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TLCD3A
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near TLCD3A
chr17:632,545..842,968, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_714940_T_C | chr17:714940 | 16,896 | 4,352 | 32,256 | 6.6e-6 |
| chr17_714952_C_T | chr17:714952 | 15,296 | 2,752 | 19,456 | 1.3e-4 |
| chr17_714888_A_C | chr17:714888 | 14,592 | 3,296 | 6,912 | 2.0e-5 |
| chr17_714853_C_A | chr17:714853 | 13,056 | 0 | -5,120 | 1.3e-5 |
| chr17_714882_C_A | chr17:714882 | 12,032 | 2,272 | 6,656 | 6.6e-6 |
| chr17_714936_G_A | chr17:714936 | -11,136 | -1,120 | -13,312 | 1.3e-5 |
| chr17_714815_G_A | chr17:714815 | 10,496 | 3,488 | 6,400 | 2.0e-5 |
| chr17_714934_C_G | chr17:714934 | -10,368 | -320 | 10,752 | 6.6e-6 |
| chr17_714731_G_C | chr17:714731 | -10,112 | -4,704 | -27,648 | 6.6e-6 |
| chr17_714857_C_T | chr17:714857 | 9,856 | -1,536 | -12,032 | 6.6e-6 |
| chr17_714856_C_T | chr17:714856 | 9,472 | -800 | -9,984 | 6.6e-6 |
| chr17_714766_G_C | chr17:714766 | -8,896 | -960 | -9,216 | 6.6e-6 |
| chr17_714947_G_A | chr17:714947 | 8,320 | 1,280 | 13,312 | 6.6e-6 |
| chr17_715044_C_T | chr17:715044 | 8,256 | 992 | 7,168 | 3.3e-5 |
| chr17_714979_C_T | chr17:714979 | -8,128 | -1,952 | -9,216 | 1.2e-3 |
| chr17_714857_C_G | chr17:714857 | 7,936 | -2,336 | -15,360 | 6.6e-6 |
| chr17_714750_A_C | chr17:714750 | -7,808 | -1,504 | -10,496 | 2.6e-5 |
| chr17_714878_G_A | chr17:714878 | 7,808 | -864 | -8,192 | 1.3e-5 |
| chr17_714723_C_T | chr17:714723 | 7,744 | 2,720 | 17,152 | 6.6e-6 |
| chr17_714881_C_G | chr17:714881 | -7,552 | -448 | -5,632 | 6.6e-6 |
| chr17_714924_C_T | chr17:714924 | -7,552 | 576 | -512 | 6.6e-6 |
| chr17_715034_A_C | chr17:715034 | 7,264 | 1,376 | 6,912 | 6.6e-6 |
| chr17_714804_C_T | chr17:714804 | 7,168 | 2,976 | 6,144 | 2.0e-5 |
| chr17_714837_G_A | chr17:714837 | 7,040 | -96 | 0 | 1.5e-4 |
| chr17_715045_C_G | chr17:715045 | 7,008 | 704 | 3,584 | 6.6e-6 |
| chr17_714726_C_G | chr17:714726 | 6,976 | 1,920 | 14,848 | 6.6e-6 |
| chr17_714932_G_T | chr17:714932 | -6,592 | -992 | -11,776 | 1.3e-5 |
| chr17_714860_C_G | chr17:714860 | -6,528 | -224 | -2,560 | 6.0e-1 |
| chr17_714966_G_A | chr17:714966 | -6,080 | 544 | -768 | 6.8e-6 |
| chr17_714727_T_C | chr17:714727 | -5,888 | -2,688 | -17,152 | 6.6e-5 |
| chr17_714866_A_C | chr17:714866 | -5,632 | -1,280 | -6,656 | 6.6e-6 |
| chr17_714824_C_G | chr17:714824 | 5,632 | 480 | 4,352 | 2.6e-5 |
| chr17_714775_G_A | chr17:714775 | -5,504 | -288 | -4,352 | 6.6e-6 |
| chr17_715060_G_C | chr17:715060 | 5,408 | 32 | 3,584 | 6.6e-6 |
| chr17_714737_C_T | chr17:714737 | 5,056 | 2,240 | 12,032 | 6.6e-6 |
| chr17_714731_G_A | chr17:714731 | 4,864 | 544 | 3,328 | 6.6e-6 |
| chr17_715055_G_A | chr17:715055 | 4,864 | 896 | 3,328 | 1.3e-5 |
| chr17_714929_C_T | chr17:714929 | -4,672 | 576 | -6,656 | 1.3e-5 |
| chr17_714787_C_A | chr17:714787 | -4,672 | 64 | 768 | 3.3e-5 |
| chr17_714959_T_C | chr17:714959 | 4,608 | 1,600 | 6,400 | 6.6e-6 |
| chr17_714836_T_C | chr17:714836 | -4,352 | 416 | 1,536 | 2.6e-5 |
| chr17_652591_A_C | chr17:652591 | -4,320 | -672 | -3,520 | — |
| chr17_714925_C_T | chr17:714925 | -3,968 | 192 | -4,096 | 5.9e-5 |
| chr17_714829_G_A | chr17:714829 | 3,968 | 768 | -1,792 | 1.3e-5 |
| chr17_714890_T_C | chr17:714890 | 3,968 | 608 | 2,560 | 6.6e-5 |
| chr17_714876_C_G | chr17:714876 | 3,840 | -3,488 | -19,200 | 1.6e-3 |
| chr17_714946_G_T | chr17:714946 | -3,840 | 192 | -4,096 | 1.6e-2 |
| chr17_652548_A_C | chr17:652548 | -3,776 | 224 | -1,472 | — |
| chr17_714858_G_C | chr17:714858 | 3,712 | -2,368 | -9,216 | 2.6e-5 |
| chr17_714623_C_T | chr17:714623 | -3,712 | 96 | 256 | 2.0e-5 |
| chr17_714801_C_A | chr17:714801 | -3,712 | 768 | 1,024 | 7.2e-5 |
| chr17_714870_C_T | chr17:714870 | 3,712 | -224 | -3,584 | 6.6e-6 |
| chr17_652593_C_G | chr17:652593 | 3,648 | 224 | 3,200 | — |
| chr17_652624_C_T | chr17:652624 | -3,616 | -560 | -2,496 | — |
| chr17_714805_G_T | chr17:714805 | -3,584 | -1,824 | -9,728 | 6.6e-6 |
| chr17_714957_T_C | chr17:714957 | -3,456 | -3,264 | -15,872 | 6.6e-6 |
| chr17_714739_C_T | chr17:714739 | 3,456 | 1,984 | 9,472 | 6.6e-6 |
| chr17_714805_G_A | chr17:714805 | -3,456 | -1,760 | -4,352 | 1.3e-5 |
| chr17_714740_C_T | chr17:714740 | 3,200 | 2,272 | 12,800 | 6.6e-6 |
| chr17_652600_C_A | chr17:652600 | 3,104 | -624 | 2,432 | 1.3e-5 |
| chr17_714831_C_A | chr17:714831 | -3,072 | 832 | 4,096 | 6.6e-6 |
| chr17_714796_C_T | chr17:714796 | 3,008 | 672 | 768 | 2.0e-5 |
| chr17_715016_C_G | chr17:715016 | 2,944 | 768 | 3,584 | 1.3e-5 |
| chr17_652620_T_G | chr17:652620 | 2,784 | 288 | 7,680 | — |
| chr17_652519_T_G | chr17:652519 | 2,752 | -224 | 2,112 | 1.3e-5 |
| chr17_714913_C_G | chr17:714913 | -2,752 | -384 | 0 | 1.3e-5 |
| chr17_652523_G_T | chr17:652523 | -2,720 | -64 | -2,368 | — |
| chr17_714844_G_C | chr17:714844 | 2,688 | 672 | -256 | 6.6e-6 |
| chr17_652516_C_T | chr17:652516 | 2,656 | 848 | -1,728 | 6.6e-6 |
| chr17_714687_T_C | chr17:714687 | -2,560 | -352 | -3,072 | 6.6e-6 |
| chr17_714793_C_T | chr17:714793 | 2,560 | 704 | 768 | 6.6e-6 |
| chr17_714809_T_G | chr17:714809 | 2,432 | -1,120 | -3,328 | 1.3e-5 |
| chr17_714710_T_G | chr17:714710 | -2,432 | -384 | -2,304 | 6.9e-6 |
| chr17_714777_C_T | chr17:714777 | 2,432 | -64 | -768 | 6.6e-6 |
| chr17_714962_C_T | chr17:714962 | 2,432 | 256 | -1,792 | 6.6e-6 |
| chr17_714522_C_T | chr17:714522 | 2,368 | 1,024 | 6,400 | 2.6e-5 |
| chr17_652614_T_A | chr17:652614 | 2,336 | 384 | 2,240 | — |
| chr17_714812_T_C | chr17:714812 | 2,304 | -608 | -2,304 | 6.6e-6 |
| chr17_714820_G_A | chr17:714820 | -2,304 | 672 | 1,280 | 7.9e-5 |
| chr17_652580_T_G | chr17:652580 | 2,272 | 144 | 3,328 | — |
| chr17_652547_C_T | chr17:652547 | 2,208 | 1,040 | -1,024 | — |
| chr17_714810_G_A | chr17:714810 | 2,176 | 512 | 2,048 | 1.3e-5 |
| chr17_714983_G_A | chr17:714983 | -2,176 | 128 | -1,024 | 2.1e-5 |
| chr17_652573_G_A | chr17:652573 | -2,112 | 1,152 | -3,776 | — |
| chr17_652573_G_C | chr17:652573 | -2,048 | 1,024 | -3,200 | — |
| chr17_714796_C_A | chr17:714796 | 2,048 | 1,120 | 1,280 | 6.6e-6 |
| chr17_661648_A_T | chr17:661648 | 2,044 | 352 | 0 | — |
| chr17_652575_C_A | chr17:652575 | 1,984 | 608 | 1,472 | — |
| chr17_714911_G_A | chr17:714911 | 1,984 | 704 | 0 | 6.6e-6 |
| chr17_714966_G_T | chr17:714966 | -1,984 | -32 | 512 | 2.7e-5 |
| chr17_714712_C_T | chr17:714712 | 1,920 | 1,056 | 6,144 | 3.3e-5 |
| chr17_714886_G_A | chr17:714886 | 1,920 | 128 | 4,608 | 1.3e-5 |
| chr17_714825_G_C | chr17:714825 | -1,920 | -1,472 | -4,096 | 1.3e-5 |
| chr17_714972_G_C | chr17:714972 | -1,920 | 1,312 | -3,840 | 6.9e-6 |
| chr17_652589_A_G | chr17:652589 | 1,920 | -304 | 1,792 | — |
| chr17_652515_A_C | chr17:652515 | 1,856 | -512 | 1,920 | — |
| chr17_652583_C_A | chr17:652583 | 1,824 | 1,088 | 2,048 | — |
| chr17_714993_A_G | chr17:714993 | 1,792 | 1,056 | 4,864 | 3.1e-3 |
| chr17_652556_A_G | chr17:652556 | 1,792 | 112 | 2,112 | — |
| chr17_714526_C_T | chr17:714526 | 1,728 | 544 | 6,400 | 5.3e-5 |
| chr17_652627_A_T | chr17:652627 | -1,728 | 80 | -1,920 | — |
| chr17_714994_G_A | chr17:714994 | 1,600 | -256 | -2,816 | 3.1e-2 |
| chr17_714555_C_A | chr17:714555 | 1,536 | 544 | 7,424 | 6.6e-6 |
| chr17_714819_G_A | chr17:714819 | -1,536 | 832 | 3,584 | 1.3e-5 |
| chr17_652520_G_C | chr17:652520 | 1,504 | 512 | 2,112 | — |
| chr17_652581_C_T | chr17:652581 | -1,504 | 656 | -2,048 | — |
| chr17_652515_A_T | chr17:652515 | 1,472 | -384 | 2,304 | — |
| chr17_714548_G_C | chr17:714548 | -1,408 | -1,152 | -12,544 | 4.6e-5 |
| chr17_652571_T_C | chr17:652571 | -1,408 | 432 | -2,368 | — |
| chr17_652582_C_T | chr17:652582 | -1,344 | 800 | -2,560 | — |
| chr17_714909_G_A | chr17:714909 | 1,344 | -32 | -2,560 | 6.6e-6 |
| chr17_714548_G_A | chr17:714548 | 1,280 | -64 | -2,560 | 6.6e-6 |
| chr17_714974_G_A | chr17:714974 | 1,216 | -800 | -2,560 | 7.1e-6 |
| chr17_652598_A_G | chr17:652598 | 1,216 | -176 | 2,240 | 6.6e-6 |
| chr17_715030_C_T | chr17:715030 | 1,056 | 1,088 | 4,352 | 6.6e-6 |
| chr17_652590_C_T | chr17:652590 | 1,056 | 704 | -2,496 | — |
| chr17_652611_C_T | chr17:652611 | -1,056 | -48 | -2,176 | — |
| chr17_652511_C_A | chr17:652511 | -1,040 | -496 | -2,496 | — |
| chr17_714542_C_A | chr17:714542 | 1,024 | 672 | 4,864 | 3.9e-5 |
| chr17_714580_C_T | chr17:714580 | 1,024 | 416 | 4,352 | 7.2e-5 |
| chr17_652522_G_A | chr17:652522 | -1,024 | 256 | -2,048 | 3.5e-4 |
| chr17_714813_G_A | chr17:714813 | 1,024 | 352 | 2,048 | 6.6e-6 |
| chr17_652581_C_A | chr17:652581 | -992 | 1,312 | -2,048 | — |
| chr17_652610_G_C | chr17:652610 | -992 | 144 | -1,984 | 6.6e-6 |
| chr17_652573_G_T | chr17:652573 | -960 | 1,264 | -2,752 | — |
| chr17_652549_A_T | chr17:652549 | -960 | 1,152 | 1,984 | — |
| chr17_714757_C_T | chr17:714757 | -896 | -288 | -2,816 | 6.6e-6 |
| chr17_714540_C_T | chr17:714540 | 832 | 480 | 5,632 | 6.6e-6 |
| chr17_714757_C_A | chr17:714757 | -832 | -608 | -4,608 | 6.6e-6 |
| chr17_714901_G_T | chr17:714901 | -832 | -384 | -3,072 | 6.6e-6 |
| chr17_714591_C_G | chr17:714591 | 832 | 224 | 2,048 | 6.6e-6 |
| chr17_714506_T_C | chr17:714506 | 768 | -448 | -6,144 | 1.6e-4 |
| chr17_715008_T_A | chr17:715008 | -768 | 64 | 3,840 | 6.6e-6 |
| chr17_652526_G_T | chr17:652526 | -768 | -704 | -1,920 | — |
| chr17_652555_A_G | chr17:652555 | 736 | -304 | 2,496 | — |
| chr17_714946_G_C | chr17:714946 | 704 | 256 | 3,072 | 6.6e-6 |
| chr17_652580_T_C | chr17:652580 | -704 | 960 | -2,240 | — |
| chr17_652623_G_A | chr17:652623 | -704 | 576 | -2,112 | 1.8e-3 |
| chr17_652603_G_C | chr17:652603 | 704 | 384 | 1,984 | — |
| chr17_652605_A_T | chr17:652605 | -640 | 1,200 | 1,984 | 1.3e-5 |
| chr17_661529_A_T | chr17:661529 | 596 | 576 | 3,904 | — |
| chr17_661526_A_T | chr17:661526 | 588 | 496 | 3,968 | — |
| chr17_661528_A_T | chr17:661528 | 580 | 560 | 3,968 | — |
| chr17_714808_C_G | chr17:714808 | -576 | 416 | 4,608 | 6.6e-6 |
| chr17_661530_A_T | chr17:661530 | 524 | 512 | 3,392 | — |
| chr17_661528_A_C | chr17:661528 | 512 | 528 | 4,864 | — |
| chr17_652574_C_T | chr17:652574 | -512 | 1,760 | -2,368 | — |
| chr17_661528_A_G | chr17:661528 | 504 | 544 | 5,568 | — |
| chr17_661525_A_T | chr17:661525 | 488 | 480 | 3,328 | — |
| chr17_661527_A_G | chr17:661527 | 484 | 544 | 5,696 | — |
| chr17_661529_A_G | chr17:661529 | 484 | 544 | 5,568 | — |
| chr17_661527_A_C | chr17:661527 | 468 | 576 | 4,672 | — |
| chr17_661531_A_G | chr17:661531 | 468 | 480 | 4,608 | — |
| chr17_661531_A_T | chr17:661531 | 468 | 512 | 3,200 | 1.3e-5 |
| chr17_661533_A_T | chr17:661533 | 468 | 368 | 3,136 | — |
| chr17_661526_A_C | chr17:661526 | 464 | 464 | 4,672 | — |
| chr17_661527_A_T | chr17:661527 | 460 | 608 | 3,712 | — |
| chr17_661524_A_T | chr17:661524 | 460 | 400 | 3,136 | — |
| chr17_661530_A_G | chr17:661530 | 456 | 480 | 4,608 | — |
| chr17_661526_A_G | chr17:661526 | 452 | 448 | 5,440 | — |
| chr17_661529_A_C | chr17:661529 | 448 | 592 | 5,248 | — |
| chr17_714508_C_T | chr17:714508 | -448 | 480 | 3,328 | 6.6e-6 |
| chr17_714565_G_C | chr17:714565 | 448 | -160 | -2,816 | 6.6e-6 |
| chr17_661533_A_C | chr17:661533 | 396 | 304 | 3,904 | — |
| chr17_661525_A_C | chr17:661525 | 388 | 448 | 4,160 | — |
| chr17_714588_C_A | chr17:714588 | 384 | 128 | 2,048 | 5.9e-5 |
| chr17_661534_A_T | chr17:661534 | 376 | 288 | 2,496 | — |
| chr17_661525_A_G | chr17:661525 | 356 | 368 | 4,736 | — |
| chr17_661530_A_C | chr17:661530 | 356 | 512 | 4,608 | — |
| chr17_661531_A_C | chr17:661531 | 348 | 480 | 4,352 | — |
| chr17_661532_A_G | chr17:661532 | 344 | 432 | 4,032 | — |
| chr17_661533_A_G | chr17:661533 | 340 | 320 | 3,904 | — |
| chr17_661534_A_C | chr17:661534 | 304 | 208 | 3,136 | — |
| chr17_661532_A_T | chr17:661532 | 296 | 480 | 2,816 | — |
| chr17_661524_A_G | chr17:661524 | 288 | 288 | 3,712 | — |
| chr17_661532_A_C | chr17:661532 | 268 | 432 | 3,968 | — |
| chr17_661523_A_G | chr17:661523 | 268 | 256 | 3,136 | — |
| chr17_661523_A_T | chr17:661523 | 268 | 192 | 2,496 | — |
| chr17_661534_A_G | chr17:661534 | 264 | 208 | 3,008 | — |
| chr17_652533_C_A | chr17:652533 | -256 | 80 | -2,048 | — |
| chr17_661535_A_T | chr17:661535 | 252 | 368 | 2,496 | — |
| chr17_661522_A_G | chr17:661522 | 248 | 208 | 2,048 | — |
| chr17_661620_A_C | chr17:661620 | 224 | -224 | 2,176 | — |
| chr17_661524_A_C | chr17:661524 | 192 | 288 | 2,944 | — |
| chr17_715018_C_T | chr17:715018 | 192 | -320 | -2,816 | 2.6e-5 |
| chr17_661538_T_A | chr17:661538 | -176 | -336 | -2,048 | 2.2e-3 |
| chr17_661622_C_T | chr17:661622 | -172 | -432 | 3,136 | — |
| chr17_661560_A_G | chr17:661560 | 166 | 48 | 2,048 | — |
| chr17_661549_C_A | chr17:661549 | -144 | -288 | -3,712 | — |
| chr17_714901_G_A | chr17:714901 | -128 | -288 | -4,608 | 6.6e-6 |
| chr17_714867_G_T | chr17:714867 | 128 | -64 | -3,072 | 6.6e-6 |
| chr17_661550_A_G | chr17:661550 | 128 | 192 | 2,048 | — |
| chr17_714868_G_A | chr17:714868 | 128 | -320 | -2,048 | 6.6e-6 |
| chr17_661523_A_C | chr17:661523 | 120 | 176 | 2,304 | — |
| chr17_661535_A_G | chr17:661535 | 112 | 160 | 2,624 | 6.7e-6 |
| chr17_661559_C_A | chr17:661559 | -66 | -32 | -2,176 | — |
| chr17_714575_C_G | chr17:714575 | -64 | 32 | 2,816 | 6.6e-6 |
| chr17_652585_G_A | chr17:652585 | 32 | 448 | -1,920 | 6.6e-6 |
| chr17_661535_A_C | chr17:661535 | 24 | 192 | 2,688 | — |
| chr17_661564_C_A | chr17:661564 | -8 | -112 | -2,112 | — |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.