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TTC39C-AS1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near TTC39C-AS1
chr18:23,894,214..24,115,460, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr18_23902675_G_C | chr18:23902675 | 0.857 | 0.860 | 1.000 | — |
| chr18_23902559_C_G | chr18:23902559 | 0.840 | 0.801 | 0.841 | — |
| chr18_23902715_A_T | chr18:23902715 | 0.547 | 0.571 | 0.429 | — |
| chr18_23902573_C_A | chr18:23902573 | 0.477 | 0.600 | 0.324 | — |
| chr18_23902570_A_T | chr18:23902570 | 0.428 | 0.533 | 0.344 | — |
| chr18_23902715_A_C | chr18:23902715 | 0.392 | 0.419 | 0.318 | — |
| chr18_23902559_C_T | chr18:23902559 | 0.354 | 0.348 | 0.341 | 0.0046% |
| chr18_23902711_A_G | chr18:23902711 | 0.347 | 0.371 | 0.324 | <0.001% |
| chr18_23902615_C_A | chr18:23902615 | 0.323 | 0.434 | 0.394 | — |
| chr18_23902586_G_C | chr18:23902586 | -0.298 | -0.317 | -0.400 | — |
| chr18_23902586_G_A | chr18:23902586 | -0.286 | -0.296 | -0.403 | — |
| chr18_23902570_A_C | chr18:23902570 | 0.276 | 0.263 | 0.168 | — |
| chr18_23902595_C_A | chr18:23902595 | -0.275 | -0.350 | -0.403 | — |
| chr18_23902586_G_T | chr18:23902586 | -0.273 | -0.287 | -0.362 | — |
| chr18_23902595_C_G | chr18:23902595 | -0.271 | -0.349 | -0.379 | — |
| chr18_23902576_C_T | chr18:23902576 | 0.268 | 0.401 | 0.209 | — |
| chr18_23902572_G_A | chr18:23902572 | 0.266 | 0.363 | 0.124 | — |
| chr18_23902585_G_C | chr18:23902585 | -0.260 | -0.277 | -0.365 | — |
| chr18_23902595_C_T | chr18:23902595 | -0.260 | -0.339 | -0.400 | — |
| chr18_23902635_G_C | chr18:23902635 | 0.256 | 0.294 | 0.212 | — |
| chr18_23902585_G_T | chr18:23902585 | -0.254 | -0.258 | -0.382 | — |
| chr18_23902587_C_G | chr18:23902587 | -0.247 | -0.286 | -0.365 | — |
| chr18_23902587_C_T | chr18:23902587 | -0.246 | -0.284 | -0.400 | — |
| chr18_23902585_G_A | chr18:23902585 | -0.243 | -0.255 | -0.371 | — |
| chr18_23902635_G_T | chr18:23902635 | 0.242 | 0.299 | 0.209 | — |
| chr18_23902584_T_C | chr18:23902584 | -0.232 | -0.258 | -0.232 | — |
| chr18_23902562_A_C | chr18:23902562 | -0.228 | -0.256 | -0.274 | — |
| chr18_23902683_A_G | chr18:23902683 | 0.215 | 0.231 | 0.212 | — |
| chr18_23902554_G_A | chr18:23902554 | 0.215 | 0.236 | 0.194 | — |
| chr18_23902593_T_G | chr18:23902593 | 0.211 | 0.274 | 0.350 | — |
| chr18_23902563_A_C | chr18:23902563 | -0.208 | -0.242 | -0.250 | — |
| chr18_23902556_A_T | chr18:23902556 | 0.201 | 0.225 | 0.171 | — |
| chr18_23902594_C_G | chr18:23902594 | -0.198 | -0.251 | -0.259 | <0.001% |
| chr18_23902603_C_G | chr18:23902603 | -0.197 | -0.216 | -0.247 | — |
| chr18_23902562_A_T | chr18:23902562 | -0.196 | -0.208 | -0.218 | — |
| chr18_23902620_T_G | chr18:23902620 | -0.196 | -0.242 | -0.226 | — |
| chr18_23902616_C_A | chr18:23902616 | 0.193 | 0.203 | 0.112 | — |
| chr18_23902675_G_A | chr18:23902675 | 0.192 | 0.234 | 0.291 | — |
| chr18_23902625_T_C | chr18:23902625 | -0.188 | -0.209 | -0.221 | — |
| chr18_23902561_C_G | chr18:23902561 | 0.187 | 0.223 | 0.194 | — |
| chr18_23902553_A_C | chr18:23902553 | 0.186 | 0.185 | 0.253 | — |
| chr18_23902635_G_A | chr18:23902635 | 0.186 | 0.228 | 0.159 | — |
| chr18_23902746_G_C | chr18:23902746 | 0.181 | 0.183 | 0.159 | — |
| chr18_23902620_T_A | chr18:23902620 | -0.178 | -0.228 | -0.206 | — |
| chr18_23902584_T_A | chr18:23902584 | -0.176 | -0.197 | -0.188 | — |
| chr18_23902578_G_T | chr18:23902578 | -0.176 | -0.211 | -0.226 | — |
| chr18_23902578_G_C | chr18:23902578 | -0.172 | -0.209 | -0.191 | — |
| chr18_23902548_A_C | chr18:23902548 | 0.171 | 0.156 | 0.124 | — |
| chr18_23902690_T_C | chr18:23902690 | 0.171 | 0.180 | 0.159 | — |
| chr18_23902693_A_G | chr18:23902693 | 0.171 | 0.168 | 0.168 | — |
| chr18_23902550_G_T | chr18:23902550 | 0.166 | 0.198 | 0.141 | — |
| chr18_23902563_A_T | chr18:23902563 | -0.166 | -0.209 | -0.194 | — |
| chr18_23902596_A_G | chr18:23902596 | -0.166 | -0.192 | -0.162 | — |
| chr18_23902531_G_A | chr18:23902531 | 0.160 | 0.227 | 0.112 | — |
| chr18_23902676_A_C | chr18:23902676 | 0.157 | 0.195 | 0.171 | — |
| chr18_23902555_C_A | chr18:23902555 | -0.153 | -0.190 | -0.253 | — |
| chr18_23902549_A_C | chr18:23902549 | 0.152 | 0.166 | 0.132 | — |
| chr18_23902613_T_G | chr18:23902613 | -0.151 | -0.188 | -0.171 | — |
| chr18_23902567_T_G | chr18:23902567 | 0.149 | 0.099 | 0.103 | 0.0013% |
| chr18_23902583_C_A | chr18:23902583 | -0.149 | -0.189 | -0.212 | — |
| chr18_23902575_T_C | chr18:23902575 | -0.146 | -0.170 | -0.203 | — |
| chr18_23902682_T_A | chr18:23902682 | -0.146 | -0.135 | -0.106 | — |
| chr18_23902695_T_A | chr18:23902695 | 0.146 | 0.155 | 0.112 | — |
| chr18_23902561_C_A | chr18:23902561 | 0.146 | 0.161 | 0.141 | — |
| chr18_23902578_G_A | chr18:23902578 | -0.143 | -0.168 | -0.159 | — |
| chr18_23902587_C_A | chr18:23902587 | -0.128 | -0.140 | -0.253 | — |
| chr18_23902594_C_A | chr18:23902594 | -0.143 | -0.184 | -0.241 | — |
| chr18_23902625_T_A | chr18:23902625 | -0.142 | -0.188 | -0.171 | 0.0013% |
| chr18_23902640_T_A | chr18:23902640 | 0.142 | 0.109 | 0.124 | — |
| chr18_23902667_T_A | chr18:23902667 | 0.141 | 0.157 | 0.135 | — |
| chr18_23902694_A_T | chr18:23902694 | 0.141 | 0.127 | 0.135 | — |
| chr18_23902695_T_C | chr18:23902695 | 0.141 | 0.173 | 0.159 | — |
| chr18_23902549_A_T | chr18:23902549 | 0.140 | 0.141 | 0.132 | — |
| chr18_23902491_C_G | chr18:23902491 | 0.111 | 0.114 | 0.244 | — |
| chr18_23902715_A_G | chr18:23902715 | 0.137 | 0.147 | 0.135 | — |
| chr18_23902618_T_C | chr18:23902618 | -0.136 | -0.129 | -0.047 | — |
| chr18_23902603_C_T | chr18:23902603 | -0.135 | -0.154 | -0.218 | — |
| chr18_23902657_T_C | chr18:23902657 | 0.133 | 0.129 | 0.168 | — |
| chr18_23902751_G_T | chr18:23902751 | 0.133 | 0.173 | 0.112 | — |
| chr18_23902617_G_T | chr18:23902617 | -0.132 | -0.133 | -0.185 | — |
| chr18_23902730_T_G | chr18:23902730 | 0.132 | 0.114 | 0.091 | — |
| chr18_23902620_T_C | chr18:23902620 | -0.131 | -0.164 | -0.097 | — |
| chr18_23902647_T_G | chr18:23902647 | -0.130 | -0.169 | -0.124 | — |
| chr18_23902682_T_G | chr18:23902682 | -0.128 | -0.129 | -0.079 | — |
| chr18_23902616_C_T | chr18:23902616 | 0.127 | 0.110 | 0.050 | 0.0026% |
| chr18_23902546_G_A | chr18:23902546 | 0.126 | 0.047 | 0.035 | — |
| chr18_23902627_T_A | chr18:23902627 | -0.126 | -0.150 | -0.076 | — |
| chr18_23902577_T_C | chr18:23902577 | -0.125 | -0.146 | -0.124 | — |
| chr18_23902677_T_A | chr18:23902677 | 0.125 | 0.150 | 0.150 | — |
| chr18_23902682_T_C | chr18:23902682 | -0.125 | -0.107 | -0.062 | — |
| chr18_23902499_C_A | chr18:23902499 | -0.123 | -0.129 | -0.141 | — |
| chr18_23902603_C_A | chr18:23902603 | -0.101 | -0.128 | -0.215 | — |
| chr18_23902563_A_G | chr18:23902563 | 0.119 | 0.135 | 0.135 | — |
| chr18_23902683_A_C | chr18:23902683 | -0.118 | -0.145 | -0.097 | — |
| chr18_23902655_G_T | chr18:23902655 | 0.117 | 0.157 | 0.138 | — |
| chr18_23902650_T_A | chr18:23902650 | 0.116 | 0.102 | 0.097 | — |
| chr18_23902668_G_A | chr18:23902668 | 0.116 | 0.107 | 0.050 | — |
| chr18_23902573_C_G | chr18:23902573 | -0.114 | -0.145 | -0.182 | — |
| chr18_23902621_G_T | chr18:23902621 | -0.114 | -0.160 | -0.188 | <0.001% |
| chr18_23902648_T_A | chr18:23902648 | 0.113 | 0.080 | 0.079 | — |
| chr18_23902691_A_C | chr18:23902691 | -0.113 | -0.160 | -0.076 | — |
| chr18_23902669_G_A | chr18:23902669 | 0.112 | 0.152 | 0.100 | — |
| chr18_23902689_A_T | chr18:23902689 | 0.112 | 0.117 | 0.094 | — |
| chr18_23902606_T_G | chr18:23902606 | 0.111 | 0.110 | 0.115 | — |
| chr18_23902623_C_T | chr18:23902623 | -0.111 | -0.146 | -0.174 | <0.001% |
| chr18_23902702_G_A | chr18:23902702 | 0.111 | 0.107 | 0.071 | — |
| chr18_23902611_G_C | chr18:23902611 | -0.110 | -0.151 | -0.138 | — |
| chr18_23902665_G_A | chr18:23902665 | 0.110 | 0.137 | 0.100 | 0.0039% |
| chr18_23902677_T_C | chr18:23902677 | 0.110 | 0.107 | 0.141 | — |
| chr18_23902623_C_G | chr18:23902623 | -0.109 | -0.183 | -0.159 | <0.001% |
| chr18_23902689_A_C | chr18:23902689 | 0.109 | 0.112 | 0.100 | — |
| chr18_23902594_C_T | chr18:23902594 | -0.099 | -0.123 | -0.191 | — |
| chr18_23902676_A_T | chr18:23902676 | 0.108 | 0.129 | 0.126 | <0.001% |
| chr18_23902607_C_T | chr18:23902607 | -0.107 | -0.121 | -0.162 | — |
| chr18_23902683_A_T | chr18:23902683 | -0.107 | -0.104 | -0.094 | — |
| chr18_23902668_G_C | chr18:23902668 | 0.106 | 0.099 | 0.088 | — |
| chr18_23902615_C_T | chr18:23902615 | 0.045 | 0.102 | 0.185 | — |
| chr18_23902678_G_T | chr18:23902678 | 0.105 | 0.124 | 0.121 | — |
| chr18_23902577_T_G | chr18:23902577 | -0.104 | -0.131 | -0.076 | — |
| chr18_23902677_T_G | chr18:23902677 | 0.104 | 0.127 | 0.118 | — |
| chr18_23902577_T_A | chr18:23902577 | -0.101 | -0.122 | -0.085 | — |
| chr18_23902627_T_G | chr18:23902627 | -0.101 | -0.112 | -0.021 | — |
| chr18_23902631_T_C | chr18:23902631 | 0.101 | 0.096 | 0.156 | — |
| chr18_23902579_A_T | chr18:23902579 | -0.100 | -0.124 | -0.106 | — |
| chr18_23902601_G_C | chr18:23902601 | -0.100 | -0.088 | -0.100 | — |
| chr18_23902625_T_G | chr18:23902625 | -0.100 | -0.108 | -0.079 | — |
| chr18_23902700_T_A | chr18:23902700 | -0.100 | -0.135 | -0.097 | — |
| chr18_23902569_T_C | chr18:23902569 | 0.099 | 0.096 | 0.079 | — |
| chr18_23902663_C_A | chr18:23902663 | -0.098 | -0.122 | -0.118 | — |
| chr18_23902553_A_T | chr18:23902553 | -0.097 | -0.095 | -0.124 | — |
| chr18_23902589_G_T | chr18:23902589 | -0.081 | -0.084 | -0.171 | — |
| chr18_23902571_G_T | chr18:23902571 | -0.096 | -0.140 | -0.150 | — |
| chr18_23902579_A_C | chr18:23902579 | -0.095 | -0.124 | -0.059 | — |
| chr18_23902553_A_G | chr18:23902553 | -0.094 | -0.090 | -0.100 | — |
| chr18_23902602_G_C | chr18:23902602 | -0.094 | -0.090 | -0.097 | — |
| chr18_23902573_C_T | chr18:23902573 | -0.061 | -0.070 | -0.165 | — |
| chr18_23902574_C_T | chr18:23902574 | -0.086 | -0.110 | -0.165 | <0.001% |
| chr18_23902610_A_G | chr18:23902610 | -0.093 | -0.127 | -0.100 | — |
| chr18_23902632_C_T | chr18:23902632 | -0.093 | -0.090 | -0.097 | — |
| chr18_23902542_C_A | chr18:23902542 | 0.092 | 0.261 | 0.159 | — |
| chr18_23902529_T_A | chr18:23902529 | -0.092 | -0.102 | -0.124 | — |
| chr18_23902646_G_C | chr18:23902646 | -0.092 | -0.127 | -0.109 | — |
| chr18_23902698_T_A | chr18:23902698 | 0.092 | 0.074 | 0.053 | — |
| chr18_23902634_A_C | chr18:23902634 | -0.091 | -0.113 | 0.006 | — |
| chr18_23902539_T_G | chr18:23902539 | -0.090 | -0.115 | -0.071 | — |
| chr18_23902564_C_G | chr18:23902564 | 0.090 | 0.084 | 0.062 | — |
| chr18_23902627_T_C | chr18:23902627 | -0.090 | -0.084 | -0.056 | — |
| chr18_23902551_G_C | chr18:23902551 | 0.089 | 0.090 | 0.100 | — |
| chr18_23902582_T_G | chr18:23902582 | -0.089 | -0.114 | -0.015 | — |
| chr18_23902687_A_C | chr18:23902687 | -0.089 | -0.102 | -0.053 | — |
| chr18_23902674_T_C | chr18:23902674 | 0.088 | 0.099 | 0.097 | — |
| chr18_23902515_A_G | chr18:23902515 | 0.087 | 0.118 | 0.118 | — |
| chr18_23902622_A_G | chr18:23902622 | -0.087 | -0.132 | -0.065 | — |
| chr18_23902694_A_C | chr18:23902694 | 0.087 | 0.096 | 0.106 | — |
| chr18_23902651_C_A | chr18:23902651 | -0.087 | -0.084 | -0.079 | — |
| chr18_23902624_C_G | chr18:23902624 | -0.086 | -0.164 | -0.118 | — |
| chr18_23902624_C_T | chr18:23902624 | -0.086 | -0.089 | -0.106 | <0.001% |
| chr18_23902671_T_C | chr18:23902671 | 0.086 | 0.086 | 0.082 | — |
| chr18_23902492_C_A | chr18:23902492 | 0.034 | 0.037 | 0.150 | — |
| chr18_23902581_C_G | chr18:23902581 | -0.085 | -0.108 | -0.094 | — |
| chr18_23902629_G_C | chr18:23902629 | -0.085 | -0.115 | -0.115 | — |
| chr18_23902711_A_C | chr18:23902711 | 0.085 | 0.089 | 0.071 | — |
| chr18_23902580_A_G | chr18:23902580 | -0.084 | -0.109 | -0.026 | — |
| chr18_23902626_C_T | chr18:23902626 | 0.084 | 0.090 | 0.112 | — |
| chr18_23902695_T_G | chr18:23902695 | 0.084 | 0.104 | 0.097 | — |
| chr18_23902480_C_A | chr18:23902480 | 0.080 | 0.076 | 0.147 | — |
| chr18_23902609_C_A | chr18:23902609 | -0.082 | -0.110 | -0.138 | — |
| chr18_23902515_A_C | chr18:23902515 | 0.082 | 0.109 | 0.100 | — |
| chr18_23902540_G_C | chr18:23902540 | -0.082 | -0.071 | -0.103 | — |
| chr18_23902569_T_G | chr18:23902569 | 0.082 | 0.084 | 0.047 | — |
| chr18_23902574_C_A | chr18:23902574 | -0.081 | -0.113 | -0.144 | — |
| chr18_23902574_C_G | chr18:23902574 | -0.082 | -0.115 | -0.132 | — |
| chr18_23902599_C_G | chr18:23902599 | -0.081 | -0.082 | -0.088 | — |
| chr18_23902651_C_T | chr18:23902651 | -0.081 | -0.086 | -0.100 | — |
| chr18_23902666_A_C | chr18:23902666 | 0.081 | 0.081 | 0.085 | — |
| chr18_23902676_A_G | chr18:23902676 | 0.081 | 0.117 | 0.097 | — |
| chr18_23902611_G_A | chr18:23902611 | -0.079 | -0.115 | -0.118 | — |
| chr18_23902583_C_G | chr18:23902583 | -0.078 | -0.100 | -0.103 | — |
| chr18_23902699_T_G | chr18:23902699 | 0.078 | 0.079 | 0.038 | — |
| chr18_23902690_T_G | chr18:23902690 | 0.077 | 0.094 | 0.088 | 0.0020% |
| chr18_23902589_G_A | chr18:23902589 | -0.068 | -0.067 | -0.135 | — |
| chr18_23902597_G_C | chr18:23902597 | -0.063 | -0.081 | -0.135 | — |
| chr18_23902619_G_A | chr18:23902619 | -0.077 | -0.107 | -0.124 | <0.001% |
| chr18_23902626_C_G | chr18:23902626 | -0.076 | -0.095 | -0.071 | — |
| chr18_23902632_C_A | chr18:23902632 | -0.076 | -0.098 | -0.100 | — |
| chr18_23902642_C_A | chr18:23902642 | -0.074 | -0.121 | -0.097 | — |
| chr18_23902589_G_C | chr18:23902589 | -0.070 | -0.076 | -0.129 | — |
| chr18_23902641_G_A | chr18:23902641 | -0.073 | -0.103 | -0.103 | <0.001% |
| chr18_23902697_T_G | chr18:23902697 | 0.073 | 0.069 | 0.068 | — |
| chr18_23902580_A_T | chr18:23902580 | -0.072 | -0.084 | -0.071 | — |
| chr18_23902679_G_C | chr18:23902679 | -0.072 | -0.084 | -0.062 | — |
| chr18_23902540_G_A | chr18:23902540 | -0.072 | -0.072 | -0.097 | — |
| chr18_23902558_A_G | chr18:23902558 | 0.027 | 0.042 | 0.126 | — |
| chr18_23902549_A_G | chr18:23902549 | -0.071 | -0.082 | -0.118 | — |
| chr18_23902564_C_A | chr18:23902564 | -0.071 | -0.088 | -0.079 | — |
| chr18_23902606_T_C | chr18:23902606 | -0.071 | -0.096 | -0.085 | — |
| chr18_23902687_A_T | chr18:23902687 | -0.071 | -0.086 | -0.047 | — |
| chr18_23902691_A_T | chr18:23902691 | -0.071 | -0.119 | -0.053 | — |
| chr18_23902693_A_C | chr18:23902693 | 0.071 | 0.063 | 0.103 | — |
| chr18_23902500_T_C | chr18:23902500 | -0.070 | -0.076 | -0.065 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.