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TMEM254-AS1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near TMEM254-AS1

chr10:79,946,232..80,179,193, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant Position PXR FXR AhR AF
chr10_79981855_T_Gchr10:799818550.9781.0001.000—   
chr10_79981775_G_Cchr10:799817751.0000.8581.000—   
chr10_79981786_G_Tchr10:79981786-0.859-0.736-1.000—   
chr10_79981828_C_Achr10:799818280.7751.0001.000—   
chr10_79981718_T_Cchr10:79981718-0.827-0.609-1.000—   
chr10_79981786_G_Cchr10:79981786-0.734-0.569-1.000—   
chr10_79981790_G_Achr10:79981790-0.687-0.595-1.000—   
chr10_79981787_G_Cchr10:79981787-0.700-0.492-1.000—   
chr10_79981787_G_Achr10:79981787-0.687-0.482-1.000—   
chr10_79981752_G_Achr10:799817520.8241.0001.000—   
chr10_79981787_G_Tchr10:79981787-0.656-0.440-1.000—   
chr10_79981791_T_Achr10:799817910.5160.3761.000—   
chr10_79981788_C_Gchr10:79981788-0.594-0.400-1.000—   
chr10_79981786_G_Achr10:79981786-0.561-0.368-1.0000.0026%
chr10_79981785_A_Cchr10:79981785-0.569-0.453-1.000—   
chr10_79981617_C_Achr10:799816170.1550.3071.000—   
chr10_79981788_C_Tchr10:79981788-0.504-0.336-1.000—   
chr10_79981791_T_Gchr10:799817910.4730.3451.000—   
chr10_79981717_C_Achr10:79981717-0.451-0.395-1.000—   
chr10_79981785_A_Gchr10:799817850.4790.2841.000—   
chr10_79981784_G_Cchr10:79981784-0.551-0.461-1.000—   
chr10_79981737_G_Tchr10:79981737-0.426-0.456-1.000—   
chr10_79981789_G_Cchr10:79981789-0.466-0.341-1.000—   
chr10_79981758_C_Achr10:79981758-0.384-0.416-1.000—   
chr10_79981715_G_Tchr10:799817150.5870.2921.000—   
chr10_79981769_G_Tchr10:79981769-0.416-0.369-1.000—   
chr10_79981714_C_Gchr10:79981714-0.527-0.302-1.000<0.001%
chr10_79981754_A_Tchr10:799817540.5770.6271.000—   
chr10_79981716_C_Gchr10:79981716-0.453-0.312-1.000—   
chr10_79981815_G_Cchr10:799818150.3680.2771.000—   
chr10_79981789_G_Tchr10:79981789-0.463-0.315-1.000—   
chr10_79981795_C_Tchr10:799817950.2660.1901.000—   
chr10_79981721_C_Achr10:79981721-0.358-0.241-1.000—   
chr10_79981595_C_Tchr10:79981595-0.193-0.312-1.000—   
chr10_79981683_G_Cchr10:799816830.5860.2510.853—   
chr10_79981716_C_Tchr10:79981716-0.428-0.270-1.000—   
chr10_79981602_C_Achr10:79981602-0.271-0.274-1.000—   
chr10_79981722_A_Gchr10:79981722-0.363-0.294-0.982—   
chr10_79981546_A_Cchr10:79981546-0.197-0.373-0.974—   
chr10_79981785_A_Tchr10:79981785-0.416-0.324-0.965—   
chr10_79981719_C_Gchr10:79981719-0.379-0.185-0.953—   
chr10_79981783_G_Tchr10:79981783-0.413-0.291-0.953—   
chr10_79981584_A_Tchr10:79981584-0.283-0.350-0.941—   
chr10_79981783_G_Cchr10:79981783-0.411-0.321-0.941—   
chr10_79981690_T_Gchr10:79981690-0.463-0.332-0.935—   
chr10_79981747_C_Gchr10:799817470.4540.3580.906—   
chr10_79981792_G_Achr10:79981792-0.326-0.335-0.906—   
chr10_79981551_A_Cchr10:799815510.3730.2310.900<0.001%
chr10_79981714_C_Achr10:79981714-0.383-0.254-0.900—   
chr10_79981774_A_Cchr10:799817740.3630.2660.894—   
chr10_79981842_G_Achr10:799818420.3930.4390.871—   
chr10_79981720_C_Gchr10:79981720-0.301-0.180-0.865—   
chr10_79981807_C_Gchr10:79981807-0.486-0.231-0.671—   
chr10_79981799_G_Cchr10:79981799-0.484-0.307-0.753—   
chr10_79981720_C_Tchr10:79981720-0.351-0.195-0.847—   
chr10_79981632_G_Cchr10:79981632-0.288-0.142-0.841<0.001%
chr10_79981696_C_Achr10:799816960.4760.2460.753—   
chr10_79981714_C_Tchr10:79981714-0.363-0.231-0.841—   
chr10_79981717_C_Gchr10:79981717-0.309-0.198-0.841—   
chr10_79981719_C_Tchr10:79981719-0.318-0.179-0.841—   
chr10_79981708_G_Cchr10:799817080.3160.3150.835—   
chr10_79981788_C_Achr10:79981788-0.316-0.189-0.824—   
chr10_79981795_C_Achr10:799817950.2410.2160.824—   
chr10_79981721_C_Gchr10:79981721-0.324-0.225-0.818—   
chr10_79981753_G_Achr10:799817530.2610.3250.812—   
chr10_79981755_T_Gchr10:799817550.1560.2180.800—   
chr10_79981712_G_Cchr10:79981712-0.238-0.165-0.788—   
chr10_79981713_G_Cchr10:79981713-0.354-0.206-0.788—   
chr10_79981715_G_Cchr10:799817150.4080.2280.788—   
chr10_79981794_C_Gchr10:79981794-0.258-0.305-0.788—   
chr10_79981689_G_Achr10:799816890.4440.4260.029—   
chr10_79981614_G_Achr10:79981614-0.220-0.277-0.782—   
chr10_79981633_C_Tchr10:79981633-0.266-0.117-0.776—   
chr10_79981730_G_Cchr10:79981730-0.401-0.236-0.776—   
chr10_79981577_G_Tchr10:799815770.2180.3580.759—   
chr10_79981834_C_Tchr10:79981834-0.428-0.338-0.718—   
chr10_79981717_C_Tchr10:79981717-0.348-0.213-0.753—   
chr10_79981754_A_Cchr10:799817540.2580.3120.753<0.001%
chr10_79981720_C_Achr10:79981720-0.271-0.157-0.741—   
chr10_79981753_G_Tchr10:799817530.2310.2940.741—   
chr10_79981764_T_Achr10:799817640.2580.3980.741—   
chr10_79981847_C_Achr10:799818470.4080.2770.741—   
chr10_79981765_A_Tchr10:799817650.2410.1930.729—   
chr10_79981847_C_Tchr10:79981847-0.278-0.277-0.729—   
chr10_79981844_G_Cchr10:79981844-0.409-0.289-0.706—   
chr10_79981612_T_Achr10:799816120.2280.2080.718—   
chr10_79981696_C_Gchr10:799816960.4060.1400.582—   
chr10_79981722_A_Tchr10:79981722-0.253-0.190-0.706—   
chr10_79981754_A_Gchr10:799817540.1650.2640.706<0.001%
chr10_79981773_C_Tchr10:79981773-0.291-0.198-0.7060.024%
chr10_79981784_G_Tchr10:799817840.2200.3070.706—   
chr10_79981849_A_Gchr10:799818490.3990.3930.424—   
chr10_79981680_A_Tchr10:79981680-0.213-0.241-0.688—   
chr10_79981784_G_Achr10:79981784-0.263-0.201-0.6820.0013%
chr10_79981620_C_Achr10:799816200.3830.076-0.124—   
chr10_79981633_C_Achr10:79981633-0.173-0.089-0.676—   
chr10_79981643_C_Achr10:79981643-0.160-0.118-0.676—   
chr10_79981719_C_Achr10:79981719-0.151-0.053-0.676—   
chr10_79981793_C_Gchr10:79981793-0.383-0.274-0.494—   
chr10_79981789_G_Achr10:79981789-0.334-0.270-0.6710.0026%
chr10_79981817_G_Cchr10:79981817-0.378-0.254-0.541—   
chr10_79981580_G_Cchr10:799815800.2310.4340.6650.0085%
chr10_79981624_G_Tchr10:79981624-0.253-0.160-0.647—   
chr10_79981757_G_Achr10:799817570.1250.2110.647—   
chr10_79981777_C_Achr10:79981777-0.203-0.157-0.647—   
chr10_79981808_G_Cchr10:79981808-0.366-0.249-0.482—   
chr10_79981793_C_Achr10:79981793-0.364-0.226-0.471—   
chr10_79981640_T_Achr10:79981640-0.173-0.198-0.641—   
chr10_79981669_T_Gchr10:79981669-0.295-0.169-0.641—   
chr10_79981794_C_Achr10:79981794-0.258-0.254-0.635—   
chr10_79981634_C_Achr10:79981634-0.308-0.185-0.629—   
chr10_79981756_G_Cchr10:799817560.1900.1450.624—   
chr10_79981716_C_Achr10:79981716-0.285-0.154-0.612—   
chr10_79981723_C_Tchr10:79981723-0.087-0.145-0.612—   
chr10_79981753_G_Cchr10:799817530.2410.2690.612—   
chr10_79981777_C_Tchr10:79981777-0.276-0.226-0.612—   
chr10_79981697_G_Achr10:799816970.3440.1520.4530.0039%
chr10_79981663_A_Tchr10:79981663-0.263-0.197-0.606—   
chr10_79981702_A_Gchr10:79981702-0.336-0.217-0.606—   
chr10_79981645_C_Gchr10:799816450.1410.1950.600—   
chr10_79981792_G_Cchr10:79981792-0.338-0.246-0.553—   
chr10_79981834_C_Gchr10:79981834-0.338-0.274-0.553—   
chr10_79981659_A_Gchr10:79981659-0.077-0.113-0.594—   
chr10_79981668_G_Achr10:79981668-0.073-0.146-0.594<0.001%
chr10_79981724_T_Cchr10:79981724-0.180-0.137-0.594—   
chr10_79981770_C_Gchr10:799817700.3360.3020.376—   
chr10_79981634_C_Gchr10:79981634-0.263-0.152-0.588—   
chr10_79981795_C_Gchr10:799817950.0580.0000.588—   
chr10_79981601_C_Achr10:79981601-0.190-0.132-0.582—   
chr10_79981746_G_Cchr10:79981746-0.228-0.137-0.582—   
chr10_79981765_A_Cchr10:799817650.1180.1680.576—   
chr10_79981744_G_Cchr10:799817440.3240.2720.176—   
chr10_79981773_C_Gchr10:79981773-0.231-0.119-0.565—   
chr10_79981813_G_Cchr10:79981813-0.319-0.236-0.365—   
chr10_79981660_A_Cchr10:79981660-0.013-0.065-0.559—   
chr10_79981687_A_Tchr10:79981687-0.140-0.184-0.559—   
chr10_79981575_T_Cchr10:799815750.1430.1570.553—   
chr10_79981601_C_Tchr10:79981601-0.100-0.096-0.553—   
chr10_79981755_T_Achr10:799817550.1130.1520.553—   
chr10_79981756_G_Tchr10:799817560.1780.1290.553—   
chr10_79981826_G_Tchr10:79981826-0.057-0.053-0.553—   
chr10_79981609_T_Cchr10:79981609-0.077-0.174-0.547<0.001%
chr10_79981660_A_Tchr10:79981660-0.020-0.048-0.547—   
chr10_79981772_A_Cchr10:79981772-0.300-0.180-0.5410.0046%
chr10_79981558_G_Cchr10:799815580.2100.1140.535—   
chr10_79981574_G_Tchr10:799815740.0500.1450.535—   
chr10_79981600_C_Achr10:799816000.1000.033-0.535—   
chr10_79981602_C_Gchr10:79981602-0.150-0.074-0.535—   
chr10_79981599_T_Gchr10:799815990.043-0.0130.529—   
chr10_79981792_G_Tchr10:79981792-0.300-0.206-0.259—   
chr10_79981798_C_Tchr10:79981798-0.193-0.180-0.529—   
chr10_79981639_T_Gchr10:79981639-0.296-0.213-0.406—   
chr10_79981696_C_Tchr10:799816960.2950.0630.329—   
chr10_79981599_T_Cchr10:79981599-0.165-0.071-0.518—   
chr10_79981659_A_Tchr10:79981659-0.078-0.094-0.518—   
chr10_79981734_G_Tchr10:79981734-0.087-0.122-0.518—   
chr10_79981751_A_Cchr10:799817510.1900.2110.518—   
chr10_79981627_G_Cchr10:79981627-0.206-0.055-0.512—   
chr10_79981683_G_Tchr10:79981683-0.111-0.110-0.512—   
chr10_79981775_G_Tchr10:79981775-0.223-0.117-0.506—   
chr10_79981782_A_Gchr10:79981782-0.265-0.173-0.506—   
chr10_79981806_G_Cchr10:799818060.2760.1550.506—   
chr10_79981574_G_Achr10:799815740.0750.1680.500—   
chr10_79981632_G_Achr10:79981632-0.163-0.079-0.500—   
chr10_79981634_C_Tchr10:79981634-0.235-0.114-0.500—   
chr10_79981689_G_Tchr10:799816890.0130.0860.500—   
chr10_79981593_C_Gchr10:79981593-0.271-0.162-0.494—   
chr10_79981600_C_Tchr10:79981600-0.280-0.058-0.359—   
chr10_79981755_T_Cchr10:799817550.1200.1520.494—   
chr10_79981781_G_Tchr10:799817810.2160.1120.494—   
chr10_79981793_C_Tchr10:799817930.126-0.0150.494—   
chr10_79981809_C_Gchr10:799818090.1260.0580.494—   
chr10_79981830_G_Tchr10:79981830-0.140-0.127-0.494—   
chr10_79981836_T_Achr10:799818360.1880.1620.494—   
chr10_79981790_G_Tchr10:79981790-0.278-0.221-0.435—   
chr10_79981539_T_Cchr10:79981539-0.181-0.099-0.488—   
chr10_79981575_T_Gchr10:799815750.1230.1900.488—   
chr10_79981624_G_Cchr10:79981624-0.208-0.127-0.482—   
chr10_79981633_C_Gchr10:79981633-0.180-0.076-0.482—   
chr10_79981661_C_Gchr10:79981661-0.015-0.041-0.482—   
chr10_79981756_G_Achr10:799817560.1080.1140.482—   
chr10_79981782_A_Cchr10:79981782-0.175-0.185-0.482—   
chr10_79981821_A_Tchr10:799818210.1010.0790.482—   
chr10_79981831_T_Achr10:79981831-0.077-0.010-0.482—   
chr10_79981721_C_Tchr10:79981721-0.120-0.114-0.476—   
chr10_79981559_G_Cchr10:799815590.2210.0910.471—   
chr10_79981680_A_Gchr10:799816800.2560.1750.471—   
chr10_79981723_C_Gchr10:79981723-0.098-0.105-0.465—   
chr10_79981574_G_Cchr10:799815740.0380.1090.459—   
chr10_79981618_T_Cchr10:79981618-0.135-0.074-0.459—   
chr10_79981641_T_Achr10:799816410.1530.025-0.459—   
chr10_79981751_A_Gchr10:799817510.0650.1400.459—   
chr10_79981825_C_Gchr10:79981825-0.233-0.081-0.459—   
chr10_79981826_G_Cchr10:79981826-0.146-0.129-0.459<0.001%
chr10_79981652_C_Gchr10:799816520.1430.0560.453—   
chr10_79981660_A_Gchr10:79981660-0.053-0.098-0.453—   
chr10_79981779_C_Gchr10:799817790.2560.0660.376—   
chr10_79981537_C_Gchr10:79981537-0.163-0.157-0.450—   
chr10_79981713_G_Tchr10:79981713-0.225-0.086-0.447—   
chr10_79981576_T_Gchr10:799815760.1550.1800.441—   

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.