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TSPAN4
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near TSPAN4
chr11:742,823..967,116, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr11_765481_G_A | chr11:765481 | -23,888 | -6,672 | -31,360 | 6.6e-6 |
| chr11_765472_C_G | chr11:765472 | -23,360 | -6,992 | -37,760 | 6.6e-6 |
| chr11_765478_G_T | chr11:765478 | -22,064 | -6,848 | -31,360 | 6.6e-6 |
| chr11_765470_G_A | chr11:765470 | -21,520 | -6,336 | -32,384 | 5.5e-4 |
| chr11_755543_C_G | chr11:755543 | -21,008 | -3,744 | -18,560 | 2.0e-5 |
| chr11_765397_C_G | chr11:765397 | 20,128 | 3,136 | 18,560 | 5.9e-5 |
| chr11_747305_C_T | chr11:747305 | -19,840 | 0 | -1,536 | 2.0e-5 |
| chr11_747294_C_G | chr11:747294 | -18,176 | 192 | 5,120 | 6.6e-6 |
| chr11_755563_G_A | chr11:755563 | 18,144 | 2,624 | 14,592 | 1.3e-5 |
| chr11_765466_T_A | chr11:765466 | -18,016 | -3,424 | -19,072 | 1.1e-4 |
| chr11_747458_C_G | chr11:747458 | 17,664 | 832 | 11,264 | 6.7e-6 |
| chr11_747457_C_G | chr11:747457 | 16,640 | 736 | 9,216 | 1.3e-5 |
| chr11_747316_C_G | chr11:747316 | -16,512 | 144 | 2,816 | 8.5e-5 |
| chr11_747314_C_T | chr11:747314 | -16,256 | 560 | 5,120 | 3.3e-5 |
| chr11_747454_C_T | chr11:747454 | 16,256 | 1,712 | 14,592 | 1.3e-5 |
| chr11_747306_G_C | chr11:747306 | -16,128 | -592 | -1,280 | 1.7e-3 |
| chr11_755609_G_C | chr11:755609 | -16,064 | -4,256 | -13,312 | 2.0e-5 |
| chr11_755539_G_A | chr11:755539 | -15,456 | -2,512 | -15,360 | 7.9e-5 |
| chr11_747452_C_T | chr11:747452 | 15,424 | 1,488 | 14,848 | 1.0e-3 |
| chr11_747310_G_A | chr11:747310 | -15,232 | 1,344 | 13,824 | 6.6e-6 |
| chr11_755538_C_T | chr11:755538 | -15,088 | -2,272 | -17,792 | 6.6e-6 |
| chr11_755628_C_A | chr11:755628 | 15,040 | 5,664 | 13,440 | 6.6e-6 |
| chr11_747308_C_A | chr11:747308 | -14,336 | 6,576 | 30,720 | 6.6e-6 |
| chr11_747287_G_C | chr11:747287 | -14,208 | 688 | 4,608 | 6.6e-6 |
| chr11_755545_T_C | chr11:755545 | -14,128 | -2,496 | -11,904 | 6.6e-6 |
| chr11_747449_C_T | chr11:747449 | 13,312 | 1,376 | 13,312 | 1.3e-5 |
| chr11_747325_C_T | chr11:747325 | 12,864 | 816 | 7,424 | 6.6e-6 |
| chr11_747469_C_T | chr11:747469 | 12,288 | 1,264 | 6,400 | 1.3e-5 |
| chr11_747470_C_A | chr11:747470 | 12,160 | 816 | 3,840 | 6.6e-6 |
| chr11_765461_G_A | chr11:765461 | 11,424 | 672 | 4,992 | 1.3e-5 |
| chr11_747210_C_G | chr11:747210 | 10,688 | -144 | 3,584 | 6.6e-6 |
| chr11_747287_G_A | chr11:747287 | -10,368 | 528 | 3,584 | 1.3e-5 |
| chr11_747466_A_G | chr11:747466 | 10,368 | 400 | 1,792 | 3.9e-5 |
| chr11_747350_A_C | chr11:747350 | -9,920 | -1,248 | -11,008 | 2.0e-5 |
| chr11_747058_C_T | chr11:747058 | 9,472 | 2,736 | 18,688 | 1.3e-5 |
| chr11_747402_A_G | chr11:747402 | -9,408 | -1,472 | -16,384 | 2.6e-5 |
| chr11_747448_C_T | chr11:747448 | 9,408 | 1,520 | 11,520 | 6.7e-6 |
| chr11_747295_G_T | chr11:747295 | 9,216 | 944 | 2,816 | 6.6e-6 |
| chr11_747266_G_T | chr11:747266 | 8,960 | 624 | 2,048 | 6.6e-6 |
| chr11_755553_G_T | chr11:755553 | -8,896 | -1,568 | -9,984 | 6.6e-6 |
| chr11_747467_C_A | chr11:747467 | 8,896 | 1,024 | 2,560 | 6.6e-6 |
| chr11_755680_G_T | chr11:755680 | 8,832 | 3,296 | 6,912 | 2.0e-5 |
| chr11_747491_T_C | chr11:747491 | -8,640 | 336 | 1,792 | 7.2e-5 |
| chr11_748279_G_C | chr11:748279 | 8,448 | 1,696 | -1,024 | 6.6e-6 |
| chr11_747450_G_A | chr11:747450 | 8,320 | 1,264 | 12,032 | 6.7e-6 |
| chr11_755536_C_T | chr11:755536 | 8,160 | 1,728 | 7,040 | 6.6e-6 |
| chr11_747354_G_T | chr11:747354 | 7,936 | 720 | 9,984 | 6.6e-6 |
| chr11_747468_C_G | chr11:747468 | 7,808 | 864 | 2,816 | 6.6e-6 |
| chr11_755559_C_T | chr11:755559 | 7,776 | 1,376 | 4,352 | 8.5e-5 |
| chr11_747445_T_C | chr11:747445 | -7,744 | -1,760 | -15,616 | 1.3e-5 |
| chr11_747076_C_T | chr11:747076 | 7,744 | 240 | 6,912 | 6.6e-6 |
| chr11_747342_C_T | chr11:747342 | 7,744 | 752 | 5,376 | 3.3e-5 |
| chr11_755599_C_G | chr11:755599 | -7,552 | -1,632 | -5,760 | 6.6e-6 |
| chr11_747446_C_T | chr11:747446 | 7,488 | 880 | 9,984 | 9.4e-5 |
| chr11_776984_G_A | chr11:776984 | 7,136 | 2,956 | 7,872 | 1.4e-4 |
| chr11_776790_C_A | chr11:776790 | 7,104 | 1,760 | 5,760 | 6.6e-6 |
| chr11_747193_G_A | chr11:747193 | 6,720 | 864 | 5,888 | 2.6e-5 |
| chr11_748294_C_T | chr11:748294 | 6,720 | -288 | -256 | 6.6e-6 |
| chr11_755677_G_A | chr11:755677 | -6,720 | -1,760 | -6,016 | 6.6e-6 |
| chr11_755568_G_A | chr11:755568 | 6,656 | 1,296 | 6,400 | 6.6e-4 |
| chr11_747311_T_G | chr11:747311 | 6,528 | -752 | -12,800 | 6.6e-6 |
| chr11_755633_C_T | chr11:755633 | -6,464 | -2,272 | -6,272 | 6.6e-6 |
| chr11_747281_G_T | chr11:747281 | 6,400 | 608 | 1,024 | 5.9e-5 |
| chr11_747261_C_T | chr11:747261 | -6,272 | 288 | -512 | 1.3e-5 |
| chr11_747229_T_A | chr11:747229 | 6,144 | -256 | 3,328 | 6.6e-6 |
| chr11_747165_C_T | chr11:747165 | 6,016 | 1,600 | 14,592 | 6.6e-6 |
| chr11_747183_G_T | chr11:747183 | -5,952 | -400 | -2,048 | 1.3e-5 |
| chr11_755672_T_G | chr11:755672 | -5,952 | -1,920 | -4,608 | 2.0e-5 |
| chr11_755682_T_C | chr11:755682 | -5,696 | -1,856 | -4,608 | 6.6e-6 |
| chr11_747274_G_A | chr11:747274 | -5,632 | 608 | 4,352 | 7.2e-4 |
| chr11_776793_T_A | chr11:776793 | 5,568 | 1,488 | 8,448 | 2.6e-5 |
| chr11_755604_G_C | chr11:755604 | -5,280 | -1,232 | -5,504 | 6.6e-6 |
| chr11_747350_A_G | chr11:747350 | -5,184 | -880 | -8,192 | 1.3e-5 |
| chr11_747470_C_T | chr11:747470 | 5,184 | 592 | 3,584 | 2.1e-4 |
| chr11_747281_G_A | chr11:747281 | 5,120 | 736 | 256 | 6.6e-6 |
| chr11_747319_G_T | chr11:747319 | 5,120 | 576 | 3,072 | 1.3e-5 |
| chr11_755683_C_T | chr11:755683 | 5,056 | 2,368 | 7,936 | 6.6e-6 |
| chr11_747236_C_A | chr11:747236 | -4,992 | 64 | 2,304 | 6.6e-6 |
| chr11_747184_C_T | chr11:747184 | -4,928 | -608 | -2,560 | 6.6e-6 |
| chr11_747336_G_C | chr11:747336 | -4,800 | -672 | 7,680 | 6.6e-6 |
| chr11_747373_T_C | chr11:747373 | -4,736 | -1,712 | -11,776 | 7.9e-5 |
| chr11_776700_T_A | chr11:776700 | -4,672 | -3,264 | -7,552 | 2.3e-4 |
| chr11_755671_G_A | chr11:755671 | -4,608 | -1,504 | -3,968 | 1.3e-5 |
| chr11_747186_G_C | chr11:747186 | -4,544 | -736 | -3,584 | 6.6e-6 |
| chr11_747299_C_A | chr11:747299 | 4,480 | 544 | 3,584 | 4.5e-4 |
| chr11_747441_C_G | chr11:747441 | 4,416 | -320 | 4,864 | 3.3e-5 |
| chr11_747325_C_A | chr11:747325 | 4,224 | 1,104 | 4,608 | 2.0e-5 |
| chr11_747264_G_C | chr11:747264 | 4,224 | 128 | 768 | 1.3e-5 |
| chr11_765535_T_G | chr11:765535 | 4,208 | 640 | 3,712 | 6.8e-4 |
| chr11_747060_A_T | chr11:747060 | 4,160 | 112 | 2,816 | 2.0e-5 |
| chr11_765396_C_A | chr11:765396 | 4,080 | 3,648 | 6,912 | 6.6e-6 |
| chr11_747635_C_T | chr11:747635 | 3,968 | 752 | 10,240 | 6.6e-6 |
| chr11_747356_G_T | chr11:747356 | 3,968 | 784 | 7,424 | 4.6e-5 |
| chr11_747046_T_C | chr11:747046 | -3,968 | -912 | -4,352 | 2.0e-5 |
| chr11_747406_G_A | chr11:747406 | 3,904 | 672 | 6,912 | 6.6e-6 |
| chr11_747370_G_A | chr11:747370 | 3,840 | 2,368 | 9,728 | 6.6e-6 |
| chr11_748124_A_T | chr11:748124 | 3,776 | 592 | -7,680 | 2.0e-5 |
| chr11_747022_C_A | chr11:747022 | 3,712 | 816 | 13,056 | 6.6e-6 |
| chr11_748128_G_A | chr11:748128 | 3,648 | -272 | -9,984 | 6.6e-6 |
| chr11_755470_G_A | chr11:755470 | 3,600 | 1,888 | 4,480 | 6.6e-6 |
| chr11_747372_C_G | chr11:747372 | -3,520 | -192 | -4,608 | 6.6e-6 |
| chr11_755609_G_A | chr11:755609 | -3,392 | -1,088 | -4,736 | 1.3e-5 |
| chr11_746843_A_C | chr11:746843 | 3,328 | 272 | 5,120 | 1.3e-3 |
| chr11_776702_G_A | chr11:776702 | -3,296 | -2,288 | -7,552 | 1.3e-5 |
| chr11_747424_G_A | chr11:747424 | 3,136 | -208 | 11,008 | 1.3e-5 |
| chr11_765402_G_C | chr11:765402 | -3,072 | -928 | -12,800 | 4.7e-4 |
| chr11_777066_C_T | chr11:777066 | -2,944 | 500 | 7,680 | 6.6e-6 |
| chr11_747294_C_T | chr11:747294 | -2,944 | 1,200 | 6,400 | 2.0e-5 |
| chr11_747315_G_C | chr11:747315 | -2,816 | 1,536 | 12,032 | 1.3e-5 |
| chr11_747364_C_A | chr11:747364 | 2,816 | 960 | 6,656 | 6.6e-6 |
| chr11_776806_C_T | chr11:776806 | -2,816 | -920 | -4,480 | 6.6e-6 |
| chr11_747367_C_T | chr11:747367 | -2,752 | 1,184 | 5,888 | 1.3e-5 |
| chr11_747023_C_G | chr11:747023 | 2,688 | 1,072 | 13,056 | 6.6e-6 |
| chr11_776677_C_G | chr11:776677 | 2,624 | 2,064 | 5,504 | 6.6e-6 |
| chr11_776675_C_T | chr11:776675 | 2,624 | 704 | 4,736 | 6.6e-6 |
| chr11_747674_G_C | chr11:747674 | -2,560 | 144 | 8,448 | 2.0e-5 |
| chr11_776949_G_A | chr11:776949 | -2,464 | -2,168 | -5,248 | 6.8e-4 |
| chr11_776676_C_T | chr11:776676 | 2,432 | 1,232 | 4,224 | 6.6e-6 |
| chr11_748126_G_C | chr11:748126 | 2,368 | -464 | -13,312 | 9.8e-5 |
| chr11_747608_G_A | chr11:747608 | 2,304 | 320 | 5,120 | 1.3e-5 |
| chr11_748192_C_T | chr11:748192 | -2,304 | -624 | -4,352 | 6.6e-6 |
| chr11_746982_A_C | chr11:746982 | 2,176 | 16 | 6,656 | 2.0e-5 |
| chr11_747302_G_T | chr11:747302 | 2,176 | 656 | 4,352 | 6.6e-6 |
| chr11_746711_C_T | chr11:746711 | -2,112 | 320 | -4,096 | 1.3e-5 |
| chr11_747383_G_T | chr11:747383 | 2,048 | 560 | 6,144 | 6.6e-6 |
| chr11_777056_C_A | chr11:777056 | -2,048 | -532 | -4,480 | 6.6e-6 |
| chr11_747375_G_A | chr11:747375 | 1,984 | 832 | 6,656 | 6.6e-6 |
| chr11_755405_A_C | chr11:755405 | 1,944 | 240 | 4,736 | 1.1e-4 |
| chr11_747433_G_A | chr11:747433 | 1,920 | 672 | 10,496 | 6.6e-6 |
| chr11_747471_T_C | chr11:747471 | -1,856 | -560 | -5,120 | 6.6e-6 |
| chr11_746903_G_A | chr11:746903 | -1,856 | -64 | -4,864 | 1.3e-5 |
| chr11_747035_C_T | chr11:747035 | 1,792 | 576 | 11,008 | 6.6e-6 |
| chr11_747435_G_A | chr11:747435 | 1,792 | 784 | 6,144 | 1.3e-5 |
| chr11_747760_G_T | chr11:747760 | 1,792 | 304 | 4,352 | 6.6e-6 |
| chr11_748195_G_C | chr11:748195 | -1,728 | 144 | -6,144 | 1.3e-5 |
| chr11_746987_C_T | chr11:746987 | 1,664 | 432 | 6,912 | 1.3e-5 |
| chr11_747653_C_T | chr11:747653 | 1,600 | 1,040 | 4,864 | 6.6e-6 |
| chr11_747357_C_A | chr11:747357 | 1,536 | 896 | 4,352 | 6.6e-6 |
| chr11_765599_G_A | chr11:765599 | 1,488 | 1,120 | 5,760 | 2.0e-2 |
| chr11_776969_C_A | chr11:776969 | 1,440 | 940 | 4,224 | 6.6e-6 |
| chr11_747070_T_C | chr11:747070 | -1,344 | -656 | -8,960 | 2.0e-5 |
| chr11_747621_A_C | chr11:747621 | -1,344 | -352 | -6,144 | 6.6e-6 |
| chr11_747801_G_T | chr11:747801 | 1,280 | 624 | 8,960 | 1.3e-5 |
| chr11_765797_A_G | chr11:765797 | 1,280 | 288 | 4,864 | 6.6e-6 |
| chr11_747878_G_A | chr11:747878 | 1,280 | 304 | 4,608 | 3.2e-4 |
| chr11_747237_C_A | chr11:747237 | 1,280 | 384 | 4,352 | 6.6e-6 |
| chr11_746849_G_A | chr11:746849 | 1,216 | -1,440 | 7,680 | 2.0e-5 |
| chr11_747062_C_T | chr11:747062 | 1,216 | 96 | 4,864 | 6.6e-6 |
| chr11_747544_C_G | chr11:747544 | 1,216 | 368 | 4,864 | 2.0e-5 |
| chr11_747881_G_C | chr11:747881 | 1,216 | 416 | 4,864 | 6.6e-6 |
| chr11_746985_C_T | chr11:746985 | -1,216 | 448 | 4,608 | 6.6e-6 |
| chr11_747599_G_A | chr11:747599 | 1,152 | 768 | 8,448 | 1.3e-5 |
| chr11_746991_C_T | chr11:746991 | 1,152 | 368 | 6,912 | 6.6e-6 |
| chr11_747639_A_G | chr11:747639 | 1,088 | -336 | -5,376 | 2.6e-5 |
| chr11_747845_G_A | chr11:747845 | 1,024 | 336 | 6,144 | 6.6e-6 |
| chr11_747843_C_G | chr11:747843 | -1,024 | -736 | -5,888 | 6.6e-6 |
| chr11_747495_C_G | chr11:747495 | 1,024 | 112 | 5,376 | 2.6e-5 |
| chr11_747663_G_C | chr11:747663 | 960 | -96 | 6,656 | 6.6e-6 |
| chr11_765400_C_T | chr11:765400 | -960 | 992 | 6,656 | 6.6e-6 |
| chr11_747601_G_T | chr11:747601 | -960 | 640 | 5,632 | 4.7e-4 |
| chr11_747827_C_T | chr11:747827 | 960 | 208 | 4,608 | 6.6e-6 |
| chr11_776728_G_T | chr11:776728 | -960 | -320 | -4,480 | 3.3e-5 |
| chr11_747424_G_T | chr11:747424 | -896 | 224 | 7,424 | 1.5e-4 |
| chr11_747821_G_A | chr11:747821 | 896 | 336 | 6,656 | 6.6e-6 |
| chr11_748143_A_T | chr11:748143 | -896 | -592 | -4,608 | 1.3e-5 |
| chr11_747630_G_A | chr11:747630 | 832 | 432 | 7,936 | 6.6e-6 |
| chr11_776753_G_A | chr11:776753 | 832 | 144 | -5,120 | 1.5e-4 |
| chr11_746992_T_C | chr11:746992 | 832 | -352 | -4,096 | 4.5e-1 |
| chr11_747600_G_T | chr11:747600 | -768 | 768 | 9,984 | 6.6e-6 |
| chr11_747765_G_A | chr11:747765 | 768 | 416 | 6,912 | 6.6e-6 |
| chr11_747387_C_T | chr11:747387 | 768 | 992 | 6,656 | 2.0e-5 |
| chr11_747139_G_A | chr11:747139 | -768 | 368 | 4,608 | 2.0e-5 |
| chr11_765401_C_T | chr11:765401 | 752 | 1,824 | 6,912 | 6.6e-6 |
| chr11_747809_A_G | chr11:747809 | -704 | -416 | -6,144 | 6.6e-6 |
| chr11_776825_G_T | chr11:776825 | -672 | -952 | -4,224 | 6.6e-5 |
| chr11_765406_C_T | chr11:765406 | 656 | 672 | 4,992 | 3.3e-5 |
| chr11_776752_C_A | chr11:776752 | -640 | -464 | -5,632 | 6.6e-6 |
| chr11_765896_A_G | chr11:765896 | -592 | -448 | -8,320 | 6.6e-6 |
| chr11_747064_C_T | chr11:747064 | 576 | 320 | 5,632 | 6.6e-6 |
| chr11_747787_G_T | chr11:747787 | -576 | 272 | 4,352 | 6.6e-6 |
| chr11_747647_G_A | chr11:747647 | 448 | 368 | 4,864 | 6.6e-6 |
| chr11_747037_C_T | chr11:747037 | -384 | 720 | 7,936 | 6.6e-6 |
| chr11_747674_G_T | chr11:747674 | -384 | 256 | 6,656 | 6.6e-6 |
| chr11_747830_G_A | chr11:747830 | 384 | 336 | 5,120 | 2.4e-4 |
| chr11_747838_A_C | chr11:747838 | -256 | -464 | -8,704 | 6.6e-6 |
| chr11_747033_C_G | chr11:747033 | 256 | 848 | 8,448 | 6.6e-6 |
| chr11_747213_T_G | chr11:747213 | -256 | -624 | -7,168 | 5.3e-5 |
| chr11_747033_C_T | chr11:747033 | 256 | 752 | 6,400 | 6.6e-6 |
| chr11_746970_C_T | chr11:746970 | -256 | 416 | 4,864 | 6.6e-6 |
| chr11_776728_G_A | chr11:776728 | -256 | -416 | -4,864 | 1.3e-5 |
| chr11_747426_C_T | chr11:747426 | -256 | 480 | 4,352 | 2.6e-5 |
| chr11_747432_C_T | chr11:747432 | 128 | 1,280 | 8,704 | 2.6e-5 |
| chr11_776715_C_T | chr11:776715 | 128 | -368 | -5,504 | 6.6e-6 |
| chr11_747438_C_T | chr11:747438 | -128 | 912 | 5,120 | 6.6e-6 |
| chr11_747904_C_T | chr11:747904 | 128 | 80 | 4,608 | 2.0e-5 |
| chr11_765893_G_A | chr11:765893 | -64 | -384 | -8,320 | 6.6e-6 |
| chr11_747632_C_T | chr11:747632 | -64 | 560 | 7,168 | 6.6e-6 |
| chr11_747874_G_C | chr11:747874 | 64 | 352 | 6,400 | 4.6e-5 |
| chr11_748235_C_T | chr11:748235 | -64 | -320 | -4,608 | 6.6e-6 |
| chr11_765407_C_G | chr11:765407 | -32 | -128 | 4,736 | 4.6e-5 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.