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USP3

This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.

Scored variants near USP3

chr15:63,404,510..63,694,640, gene body plus 100 kb. Showing the strongest 200 by effect size.

Variant	Position	PXR	FXR	AhR	AF
chr15_63466875_C_T	chr15:63466875	-0.925	-0.249	-0.559	<0.001%
chr15_63466517_T_C	chr15:63466517	-0.742	-0.612	-0.774	0.0013%
chr15_63450613_C_T	chr15:63450613	0.266	0.596	1.000	0.0020%
chr15_63466516_T_C	chr15:63466516	-0.557	-0.482	-0.609	0.0013%
chr15_63466500_A_G	chr15:63466500	-0.484	-0.444	-0.579	0.0020%
chr15_63466431_A_T	chr15:63466431	0.423	0.391	0.482	0.0013%
chr15_63461439_G_A	chr15:63461439	0.401	0.094	0.582	0.0013%
chr15_63466550_C_G	chr15:63466550	0.391	0.340	0.506	<0.001%
chr15_63450354_G_C	chr15:63450354	0.347	0.409	0.653	73.2%
chr15_63466484_G_A	chr15:63466484	-0.339	-0.264	-0.450	0.023%
chr15_63449924_G_A	chr15:63449924	-0.207	-0.091	-0.556	<0.001%
chr15_63449924_G_C	chr15:63449924	-0.205	-0.090	-0.550	<0.001%
chr15_63436964_G_C	chr15:63436964	-0.161	-0.076	-0.524	<0.001%
chr15_63449990_C_T	chr15:63449990	0.255	0.180	0.524	0.0013%
chr15_63449872_T_C	chr15:63449872	0.064	-0.001	0.518	<0.001%
chr15_63461473_C_T	chr15:63461473	-0.262	-0.030	-0.462	0.0026%
chr15_63450346_T_A	chr15:63450346	0.179	0.225	0.462	<0.001%
chr15_63450642_C_A	chr15:63450642	0.091	0.209	0.453	<0.001%
chr15_63450615_C_G	chr15:63450615	0.088	0.190	0.432	<0.001%
chr15_63466880_C_T	chr15:63466880	-0.240	-0.028	-0.065	<0.001%
chr15_63437019_T_C	chr15:63437019	-0.239	-0.058	0.071	0.0013%
chr15_63466548_C_G	chr15:63466548	0.236	0.211	0.418	<0.001%
chr15_63437092_G_A	chr15:63437092	0.050	0.074	0.394	0.0020%
chr15_63450042_T_A	chr15:63450042	0.146	0.146	0.394	<0.001%
chr15_63436976_G_A	chr15:63436976	-0.136	-0.086	-0.391	0.0033%
chr15_63437031_C_T	chr15:63437031	-0.210	-0.292	-0.006	0.0020%
chr15_63466786_G_C	chr15:63466786	0.210	0.018	0.129	0.128%
chr15_63461479_G_T	chr15:63461479	-0.208	-0.036	-0.288	0.0013%
chr15_63449891_G_A	chr15:63449891	0.180	0.110	0.347	0.103%
chr15_63449992_C_G	chr15:63449992	-0.196	-0.135	-0.100	0.027%
chr15_63466557_G_T	chr15:63466557	-0.193	-0.137	-0.300	<0.001%
chr15_63461506_A_C	chr15:63461506	-0.189	-0.061	-0.274	<0.001%
chr15_63450645_C_T	chr15:63450645	0.092	0.189	0.324	<0.001%
chr15_63461472_C_T	chr15:63461472	-0.174	-0.020	-0.321	<0.001%
chr15_63466548_C_T	chr15:63466548	0.166	0.203	0.318	<0.001%
chr15_63450615_C_A	chr15:63450615	0.051	0.123	0.315	0.020%
chr15_63461483_G_C	chr15:63461483	-0.166	-0.025	-0.315	<0.001%
chr15_63450012_C_T	chr15:63450012	-0.176	-0.093	-0.282	0.066%
chr15_63466490_G_A	chr15:63466490	-0.151	-0.140	-0.300	<0.001%
chr15_63450239_A_C	chr15:63450239	0.165	0.168	0.235	<0.001%
chr15_63450366_G_T	chr15:63450366	0.160	0.183	0.226	<0.001%
chr15_63450003_C_A	chr15:63450003	-0.140	-0.085	-0.276	<0.001%
chr15_63450262_A_G	chr15:63450262	0.154	0.166	0.276	<0.001%
chr15_63450661_T_A	chr15:63450661	0.010	0.010	0.268	<0.001%
chr15_63461516_A_T	chr15:63461516	0.141	0.005	0.268	0.0013%
chr15_63466470_G_A	chr15:63466470	-0.151	-0.104	-0.229	0.0013%
chr15_63449924_G_T	chr15:63449924	-0.075	-0.022	-0.259	<0.001%
chr15_63450243_C_T	chr15:63450243	-0.145	-0.160	-0.241	<0.001%
chr15_63466428_T_C	chr15:63466428	-0.145	-0.129	-0.138	<0.001%
chr15_63437013_G_C	chr15:63437013	-0.105	-0.004	-0.241	0.0013%
chr15_63449992_C_T	chr15:63449992	-0.136	-0.091	-0.135	<0.001%
chr15_63450589_C_T	chr15:63450589	0.010	-0.005	0.241	0.0033%
chr15_63461500_C_G	chr15:63461500	-0.116	0.009	-0.238	<0.001%
chr15_63466573_G_C	chr15:63466573	-0.135	-0.206	-0.159	0.0013%
chr15_63450445_G_T	chr15:63450445	0.134	0.174	0.159	<0.001%
chr15_63466549_T_C	chr15:63466549	0.131	0.117	0.235	0.0026%
chr15_63449927_C_T	chr15:63449927	-0.121	-0.046	-0.229	0.0013%
chr15_63449941_G_T	chr15:63449941	-0.058	-0.024	-0.229	<0.001%
chr15_63466611_A_G	chr15:63466611	0.103	0.079	0.229	<0.001%
chr15_63450282_G_A	chr15:63450282	0.129	0.118	0.226	<0.001%
chr15_63449966_C_T	chr15:63449966	-0.128	-0.098	-0.129	0.0033%
chr15_63461317_C_T	chr15:63461317	0.128	0.053	0.079	0.0013%
chr15_63461530_G_A	chr15:63461530	-0.122	-0.020	-0.226	61.9%
chr15_63461399_C_G	chr15:63461399	0.079	0.024	0.224	0.022%
chr15_63461538_A_G	chr15:63461538	-0.126	-0.009	-0.209	<0.001%
chr15_63436944_G_A	chr15:63436944	0.125	-0.071	-0.082	<0.001%
chr15_63461419_C_G	chr15:63461419	-0.125	-0.018	-0.150	0.478%
chr15_63466900_C_G	chr15:63466900	0.118	0.028	0.218	0.0026%
chr15_63450448_G_A	chr15:63450448	0.122	0.187	0.203	0.0046%
chr15_63466786_G_T	chr15:63466786	0.121	0.013	-0.006	0.047%
chr15_63450132_C_G	chr15:63450132	-0.033	-0.028	0.212	71.3%
chr15_63461564_C_T	chr15:63461564	-0.082	-0.020	-0.206	0.0020%
chr15_63461425_C_T	chr15:63461425	0.116	0.014	0.109	<0.001%
chr15_63450222_T_C	chr15:63450222	0.064	0.100	0.203	<0.001%
chr15_63466504_G_A	chr15:63466504	-0.115	-0.076	-0.182	0.0013%
chr15_63461453_G_A	chr15:63461453	0.114	0.033	0.024	<0.001%
chr15_63461460_G_A	chr15:63461460	0.114	-0.003	0.153	0.0013%
chr15_63436987_G_C	chr15:63436987	-0.033	-0.129	-0.200	0.0020%
chr15_63461508_T_C	chr15:63461508	-0.113	0.000	-0.197	0.0020%
chr15_63466671_C_A	chr15:63466671	0.113	0.048	0.153	0.0033%
chr15_63437034_A_T	chr15:63437034	-0.112	-0.150	-0.024	<0.001%
chr15_63436835_A_G	chr15:63436835	0.110	0.043	0.018	0.0020%
chr15_63466428_T_A	chr15:63466428	-0.110	-0.091	-0.044	<0.001%
chr15_63437090_T_C	chr15:63437090	0.057	0.161	0.191	0.0079%
chr15_63461535_G_A	chr15:63461535	0.108	0.005	0.165	<0.001%
chr15_63436946_T_C	chr15:63436946	0.052	-0.008	0.188	<0.001%
chr15_63449941_G_A	chr15:63449941	-0.047	-0.016	-0.188	<0.001%
chr15_63450282_G_C	chr15:63450282	0.102	0.099	0.188	<0.001%
chr15_63461485_G_A	chr15:63461485	-0.106	-0.008	-0.159	0.0013%
chr15_63461395_G_C	chr15:63461395	0.090	0.003	0.185	0.269%
chr15_63461453_G_T	chr15:63461453	0.105	0.024	-0.012	0.0033%
chr15_63449933_C_G	chr15:63449933	-0.097	-0.051	-0.182	<0.001%
chr15_63450579_C_T	chr15:63450579	0.040	0.015	0.182	0.0020%
chr15_63466555_C_A	chr15:63466555	-0.103	-0.107	-0.141	0.0013%
chr15_63461420_G_A	chr15:63461420	-0.101	-0.008	-0.024	0.0013%
chr15_63466879_A_G	chr15:63466879	0.100	-0.005	0.082	<0.001%
chr15_63466482_A_C	chr15:63466482	-0.098	-0.023	-0.171	<0.001%
chr15_63461555_G_C	chr15:63461555	0.097	0.016	0.103	0.0013%
chr15_63450676_G_C	chr15:63450676	0.020	-0.001	0.171	<0.001%
chr15_63461434_C_T	chr15:63461434	-0.097	-0.018	-0.150	<0.001%
chr15_63450362_G_C	chr15:63450362	-0.096	-0.093	-0.082	0.285%
chr15_63461419_C_T	chr15:63461419	-0.095	0.003	-0.100	0.0013%
chr15_63461544_G_A	chr15:63461544	-0.065	0.001	-0.168	0.0026%
chr15_63450186_T_A	chr15:63450186	0.059	0.069	0.165	<0.001%
chr15_63466779_C_G	chr15:63466779	0.028	0.041	0.165	<0.001%
chr15_63449817_T_C	chr15:63449817	-0.024	0.000	-0.162	<0.001%
chr15_63461516_A_C	chr15:63461516	0.067	0.008	0.162	<0.001%
chr15_63437032_G_A	chr15:63437032	-0.025	-0.189	0.159	0.0053%
chr15_63437091_T_G	chr15:63437091	-0.052	-0.136	0.159	0.0079%
chr15_63449798_C_T	chr15:63449798	0.037	0.014	0.159	0.0013%
chr15_63450001_A_G	chr15:63450001	0.040	0.034	0.159	<0.001%
chr15_63450373_G_A	chr15:63450373	-0.070	-0.067	-0.159	<0.001%
chr15_63450531_C_G	chr15:63450531	0.053	0.060	0.159	<0.001%
chr15_63450552_G_A	chr15:63450552	-0.046	-0.051	-0.159	0.0026%
chr15_63461481_C_A	chr15:63461481	-0.090	-0.005	-0.088	0.0053%
chr15_63450568_A_G	chr15:63450568	-0.001	0.011	-0.156	0.0020%
chr15_63450138_C_G	chr15:63450138	-0.068	-0.074	-0.153	<0.001%
chr15_63461417_G_C	chr15:63461417	-0.086	-0.013	-0.153	<0.001%
chr15_63461389_G_C	chr15:63461389	0.086	0.009	0.124	0.054%
chr15_63461341_A_C	chr15:63461341	0.062	-0.006	0.150	0.0026%
chr15_63466807_A_T	chr15:63466807	-0.085	0.086	-0.047	<0.001%
chr15_63464859_A_G	chr15:63464859	-0.084	-0.019	0.032	0.0013%
chr15_63449909_T_C	chr15:63449909	0.060	0.049	0.147	<0.001%
chr15_63450151_C_T	chr15:63450151	-0.044	-0.037	-0.147	0.0013%
chr15_63461499_G_C	chr15:63461499	0.082	0.029	0.132	0.0013%
chr15_63449869_C_T	chr15:63449869	-0.060	-0.033	-0.144	<0.001%
chr15_63450361_G_C	chr15:63450361	-0.082	-0.060	-0.088	0.0072%
chr15_63450247_A_G	chr15:63450247	0.081	0.062	0.135	0.0013%
chr15_63450206_A_G	chr15:63450206	0.050	0.066	0.141	<0.001%
chr15_63450656_A_C	chr15:63450656	0.000	-0.003	0.141	0.0013%
chr15_63466390_G_A	chr15:63466390	-0.080	-0.043	-0.091	<0.001%
chr15_63437223_C_T	chr15:63437223	-0.026	-0.037	-0.138	0.0013%
chr15_63466858_C_T	chr15:63466858	-0.078	-0.010	-0.012	<0.001%
chr15_63437020_T_G	chr15:63437020	0.025	0.036	0.135	0.0066%
chr15_63449917_C_G	chr15:63449917	-0.077	-0.047	-0.126	<0.001%
chr15_63450563_T_C	chr15:63450563	0.015	-0.032	0.135	<0.001%
chr15_63450566_C_T	chr15:63450566	0.006	-0.023	0.135	0.0020%
chr15_63450569_C_T	chr15:63450569	0.021	-0.006	0.135	0.0013%
chr15_63466920_T_G	chr15:63466920	0.077	0.015	0.100	<0.001%
chr15_63450615_C_T	chr15:63450615	0.025	0.056	0.132	<0.001%
chr15_63449904_T_C	chr15:63449904	0.073	0.039	0.129	0.0013%
chr15_63449995_C_A	chr15:63449995	0.048	0.051	0.129	0.0033%
chr15_63461544_G_C	chr15:63461544	-0.053	-0.006	-0.129	<0.001%
chr15_63450263_T_G	chr15:63450263	0.072	0.051	0.115	<0.001%
chr15_63450605_C_G	chr15:63450605	-0.002	0.000	0.126	<0.001%
chr15_63450639_C_T	chr15:63450639	0.020	0.043	0.126	0.0026%
chr15_63461427_A_C	chr15:63461427	0.047	-0.013	0.126	<0.001%
chr15_63464847_A_C	chr15:63464847	0.007	-0.001	0.126	—
chr15_63466401_A_G	chr15:63466401	0.072	0.046	0.121	0.0013%
chr15_63466557_G_A	chr15:63466557	-0.072	-0.051	-0.124	0.0039%
chr15_63450310_A_C	chr15:63450310	-0.071	-0.102	-0.115	<0.001%
chr15_63437060_C_T	chr15:63437060	-0.033	-0.082	-0.124	<0.001%
chr15_63450509_G_T	chr15:63450509	0.067	0.058	0.124	0.0026%
chr15_63450652_G_T	chr15:63450652	-0.008	0.004	0.124	0.0013%
chr15_63466847_C_G	chr15:63466847	0.070	0.013	0.041	0.0013%
chr15_63450356_T_C	chr15:63450356	0.070	0.034	0.062	0.0040%
chr15_63450361_G_T	chr15:63450361	-0.069	-0.056	-0.097	0.0020%
chr15_63437040_C_T	chr15:63437040	0.068	-0.148	-0.068	<0.001%
chr15_63449833_A_G	chr15:63449833	0.067	0.046	0.121	<0.001%
chr15_63450636_G_T	chr15:63450636	-0.012	0.003	0.121	0.0013%
chr15_63464950_T_G	chr15:63464950	-0.002	0.008	0.121	—
chr15_63466479_A_T	chr15:63466479	-0.068	-0.030	-0.065	<0.001%
chr15_63466886_C_G	chr15:63466886	0.068	0.010	0.065	<0.001%
chr15_63450238_C_G	chr15:63450238	0.068	0.039	0.088	<0.001%
chr15_63436921_C_T	chr15:63436921	-0.067	-0.081	-0.094	0.0013%
chr15_63449888_C_A	chr15:63449888	-0.021	0.014	-0.118	0.306%
chr15_63461482_C_T	chr15:63461482	0.067	0.010	0.088	0.0066%
chr15_63450202_C_T	chr15:63450202	0.066	0.089	0.109	0.0053%
chr15_63449911_C_T	chr15:63449911	0.033	0.022	0.115	<0.001%
chr15_63450453_A_G	chr15:63450453	0.046	0.060	0.115	21.3%
chr15_63450605_C_T	chr15:63450605	-0.011	0.000	0.115	0.0013%
chr15_63461458_G_A	chr15:63461458	-0.061	-0.008	-0.115	<0.001%
chr15_63464881_G_C	chr15:63464881	-0.002	-0.004	0.115	—
chr15_63461553_T_C	chr15:63461553	0.064	0.014	0.068	0.0020%
chr15_63449967_T_C	chr15:63449967	-0.052	-0.043	-0.112	0.0020%
chr15_63450176_C_A	chr15:63450176	-0.052	-0.062	-0.112	<0.001%
chr15_63450309_G_A	chr15:63450309	-0.049	-0.056	-0.112	<0.001%
chr15_63461511_C_T	chr15:63461511	-0.058	-0.005	-0.112	0.0013%
chr15_63464906_A_T	chr15:63464906	-0.042	-0.015	0.112	—
chr15_63466425_C_T	chr15:63466425	0.063	0.063	0.065	<0.001%
chr15_63466448_C_T	chr15:63466448	0.063	0.036	0.050	20.7%
chr15_63449907_T_C	chr15:63449907	-0.058	-0.025	-0.109	0.114%
chr15_63461370_G_C	chr15:63461370	0.030	0.014	0.109	<0.001%
chr15_63461484_C_T	chr15:63461484	-0.052	0.015	-0.109	<0.001%
chr15_63464852_G_C	chr15:63464852	0.003	-0.005	0.109	—
chr15_63449997_C_A	chr15:63449997	-0.060	-0.025	-0.041	0.0013%
chr15_63450577_A_G	chr15:63450577	-0.039	-0.052	-0.106	0.0020%
chr15_63461400_C_A	chr15:63461400	0.038	0.010	0.106	0.0013%
chr15_63466686_T_C	chr15:63466686	0.027	0.008	0.106	<0.001%
chr15_63466785_G_T	chr15:63466785	0.060	0.008	-0.018	<0.001%
chr15_63466906_C_T	chr15:63466906	-0.013	-0.013	-0.106	0.0020%
chr15_63450424_G_C	chr15:63450424	0.059	0.086	0.074	0.0013%
chr15_63437006_C_T	chr15:63437006	0.003	-0.179	0.047	<0.001%
chr15_63449995_C_G	chr15:63449995	-0.058	-0.013	0.035	0.0013%
chr15_63461490_G_T	chr15:63461490	0.058	0.006	0.065	0.0020%
chr15_63466594_C_G	chr15:63466594	0.058	0.046	0.088	0.0013%
chr15_63450458_C_T	chr15:63450458	0.058	0.070	0.091	<0.001%
chr15_63461463_A_G	chr15:63461463	-0.057	-0.025	-0.088	0.0013%
chr15_63461489_G_T	chr15:63461489	-0.057	-0.001	-0.094	0.101%
chr15_63450195_G_A	chr15:63450195	-0.044	-0.039	-0.100	<0.001%

Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.