299 | 0.0013% |
| chr5_1161382_T_C | chr5:1161382 | -0.053 | -0.201 | -0.294 | 0.0020% |
| chr5_1162052_G_A | chr5:1162052 | -0.166 | -0.142 | -0.259 | 0.0072% |
| chr5_1168197_C_T | chr5:1168197 | -0.085 | -0.048 | -0.294 | 0.0013% |
| chr5_1161302_C_A | chr5:1161302 | 0.165 | -0.047 | 0.094 | <0.001% |
| chr5_1161779_G_T | chr5:1161779 | 0.165 | 0.070 | 0.100 | 0.0013% |
| chr5_1161196_C_T | chr5:1161196 | 0.036 | 0.168 | 0.288 | 0.0066% |
| chr5_1155221_C_T | chr5:1155221 | 0.036 | 0.049 | 0.282 | <0.001% |
| chr5_1167821_C_T | chr5:1167821 | -0.160 | -0.090 | -0.206 | 0.0053% |
| chr5_1168220_T_A | chr5:1168220 | -0.048 | -0.048 | -0.282 | 0.0013% |
| chr5_1168236_G_A | chr5:1168236 | -0.065 | -0.058 | -0.282 | 0.0013% |
| chr5_1181610_T_G | chr5:1181610 | 0.148 | 0.216 | 0.282 | — |
| chr5_1167817_C_A | chr5:1167817 | -0.158 | -0.093 | -0.200 | 0.0039% |
| chr5_1161199_A_G | chr5:1161199 | 0.069 | 0.136 | 0.276 | <0.001% |
| chr5_1161370_C_A | chr5:1161370 | -0.060 | -0.082 | -0.276 | <0.001% |
| chr5_1156232_C_T | chr5:1156232 | 0.032 | 0.055 | 0.274 | <0.001% |
| chr5_1161371_C_G | chr5:1161371 | 0.088 | 0.049 | 0.271 | 0.0046% |
| chr5_1168136_A_G | chr5:1168136 | 0.080 | 0.056 | 0.271 | <0.001% |
| chr5_1167883_C_T | chr5:1167883 | -0.118 | -0.051 | -0.265 | 0.0020% |
| chr5_1168350_T_A | chr5:1168350 | -0.148 | -0.028 | -0.041 | 0.012% |
| chr5_1161253_G_A | chr5:1161253 | -0.027 | -0.055 | -0.259 | 0.0013% |
| chr5_1167999_G_C | chr5:1167999 | -0.058 | -0.069 | -0.259 | <0.001% |
| chr5_1168261_G_A | chr5:1168261 | -0.146 | -0.084 | -0.206 | <0.001% |
| chr5_1168266_G_C | chr5:1168266 | 0.146 | 0.005 | -0.194 | <0.001% |
| chr5_1155220_C_T | chr5:1155220 | 0.040 | 0.041 | 0.256 | 0.0020% |
| chr5_1168416_G_A | chr5:1168416 | 0.145 | 0.027 | 0.088 | 0.0053% |
| chr5_1174334_C_T | chr5:1174334 | 0.145 | 0.084 | 0.076 | 0.0046% |
| chr5_1155600_C_T | chr5:1155600 | 0.040 | 0.048 | 0.253 | 0.0020% |
| chr5_1161642_A_C | chr5:1161642 | 0.072 | -0.005 | 0.253 | 0.0099% |
| chr5_1168302_G_A | chr5:1168302 | -0.133 | -0.089 | -0.253 | 0.0013% |
| chr5_1174584_G_C | chr5:1174584 | -0.143 | -0.027 | -0.124 | <0.001% |
| chr5_1174655_C_T | chr5:1174655 | -0.141 | -0.042 | -0.153 | 0.0013% |
| chr5_1161549_C_G | chr5:1161549 | 0.055 | 0.011 | 0.247 | <0.001% |
| chr5_1168424_C_G | chr5:1168424 | 0.140 | 0.066 | 0.200 | <0.001% |
| chr5_1181642_A_C | chr5:1181642 | 0.140 | 0.155 | 0.118 | — |
| chr5_1181642_A_T | chr5:1181642 | 0.140 | 0.136 | 0.106 | — |
| chr5_1155914_C_G | chr5:1155914 | -0.071 | -0.037 | -0.246 | <0.001% |
| chr5_1168415_C_A | chr5:1168415 | 0.138 | 0.051 | 0.082 | 0.196% |
| chr5_1168190_C_T | chr5:1168190 | -0.136 | -0.069 | -0.212 | 0.012% |
| chr5_1155928_C_T | chr5:1155928 | -0.086 | -0.056 | -0.240 | 0.0014% |
| chr5_1162070_G_C | chr5:1162070 | 0.135 | 0.113 | 0.035 | 0.0020% |
| chr5_1162073_G_A | chr5:1162073 | -0.135 | -0.069 | -0.200 | <0.001% |
| chr5_1162220_C_T | chr5:1162220 | 0.135 | 0.062 | 0.065 | 0.0033% |
| chr5_1168004_G_C | chr5:1168004 | -0.135 | -0.069 | -0.129 | <0.001% |
| chr5_1155350_C_G | chr5:1155350 | 0.059 | 0.106 | 0.237 | <0.001% |
| chr5_1167828_A_G | chr5:1167828 | 0.133 | 0.057 | 0.112 | <0.001% |
| chr5_1168146_C_G | chr5:1168146 | 0.110 | 0.074 | 0.235 | 0.0020% |
| chr5_1168266_G_A | chr5:1168266 | 0.088 | -0.056 | -0.235 | 0.0013% |
| chr5_1181605_C_A | chr5:1181605 | -0.130 | -0.131 | -0.235 | — |
| chr5_1162165_G_A | chr5:1162165 | 0.130 | 0.108 | 0.135 | 0.0020% |
| chr5_1167804_G_A | chr5:1167804 | -0.038 | -0.008 | -0.229 | 0.0079% |
| chr5_1167825_C_A | chr5:1167825 | -0.103 | -0.110 | -0.229 | <0.001% |
| chr5_1181609_G_A | chr5:1181609 | 0.130 | 0.052 | 0.112 | — |
| chr5_1161332_A_G | chr5:1161332 | -0.128 | -0.235 | 0.118 | <0.001% |
| chr5_1168375_A_G | chr5:1168375 | 0.128 | 0.032 | 0.124 | <0.001% |
| chr5_1161315_G_A | chr5:1161315 | 0.005 | -0.033 | -0.224 | 0.022% |
| chr5_1162051_C_T | chr5:1162051 | 0.125 | 0.140 | 0.224 | 0.0085% |
| chr5_1167883_C_G | chr5:1167883 | -0.088 | -0.023 | -0.224 | 0.0013% |
| chr5_1174303_C_G | chr5:1174303 | -0.003 | 0.003 | 0.224 | 0.012% |
| chr5_1174493_C_T | chr5:1174493 | 0.003 | -0.005 | -0.224 | 0.0026% |
| chr5_1181609_G_T | chr5:1181609 | 0.126 | 0.077 | 0.159 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.