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TLR1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near TLR1
chr4:38,696,254..38,904,791, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr4_38787799_A_T | chr4:38787799 | 1.000 | 1.000 | 0.747 | — |
| chr4_38787795_A_G | chr4:38787795 | 1.000 | 1.000 | 0.712 | — |
| chr4_38787786_C_A | chr4:38787786 | 1.000 | 1.000 | 0.626 | — |
| chr4_38787797_A_C | chr4:38787797 | -1.000 | -1.000 | -0.894 | — |
| chr4_38787789_T_G | chr4:38787789 | 1.000 | 1.000 | 0.594 | — |
| chr4_38787797_A_T | chr4:38787797 | -1.000 | -1.000 | -0.903 | — |
| chr4_38787797_A_G | chr4:38787797 | -1.000 | -1.000 | -0.812 | — |
| chr4_38787764_A_T | chr4:38787764 | 0.921 | 1.000 | 0.715 | — |
| chr4_38787788_A_G | chr4:38787788 | 0.879 | 0.987 | 0.485 | — |
| chr4_38787798_A_G | chr4:38787798 | -0.877 | -1.000 | -0.735 | — |
| chr4_38787798_A_T | chr4:38787798 | -0.869 | -1.000 | -0.747 | — |
| chr4_38787787_C_G | chr4:38787787 | 0.869 | 0.980 | 0.550 | — |
| chr4_38787786_C_G | chr4:38787786 | 0.848 | 0.937 | 0.453 | — |
| chr4_38787786_C_T | chr4:38787786 | 0.824 | 0.485 | 0.259 | — |
| chr4_38787787_C_A | chr4:38787787 | 0.819 | 0.914 | 0.426 | — |
| chr4_38787796_C_A | chr4:38787796 | -0.798 | -0.835 | -0.641 | — |
| chr4_38787796_C_G | chr4:38787796 | -0.797 | -0.893 | -0.656 | — |
| chr4_38787788_A_C | chr4:38787788 | 0.790 | 0.942 | 0.391 | — |
| chr4_38787800_C_A | chr4:38787800 | -0.755 | -0.853 | -0.618 | — |
| chr4_38787800_C_G | chr4:38787800 | -0.753 | -0.929 | -0.632 | — |
| chr4_38787782_G_A | chr4:38787782 | 0.750 | 0.703 | 0.456 | — |
| chr4_38787793_A_C | chr4:38787793 | -0.748 | -0.835 | -0.576 | — |
| chr4_38787795_A_C | chr4:38787795 | -0.747 | -0.777 | -0.594 | — |
| chr4_38787781_G_C | chr4:38787781 | 0.743 | 0.802 | 0.435 | — |
| chr4_38787799_A_C | chr4:38787799 | 0.720 | 0.739 | 0.421 | — |
| chr4_38787798_A_C | chr4:38787798 | -0.685 | -0.919 | -0.559 | — |
| chr4_38787789_T_C | chr4:38787789 | 0.664 | 0.690 | 0.374 | — |
| chr4_38787788_A_T | chr4:38787788 | 0.615 | 0.754 | 0.368 | — |
| chr4_38787800_C_T | chr4:38787800 | -0.605 | -0.695 | -0.526 | 0.117% |
| chr4_38787761_C_T | chr4:38787761 | -0.580 | -0.584 | -0.438 | — |
| chr4_38787781_G_T | chr4:38787781 | 0.580 | 0.685 | 0.356 | — |
| chr4_38787792_T_A | chr4:38787792 | -0.562 | -0.716 | -0.441 | — |
| chr4_38787783_C_T | chr4:38787783 | 0.554 | 0.533 | 0.294 | — |
| chr4_38787795_A_T | chr4:38787795 | -0.545 | -0.668 | -0.482 | — |
| chr4_38787785_A_C | chr4:38787785 | 0.528 | 0.614 | 0.347 | — |
| chr4_38787792_T_G | chr4:38787792 | -0.504 | -0.619 | -0.362 | — |
| chr4_38787789_T_A | chr4:38787789 | 0.488 | 0.640 | 0.274 | — |
| chr4_38787792_T_C | chr4:38787792 | -0.472 | -0.602 | -0.368 | — |
| chr4_38787782_G_C | chr4:38787782 | 0.462 | 0.515 | 0.221 | — |
| chr4_38787755_G_A | chr4:38787755 | 0.457 | 0.472 | 0.188 | — |
| chr4_38787794_C_G | chr4:38787794 | -0.453 | -0.551 | -0.338 | — |
| chr4_38787759_T_C | chr4:38787759 | -0.447 | -0.482 | -0.315 | — |
| chr4_38787787_C_T | chr4:38787787 | 0.445 | 0.487 | 0.194 | — |
| chr4_38787773_C_T | chr4:38787773 | -0.443 | -0.500 | -0.329 | 0.0020% |
| chr4_38787769_C_A | chr4:38787769 | 0.441 | 0.576 | 0.344 | — |
| chr4_38787781_G_A | chr4:38787781 | 0.439 | 0.495 | 0.235 | — |
| chr4_38787775_G_T | chr4:38787775 | -0.436 | -0.548 | -0.371 | — |
| chr4_38787772_A_C | chr4:38787772 | 0.407 | 0.315 | 0.353 | — |
| chr4_38787790_A_T | chr4:38787790 | -0.404 | -0.475 | -0.259 | — |
| chr4_38787791_T_G | chr4:38787791 | 0.394 | 0.515 | 0.191 | — |
| chr4_38787768_A_C | chr4:38787768 | -0.386 | -0.480 | -0.300 | — |
| chr4_38787763_T_A | chr4:38787763 | 0.362 | 0.424 | 0.294 | — |
| chr4_38787794_C_T | chr4:38787794 | -0.343 | -0.447 | -0.306 | 0.0013% |
| chr4_38787749_T_G | chr4:38787749 | 0.336 | 0.223 | 0.200 | — |
| chr4_38787801_A_G | chr4:38787801 | -0.332 | -0.338 | -0.226 | — |
| chr4_38787782_G_T | chr4:38787782 | 0.328 | 0.447 | 0.156 | <0.001% |
| chr4_38787763_T_C | chr4:38787763 | 0.319 | 0.315 | 0.256 | — |
| chr4_38787763_T_G | chr4:38787763 | 0.314 | 0.332 | 0.238 | — |
| chr4_38787790_A_G | chr4:38787790 | 0.313 | 0.368 | 0.179 | — |
| chr4_38787766_C_T | chr4:38787766 | -0.309 | -0.368 | -0.259 | — |
| chr4_38787791_T_A | chr4:38787791 | -0.300 | -0.320 | -0.253 | — |
| chr4_38787784_T_A | chr4:38787784 | 0.300 | 0.284 | 0.232 | — |
| chr4_38787783_C_G | chr4:38787783 | -0.289 | -0.330 | -0.291 | — |
| chr4_38787802_G_T | chr4:38787802 | -0.286 | -0.429 | -0.229 | — |
| chr4_38787767_C_T | chr4:38787767 | -0.285 | -0.322 | -0.221 | — |
| chr4_38787755_G_T | chr4:38787755 | -0.284 | -0.201 | -0.179 | — |
| chr4_38787774_G_C | chr4:38787774 | 0.280 | 0.234 | 0.109 | — |
| chr4_38787769_C_T | chr4:38787769 | 0.277 | 0.198 | 0.182 | — |
| chr4_38787748_T_G | chr4:38787748 | 0.272 | 0.188 | 0.262 | — |
| chr4_38787775_G_A | chr4:38787775 | -0.272 | -0.312 | -0.256 | — |
| chr4_38787802_G_A | chr4:38787802 | -0.268 | -0.355 | -0.206 | 0.0026% |
| chr4_38787771_T_C | chr4:38787771 | 0.266 | 0.294 | 0.194 | <0.001% |
| chr4_38787757_A_C | chr4:38787757 | -0.265 | -0.168 | -0.071 | — |
| chr4_38787801_A_T | chr4:38787801 | 0.265 | 0.335 | 0.156 | — |
| chr4_38787758_T_A | chr4:38787758 | -0.264 | -0.213 | -0.156 | — |
| chr4_38787766_C_G | chr4:38787766 | -0.254 | -0.302 | -0.200 | — |
| chr4_38787758_T_C | chr4:38787758 | -0.249 | -0.223 | -0.138 | — |
| chr4_38787791_T_C | chr4:38787791 | -0.248 | -0.320 | -0.229 | 0.0026% |
| chr4_38787765_G_T | chr4:38787765 | -0.240 | -0.175 | -0.174 | — |
| chr4_38787783_C_A | chr4:38787783 | 0.239 | 0.190 | 0.082 | — |
| chr4_38787753_A_C | chr4:38787753 | 0.234 | 0.162 | 0.106 | — |
| chr4_38787756_C_G | chr4:38787756 | -0.232 | -0.147 | -0.100 | — |
| chr4_38787784_T_C | chr4:38787784 | -0.223 | -0.279 | -0.159 | — |
| chr4_38787770_A_G | chr4:38787770 | 0.220 | 0.272 | 0.235 | — |
| chr4_38787779_G_T | chr4:38787779 | 0.214 | 0.259 | 0.135 | — |
| chr4_38787756_C_T | chr4:38787756 | -0.209 | -0.147 | -0.132 | — |
| chr4_38787758_T_G | chr4:38787758 | -0.209 | -0.145 | -0.091 | — |
| chr4_38787769_C_G | chr4:38787769 | 0.209 | 0.274 | 0.135 | — |
| chr4_38787768_A_T | chr4:38787768 | -0.208 | -0.246 | -0.135 | — |
| chr4_38787771_T_G | chr4:38787771 | 0.207 | 0.183 | 0.121 | <0.001% |
| chr4_38787802_G_C | chr4:38787802 | -0.205 | -0.310 | -0.126 | — |
| chr4_38787767_C_G | chr4:38787767 | -0.201 | -0.254 | -0.097 | — |
| chr4_38787748_T_C | chr4:38787748 | 0.200 | 0.145 | 0.129 | <0.001% |
| chr4_38787759_T_A | chr4:38787759 | -0.196 | -0.150 | -0.115 | — |
| chr4_38787785_A_G | chr4:38787785 | -0.196 | -0.272 | -0.044 | — |
| chr4_38787754_A_T | chr4:38787754 | -0.192 | -0.223 | -0.165 | — |
| chr4_38787780_T_G | chr4:38787780 | -0.190 | -0.091 | -0.115 | — |
| chr4_38787752_C_T | chr4:38787752 | -0.189 | -0.145 | -0.103 | — |
| chr4_38787760_C_A | chr4:38787760 | -0.189 | -0.091 | -0.071 | — |
| chr4_38787785_A_T | chr4:38787785 | 0.186 | 0.279 | 0.156 | — |
| chr4_38787773_C_G | chr4:38787773 | -0.182 | -0.175 | -0.144 | — |
| chr4_38787793_A_T | chr4:38787793 | -0.178 | -0.117 | -0.100 | — |
| chr4_38787755_G_C | chr4:38787755 | -0.177 | -0.063 | -0.068 | — |
| chr4_38787754_A_C | chr4:38787754 | -0.168 | -0.246 | -0.109 | — |
| chr4_38787784_T_G | chr4:38787784 | 0.168 | 0.198 | 0.135 | — |
| chr4_38787799_A_G | chr4:38787799 | 0.167 | 0.162 | 0.124 | 0.0039% |
| chr4_38787751_T_C | chr4:38787751 | 0.165 | 0.132 | 0.085 | — |
| chr4_38787762_A_T | chr4:38787762 | -0.161 | -0.193 | -0.076 | — |
| chr4_38787748_T_A | chr4:38787748 | 0.160 | -0.069 | 0.009 | — |
| chr4_38787760_C_G | chr4:38787760 | -0.159 | -0.051 | 0.000 | — |
| chr4_38787774_G_A | chr4:38787774 | -0.159 | -0.178 | -0.144 | 0.0013% |
| chr4_38787778_A_T | chr4:38787778 | -0.153 | -0.269 | -0.085 | — |
| chr4_38787779_G_C | chr4:38787779 | 0.147 | 0.152 | 0.088 | — |
| chr4_38787776_C_A | chr4:38787776 | -0.146 | -0.107 | -0.144 | — |
| chr4_38787761_C_G | chr4:38787761 | -0.142 | -0.051 | -0.041 | — |
| chr4_38787780_T_A | chr4:38787780 | 0.140 | 0.213 | 0.118 | — |
| chr4_38787762_A_C | chr4:38787762 | -0.137 | -0.081 | -0.018 | — |
| chr4_38787767_C_A | chr4:38787767 | -0.136 | -0.157 | -0.062 | — |
| chr4_38787777_T_C | chr4:38787777 | 0.131 | 0.147 | 0.129 | — |
| chr4_38787757_A_T | chr4:38787757 | -0.128 | 0.023 | 0.006 | — |
| chr4_38787756_C_A | chr4:38787756 | -0.125 | -0.076 | -0.068 | — |
| chr4_38787753_A_G | chr4:38787753 | -0.122 | -0.099 | -0.059 | — |
| chr4_38787760_C_T | chr4:38787760 | -0.116 | -0.010 | 0.015 | — |
| chr4_38787757_A_G | chr4:38787757 | -0.115 | -0.033 | 0.029 | — |
| chr4_38787771_T_A | chr4:38787771 | 0.106 | 0.109 | 0.124 | — |
| chr4_38787750_T_C | chr4:38787750 | -0.091 | -0.307 | -0.088 | — |
| chr4_38787778_A_C | chr4:38787778 | 0.101 | 0.043 | 0.124 | — |
| chr4_38787750_T_A | chr4:38787750 | 0.100 | -0.053 | 0.009 | — |
| chr4_38787765_G_C | chr4:38787765 | -0.096 | -0.074 | -0.088 | — |
| chr4_38787803_G_T | chr4:38787803 | 0.092 | 0.015 | 0.024 | — |
| chr4_38787761_C_A | chr4:38787761 | -0.090 | 0.005 | -0.035 | — |
| chr4_38787773_C_A | chr4:38787773 | -0.087 | -0.096 | -0.106 | — |
| chr4_38787766_C_A | chr4:38787766 | -0.085 | -0.058 | -0.103 | — |
| chr4_38787759_T_G | chr4:38787759 | -0.084 | -0.061 | 0.018 | — |
| chr4_38787804_A_C | chr4:38787804 | 0.017 | 0.129 | 0.147 | — |
| chr4_38787772_A_T | chr4:38787772 | -0.077 | -0.094 | -0.032 | — |
| chr4_38750372_A_C | chr4:38750372 | 0.002 | 0.037 | 0.135 | — |
| chr4_38787764_A_C | chr4:38787764 | -0.077 | -0.066 | -0.012 | — |
| chr4_38787753_A_T | chr4:38787753 | -0.074 | -0.041 | -0.056 | — |
| chr4_38750370_A_G | chr4:38750370 | -0.002 | 0.023 | 0.129 | — |
| chr4_38787776_C_T | chr4:38787776 | -0.071 | -0.041 | -0.076 | — |
| chr4_38787776_C_G | chr4:38787776 | 0.069 | 0.112 | 0.012 | — |
| chr4_38750369_T_C | chr4:38750369 | 0.003 | 0.027 | 0.121 | — |
| chr4_38750364_A_G | chr4:38750364 | -0.002 | 0.025 | 0.118 | — |
| chr4_38750366_A_C | chr4:38750366 | 0.003 | 0.020 | 0.115 | — |
| chr4_38750370_A_C | chr4:38750370 | -0.001 | 0.022 | 0.115 | — |
| chr4_38750372_A_G | chr4:38750372 | 0.003 | 0.037 | 0.115 | — |
| chr4_38750371_T_C | chr4:38750371 | 0.001 | 0.020 | 0.112 | — |
| chr4_38750375_T_C | chr4:38750375 | 0.004 | 0.018 | 0.112 | <0.001% |
| chr4_38750365_T_C | chr4:38750365 | 0.003 | 0.019 | 0.109 | — |
| chr4_38750374_A_C | chr4:38750374 | -0.001 | 0.019 | 0.109 | — |
| chr4_38787794_C_A | chr4:38787794 | 0.060 | 0.020 | 0.021 | — |
| chr4_38787754_A_G | chr4:38787754 | -0.059 | -0.102 | -0.041 | — |
| chr4_38750363_T_G | chr4:38750363 | 0.003 | 0.019 | 0.103 | — |
| chr4_38750382_G_A | chr4:38750382 | -0.007 | -0.016 | -0.103 | <0.001% |
| chr4_38787751_T_G | chr4:38787751 | 0.057 | 0.051 | 0.050 | — |
| chr4_38750366_A_G | chr4:38750366 | 0.000 | 0.016 | 0.100 | — |
| chr4_38750373_A_C | chr4:38750373 | 0.005 | 0.025 | 0.100 | — |
| chr4_38750360_A_G | chr4:38750360 | 0.000 | 0.014 | 0.094 | — |
| chr4_38750364_A_C | chr4:38750364 | -0.007 | 0.020 | 0.094 | — |
| chr4_38750367_A_C | chr4:38750367 | 0.009 | 0.019 | 0.094 | <0.001% |
| chr4_38750369_T_G | chr4:38750369 | -0.001 | 0.014 | 0.094 | — |
| chr4_38750365_T_G | chr4:38750365 | -0.004 | 0.013 | 0.091 | — |
| chr4_38750368_A_G | chr4:38750368 | 0.002 | 0.016 | 0.091 | — |
| chr4_38787751_T_A | chr4:38787751 | -0.052 | -0.142 | -0.059 | — |
| chr4_38787775_G_C | chr4:38787775 | -0.047 | -0.122 | -0.091 | — |
| chr4_38787765_G_A | chr4:38787765 | -0.051 | -0.069 | -0.074 | — |
| chr4_38750368_A_C | chr4:38750368 | -0.003 | 0.015 | 0.088 | — |
| chr4_38750374_A_G | chr4:38750374 | 0.002 | 0.015 | 0.088 | — |
| chr4_38750376_A_G | chr4:38750376 | -0.006 | 0.018 | 0.088 | — |
| chr4_38750363_T_C | chr4:38750363 | 0.006 | 0.015 | 0.085 | — |
| chr4_38750376_A_C | chr4:38750376 | -0.006 | 0.013 | 0.085 | — |
| chr4_38787790_A_C | chr4:38787790 | -0.048 | -0.109 | -0.074 | — |
| chr4_38750371_T_G | chr4:38750371 | -0.007 | 0.016 | 0.082 | — |
| chr4_38787764_A_G | chr4:38787764 | 0.004 | 0.086 | 0.082 | — |
| chr4_38750362_T_G | chr4:38750362 | 0.004 | 0.013 | 0.079 | — |
| chr4_38787752_C_G | chr4:38787752 | 0.045 | 0.096 | 0.044 | — |
| chr4_38750359_T_C | chr4:38750359 | 0.000 | 0.008 | 0.076 | — |
| chr4_38750382_G_T | chr4:38750382 | -0.005 | -0.008 | -0.074 | — |
| chr4_38787772_A_G | chr4:38787772 | 0.014 | -0.018 | 0.074 | — |
| chr4_38787749_T_A | chr4:38787749 | 0.041 | -0.028 | -0.015 | — |
| chr4_38749468_T_C | chr4:38749468 | -0.040 | 0.028 | 0.018 | — |
| chr4_38750361_T_G | chr4:38750361 | 0.000 | 0.008 | 0.071 | — |
| chr4_38750373_A_G | chr4:38750373 | -0.001 | 0.011 | 0.071 | — |
| chr4_38750375_T_G | chr4:38750375 | -0.002 | 0.010 | 0.071 | — |
| chr4_38750444_T_A | chr4:38750444 | 0.040 | 0.020 | 0.021 | — |
| chr4_38787749_T_C | chr4:38787749 | 0.039 | -0.091 | -0.026 | — |
| chr4_38787777_T_G | chr4:38787777 | 0.039 | -0.104 | -0.006 | — |
| chr4_38749469_A_T | chr4:38749469 | -0.038 | 0.005 | -0.018 | — |
| chr4_38750381_T_G | chr4:38750381 | -0.011 | 0.001 | 0.068 | — |
| chr4_38787747_C_A | chr4:38787747 | 0.018 | 0.114 | -0.015 | — |
| chr4_38750359_T_G | chr4:38750359 | -0.001 | 0.005 | 0.065 | — |
| chr4_38750360_A_C | chr4:38750360 | -0.006 | 0.004 | 0.065 | — |
| chr4_38749468_T_G | chr4:38749468 | -0.036 | -0.048 | 0.003 | — |
| chr4_38750358_A_C | chr4:38750358 | -0.002 | 0.005 | 0.062 | — |
| chr4_38750367_A_G | chr4:38750367 | -0.004 | 0.011 | 0.062 | — |
| chr4_38749468_T_A | chr4:38749468 | -0.034 | 0.008 | -0.004 | — |
| chr4_38749452_T_G | chr4:38749452 | -0.033 | -0.010 | 0.003 | — |
| chr4_38749491_T_G | chr4:38749491 | -0.033 | -0.001 | 0.006 | — |
| chr4_38749510_A_T | chr4:38749510 | 0.033 | 0.016 | -0.013 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.