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UPP1

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near UPP1

chr7:47,988,602..48,208,736, gene body plus 100 kb. Showing the strongest 200 by effect size.

VariantPosition PXR FXR AhR AF
chr7_48083353_G_Achr7:4808335324,5765,66424,576—   
chr7_48083274_T_Cchr7:4808327421,5686,72018,048—   
chr7_48083360_T_Gchr7:4808336014,3367,4569,856—   
chr7_48083257_G_Achr7:4808325711,0721,66414,720—   
chr7_48083313_T_Achr7:48083313-10,240-3,328-7,424—   
chr7_48083313_T_Gchr7:48083313-10,176-3,552-6,528—   
chr7_48083337_G_Cchr7:480833379,1843,7769,152—   
chr7_48083396_T_Cchr7:480833968,6081,5361,920—   
chr7_48083313_T_Cchr7:48083313-7,840-3,072-5,248—   
chr7_48083274_T_Achr7:480832747,0722,8167,616—   
chr7_48083273_G_Tchr7:48083273-7,072-2,176-6,464—   
chr7_48083329_T_Gchr7:480833296,4002,6886,528—   
chr7_48083281_C_Achr7:48083281-6,240-1,408-6,400—   
chr7_48083315_A_Cchr7:48083315-6,144-2,176-2,752—   
chr7_48083281_C_Tchr7:48083281-5,888-1,408-5,376—   
chr7_48083283_C_Achr7:480832835,8882,7525,440—   
chr7_48083317_C_Gchr7:48083317-5,792-4,064-3,456—   
chr7_48083315_A_Gchr7:48083315-5,632-2,592-2,624—   
chr7_48083273_G_Cchr7:48083273-5,376-1,312-3,328—   
chr7_48083314_G_Tchr7:48083314-5,312-3,328-3,712—   
chr7_48083280_G_Cchr7:48083280-5,184-1,056-5,632—   
chr7_48083321_G_Tchr7:48083321-5,184-1,728-4,224—   
chr7_48083281_C_Gchr7:48083281-5,120-1,440-4,992—   
chr7_48083318_C_Achr7:48083318-4,928-2,400-3,136—   
chr7_48083303_G_Tchr7:480833034,8647682,688—   
chr7_48083314_G_Cchr7:48083314-4,832-3,296-2,368—   
chr7_48083263_A_Cchr7:480832634,7682,2085,952—   
chr7_48083318_C_Gchr7:48083318-4,736-2,432-1,152—   
chr7_48083328_A_Cchr7:480833284,6401,0886,400—   
chr7_48083327_A_Tchr7:480833274,6404804,288—   
chr7_48083358_T_Cchr7:480833584,6409924,160—   
chr7_48083316_C_Gchr7:48083316-4,608-3,104-3,648—   
chr7_48083317_C_Tchr7:48083317-4,608-3,008-3,584—   
chr7_48083296_G_Tchr7:48083296-4,544-736-4,544—   
chr7_48083311_A_Tchr7:480833114,5122,7842,432—   
chr7_48083315_A_Tchr7:48083315-4,512-2,304-2,560—   
chr7_48083321_G_Cchr7:48083321-4,448-1,632-4,416—   
chr7_48083280_G_Achr7:48083280-4,384-928-4,672—   
chr7_48083339_A_Tchr7:480833394,2881,9523,136—   
chr7_48083326_A_Tchr7:480833264,2241,3122,432—   
chr7_48083262_G_Cchr7:480832624,1288963,648—   
chr7_48083309_C_Achr7:480833094,0961,536832—   
chr7_48083320_T_Cchr7:48083320-4,096-1,728-4,096—   
chr7_48083317_C_Achr7:48083317-4,064-1,056-2,432—   
chr7_48083285_G_Tchr7:48083285-4,032-352-4,672—   
chr7_48083359_A_Cchr7:480833594,0324802,624—   
chr7_48083360_T_Achr7:480833604,0321,5363,264—   
chr7_48083307_G_Cchr7:48083307-3,968-1,376-2,752—   
chr7_48083314_G_Achr7:48083314-3,968-2,208-3,328—   
chr7_48083353_G_Cchr7:480833533,9041286,016—   
chr7_48083359_A_Gchr7:480833593,9049603,648—   
chr7_48083296_G_Cchr7:48083296-3,872-544-2,176—   
chr7_48083374_C_Achr7:480833743,840-1605,824—   
chr7_48083265_G_Achr7:480832653,7761,3441,216—   
chr7_48083272_G_Tchr7:48083272-3,776-768-2,432—   
chr7_48083273_G_Achr7:48083273-3,776-864-3,776—   
chr7_48083339_A_Cchr7:480833393,7761,4722,944—   
chr7_48083264_T_Cchr7:480832643,7449284,864—   
chr7_48083285_G_Cchr7:48083285-3,712-608-3,328—   
chr7_48083287_C_Tchr7:480832873,7121,696-1,344—   
chr7_48083357_A_Cchr7:48083357-3,680-992-2,240—   
chr7_48083362_G_Achr7:480833623,584800960—   
chr7_48083357_A_Tchr7:48083357-3,552-960-2,688—   
chr7_48083312_A_Tchr7:480833123,5201,7603,584—   
chr7_48083265_G_Tchr7:480832653,5201,3761,344—   
chr7_48083284_A_Cchr7:48083284-3,520-928-1,856—   
chr7_48083316_C_Tchr7:48083316-3,520-2,464-2,752—   
chr7_48083280_G_Tchr7:48083280-3,456-992-6,208—   
chr7_48083271_T_Gchr7:48083271-3,456-832-1,536—   
chr7_48083386_G_Tchr7:480833863,3927363,072—   
chr7_48083272_G_Achr7:48083272-3,360-1,056-2,304—   
chr7_48083271_T_Cchr7:48083271-3,296-480-704—   
chr7_48083310_C_Achr7:48083310-3,296-1,216-2,176—   
chr7_48083251_A_Gchr7:48083251-3,232-480-2,944—   
chr7_48083268_T_Achr7:480832683,2004802,048—   
chr7_48083310_C_Gchr7:48083310-3,200-1,376-1,728—   
chr7_48083279_T_Gchr7:48083279-3,168-1,056-4,032—   
chr7_48083300_G_Cchr7:48083300-3,168-192-4,032—   
chr7_48083297_G_Achr7:48083297-3,168-384-3,904—   
chr7_48083363_C_Gchr7:48083363-3,168-672-2,496—   
chr7_48083409_A_Gchr7:48083409-3,136-832-384—   
chr7_48083304_C_Gchr7:48083304-3,104-96-3,840—   
chr7_48083282_C_Gchr7:48083282-3,104-384-2,432—   
chr7_48083282_C_Tchr7:48083282-3,072-704-3,776—   
chr7_48083284_A_Tchr7:48083284-3,072-384-2,880—   
chr7_48083340_A_Tchr7:480833403,0729921,728—   
chr7_48083321_G_Achr7:48083321-3,040-1,024-3,008—   
chr7_48083328_A_Tchr7:480833283,0081,1843,328—   
chr7_48083296_G_Achr7:48083296-3,008160-960—   
chr7_48083423_T_Gchr7:480834233,0086402,048—   
chr7_48083304_C_Achr7:48083304-2,976-32-3,840—   
chr7_48083298_G_Achr7:48083298-2,944-672-4,288—   
chr7_48083357_A_Gchr7:48083357-2,944-736-2,112—   
chr7_48083307_G_Achr7:48083307-2,880-800-3,840—   
chr7_48083279_T_Cchr7:48083279-2,880-960-2,240—   
chr7_48083327_A_Gchr7:480833272,8481923,904—   
chr7_48083297_G_Cchr7:48083297-2,784-672-2,560—   
chr7_48083308_G_Achr7:480833082,7848641,536—   
chr7_48083265_G_Cchr7:480832652,7207042,176—   
chr7_48083279_T_Achr7:48083279-2,656-864-4,608—   
chr7_48083289_T_Gchr7:480832892,6562,6882,624—   
chr7_48083307_G_Tchr7:48083307-2,624-1,024-2,432—   
chr7_48083291_A_Tchr7:480832912,5925122,048—   
chr7_48083316_C_Achr7:48083316-2,592-2,016-2,048—   
chr7_48083322_T_Cchr7:48083322-2,592-1,280-1,728—   
chr7_48083257_G_Cchr7:48083257-2,528-832-3,072—   
chr7_48083260_C_Achr7:48083260-2,528-384-2,624—   
chr7_48083300_G_Achr7:48083300-2,496-64-4,544—   
chr7_48083476_G_Cchr7:480834762,4961,280384—   
chr7_48083263_A_Tchr7:480832632,4641,0563,200—   
chr7_48083262_G_Tchr7:48083262-2,464-480-2,496—   
chr7_48083283_C_Tchr7:48083283-2,432-864-960—   
chr7_48083337_G_Achr7:48083337-2,432-384-1,216—   
chr7_48083297_G_Tchr7:48083297-2,400-416-3,456—   
chr7_48083282_C_Achr7:48083282-2,400-256-960—   
chr7_48083304_C_Tchr7:48083304-2,368-96-4,352—   
chr7_48083256_G_Cchr7:48083256-2,368-608-2,176—   
chr7_48083306_T_Achr7:480833062,3681,3761,664—   
chr7_48083393_T_Gchr7:480833932,3686721,216—   
chr7_48083303_G_Cchr7:48083303-2,336768-1,280—   
chr7_48083305_A_Gchr7:48083305-2,336-544-576—   
chr7_48083322_T_Gchr7:480833222,3361,2482,240—   
chr7_48083325_C_Achr7:48083325-2,336-960-2,304—   
chr7_48083362_G_Tchr7:480833622,3361,024896—   
chr7_48083257_G_Tchr7:48083257-2,304-864-4,416—   
chr7_48083271_T_Achr7:48083271-2,304-96-1,152—   
chr7_48083286_T_Cchr7:48083286-2,304-704-1,984—   
chr7_48083355_T_Achr7:48083355-2,272-480-1,216—   
chr7_48083302_G_Cchr7:48083302-2,24032-1,856—   
chr7_48083217_T_Gchr7:480832172,2085122,688—   
chr7_48083361_G_Achr7:48083361-2,208-256-1,664—   
chr7_48083285_G_Achr7:48083285-2,176416-3,136—   
chr7_48083459_A_Gchr7:48083459-2,176-704-2,688—   
chr7_48083305_A_Tchr7:480833052,1762242,176—   
chr7_48083324_T_Gchr7:48083324-2,176-1,216512—   
chr7_48083252_G_Achr7:480832522,1444162,240—   
chr7_48083409_A_Tchr7:48083409-2,112-320-128—   
chr7_48083323_G_Tchr7:48083323-2,080-480-1,536—   
chr7_48083353_G_Tchr7:480833532,048-4483,648—   
chr7_48083300_G_Tchr7:48083300-2,048160-3,328—   
chr7_48083320_T_Achr7:48083320-2,048-832-1,792—   
chr7_48083301_C_Tchr7:480833012,016-1922,688—   
chr7_48083345_T_Gchr7:480833451,9841,5043,456—   
chr7_48083359_A_Tchr7:480833591,9848322,432—   
chr7_48083197_T_Gchr7:480831971,9526402,112—   
chr7_48083342_A_Tchr7:480833421,9201,0883,072—   
chr7_48083459_A_Tchr7:48083459-1,920-704-2,560—   
chr7_48083302_G_Achr7:48083302-1,824576-3,776—   
chr7_48083302_G_Tchr7:48083302-1,824384-3,392—   
chr7_48083459_A_Cchr7:48083459-1,792-608-2,304—   
chr7_48083291_A_Cchr7:480832911,7601,8564,416—   
chr7_48083329_T_Achr7:480833291,76004,416—   
chr7_48083342_A_Cchr7:480833421,6969283,072—   
chr7_48083283_C_Gchr7:48083283-1,664-2884,608—   
chr7_48083324_T_Achr7:480833241,664-4483,328—   
chr7_48083299_T_Gchr7:48083299-1,6002,240-2,752—   
chr7_48083319_C_Tchr7:480833191,5684802,048—   
chr7_48083308_G_Tchr7:48083308-1,536-1,120-3,136—   
chr7_48083477_A_Cchr7:480834771,5364482,304—   
chr7_48083258_C_Tchr7:48083258-1,5040-2,176—   
chr7_48083335_G_Cchr7:480833351,4089922,240—   
chr7_48083410_A_Cchr7:480834101,4088962,112—   
chr7_48083323_G_Achr7:48083323-1,408-480-2,048—   
chr7_48083330_C_Gchr7:480833301,3768642,432—   
chr7_48083461_G_Tchr7:48083461-1,344-608-2,304—   
chr7_48083240_C_Achr7:480832401,280-256-3,200—   
chr7_48083363_C_Achr7:48083363-1,280-480-3,072—   
chr7_48083240_C_Gchr7:480832401,248-192-4,608—   
chr7_48083256_G_Achr7:48083256-1,248-96-2,496—   
chr7_48083383_A_Cchr7:480833831,2486082,304—   
chr7_48083293_C_Gchr7:48083293-1,2489922,112—   
chr7_48083306_T_Cchr7:480833061,2165123,328—   
chr7_48083299_T_Cchr7:480832991,152643,456—   
chr7_48083418_A_Cchr7:480834181,0882243,200—   
chr7_48083327_A_Cchr7:480833271,056-6724,416—   
chr7_48083232_T_Gchr7:480832321,0566402,176—   
chr7_48083360_T_Cchr7:480833601,0242562,368—   
chr7_48083305_A_Cchr7:480833059921922,688—   
chr7_48083328_A_Gchr7:48083328992-5442,624—   
chr7_48083256_G_Tchr7:48083256-960-224-2,048—   
chr7_48083358_T_Gchr7:480833589284802,240—   
chr7_48083298_G_Cchr7:48083298-896-64-2,048—   
chr7_48083336_A_Cchr7:480833368643843,328—   
chr7_48083345_T_Achr7:480833458009282,368—   
chr7_48083461_G_Achr7:48083461-768-448-3,328—   
chr7_48083233_T_Gchr7:48083233-6401282,304—   
chr7_48083263_A_Gchr7:480832636081,1842,688—   
chr7_48083200_C_Gchr7:48083200-5128962,304—   
chr7_48083214_T_Achr7:480832144169922,304—   
chr7_48083251_A_Cchr7:48083251384-1282,496—   
chr7_48083419_G_Cchr7:48083419-3841602,176—   
chr7_48083248_A_Cchr7:48083248352962,560—   
chr7_48083236_C_Gchr7:480832362242563,776—   
chr7_48083234_C_Gchr7:48083234-2245442,048—   
chr7_48083291_A_Gchr7:480832911921283,456—   
chr7_48083286_T_Achr7:48083286-160-352-2,752—   
chr7_48083363_C_Tchr7:48083363-160-256-2,368—   
chr7_48083244_G_Tchr7:48083244-96128-3,136—   
chr7_48083211_C_Achr7:4808321164-768-2,176—   
chr7_48083332_C_Gchr7:48083332326402,112—   

Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.