Home / Gene
USP39
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near USP39
chr2:85,502,860..85,749,284, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr2_85539660_G_C | chr2:85539660 | 0.559 | 0.189 | 0.506 | — |
| chr2_85611768_C_A | chr2:85611768 | 0.504 | 0.114 | 0.847 | — |
| chr2_85611872_C_G | chr2:85611872 | -0.155 | -0.114 | -0.835 | — |
| chr2_85611857_C_G | chr2:85611857 | -0.045 | -0.228 | -0.776 | — |
| chr2_85539711_T_C | chr2:85539711 | -0.429 | -0.039 | -0.400 | — |
| chr2_85611867_C_G | chr2:85611867 | -0.082 | -0.071 | -0.694 | — |
| chr2_85539706_A_C | chr2:85539706 | -0.373 | -0.056 | -0.153 | — |
| chr2_85611860_C_G | chr2:85611860 | -0.013 | -0.170 | -0.647 | — |
| chr2_85539681_T_C | chr2:85539681 | 0.363 | 0.074 | 0.188 | — |
| chr2_85611805_G_A | chr2:85611805 | 0.140 | 0.254 | 0.635 | — |
| chr2_85539660_G_T | chr2:85539660 | 0.346 | 0.103 | 0.318 | — |
| chr2_85539705_A_G | chr2:85539705 | -0.343 | -0.096 | -0.059 | — |
| chr2_85539694_A_T | chr2:85539694 | -0.339 | -0.103 | -0.282 | — |
| chr2_85539703_T_A | chr2:85539703 | -0.339 | -0.093 | 0.071 | — |
| chr2_85611705_G_C | chr2:85611705 | 0.093 | 0.226 | 0.600 | — |
| chr2_85611850_G_A | chr2:85611850 | 0.156 | 0.135 | 0.541 | — |
| chr2_85539703_T_G | chr2:85539703 | -0.290 | -0.062 | 0.071 | — |
| chr2_85539694_A_G | chr2:85539694 | -0.236 | -0.042 | -0.506 | — |
| chr2_85611750_C_A | chr2:85611750 | 0.281 | 0.208 | 0.506 | — |
| chr2_85539662_T_G | chr2:85539662 | -0.283 | -0.132 | -0.388 | — |
| chr2_85539784_C_G | chr2:85539784 | -0.280 | -0.152 | -0.188 | — |
| chr2_85539660_G_A | chr2:85539660 | 0.273 | 0.138 | 0.388 | — |
| chr2_85539751_G_C | chr2:85539751 | -0.210 | -0.003 | -0.482 | — |
| chr2_85539704_T_G | chr2:85539704 | -0.256 | -0.071 | -0.012 | — |
| chr2_85539688_G_A | chr2:85539688 | 0.253 | 0.077 | 0.153 | — |
| chr2_85539784_C_A | chr2:85539784 | -0.250 | -0.114 | -0.176 | — |
| chr2_85539706_A_T | chr2:85539706 | -0.246 | -0.082 | -0.118 | — |
| chr2_85611843_A_G | chr2:85611843 | 0.030 | -0.114 | -0.435 | — |
| chr2_85611871_G_C | chr2:85611871 | -0.103 | -0.046 | -0.435 | — |
| chr2_85539707_C_G | chr2:85539707 | -0.243 | -0.053 | 0.035 | — |
| chr2_85539664_T_C | chr2:85539664 | 0.233 | 0.102 | 0.165 | — |
| chr2_85539711_T_A | chr2:85539711 | -0.233 | -0.028 | 0.118 | — |
| chr2_85539740_G_T | chr2:85539740 | 0.233 | 0.091 | 0.176 | — |
| chr2_85611862_C_G | chr2:85611862 | -0.068 | -0.099 | -0.412 | — |
| chr2_85539743_G_C | chr2:85539743 | 0.230 | 0.095 | 0.141 | — |
| chr2_85539703_T_C | chr2:85539703 | -0.226 | -0.039 | 0.106 | — |
| chr2_85539705_A_C | chr2:85539705 | -0.226 | -0.036 | 0.047 | — |
| chr2_85539784_C_T | chr2:85539784 | -0.223 | -0.066 | -0.059 | — |
| chr2_85539661_C_G | chr2:85539661 | 0.220 | 0.037 | -0.165 | — |
| chr2_85539691_G_T | chr2:85539691 | -0.216 | -0.048 | -0.141 | — |
| chr2_85539694_A_C | chr2:85539694 | 0.216 | 0.006 | 0.059 | — |
| chr2_85539761_C_G | chr2:85539761 | -0.213 | -0.063 | -0.153 | — |
| chr2_85539792_G_C | chr2:85539792 | -0.163 | -0.096 | -0.376 | — |
| chr2_85611858_G_T | chr2:85611858 | 0.077 | 0.137 | 0.376 | — |
| chr2_85539782_C_A | chr2:85539782 | -0.206 | -0.086 | -0.071 | — |
| chr2_85539789_C_A | chr2:85539789 | 0.173 | 0.122 | 0.365 | — |
| chr2_85611875_T_G | chr2:85611875 | -0.002 | -0.129 | -0.365 | — |
| chr2_85539707_C_A | chr2:85539707 | -0.203 | -0.024 | -0.082 | — |
| chr2_85539707_C_T | chr2:85539707 | -0.203 | -0.055 | -0.024 | — |
| chr2_85539797_G_C | chr2:85539797 | 0.203 | -0.086 | -0.224 | — |
| chr2_85611850_G_C | chr2:85611850 | 0.203 | 0.028 | 0.200 | — |
| chr2_85539712_C_T | chr2:85539712 | 0.200 | 0.088 | 0.012 | — |
| chr2_85539693_G_T | chr2:85539693 | -0.196 | 0.023 | -0.071 | — |
| chr2_85539666_G_C | chr2:85539666 | 0.193 | 0.112 | 0.153 | — |
| chr2_85539668_C_T | chr2:85539668 | 0.193 | 0.102 | 0.000 | — |
| chr2_85539782_C_T | chr2:85539782 | -0.193 | -0.069 | 0.000 | — |
| chr2_85611871_G_T | chr2:85611871 | -0.090 | -0.053 | -0.341 | — |
| chr2_85539676_A_G | chr2:85539676 | -0.190 | -0.034 | -0.059 | — |
| chr2_85539764_G_C | chr2:85539764 | -0.190 | -0.067 | -0.059 | — |
| chr2_85539777_G_T | chr2:85539777 | -0.190 | -0.063 | -0.059 | — |
| chr2_85539684_C_G | chr2:85539684 | 0.000 | -0.067 | -0.329 | — |
| chr2_85539704_T_C | chr2:85539704 | -0.186 | -0.038 | 0.082 | — |
| chr2_85539789_C_G | chr2:85539789 | 0.186 | 0.076 | 0.188 | — |
| chr2_85611718_G_A | chr2:85611718 | 0.040 | 0.069 | 0.329 | — |
| chr2_85611863_A_C | chr2:85611863 | -0.082 | -0.046 | -0.329 | — |
| chr2_85539667_T_C | chr2:85539667 | 0.183 | 0.066 | 0.176 | — |
| chr2_85539708_C_A | chr2:85539708 | -0.183 | -0.015 | -0.059 | — |
| chr2_85539747_A_C | chr2:85539747 | 0.183 | 0.046 | 0.118 | — |
| chr2_85539664_T_A | chr2:85539664 | 0.180 | 0.114 | 0.224 | — |
| chr2_85539762_T_G | chr2:85539762 | 0.180 | 0.043 | -0.153 | — |
| chr2_85611741_C_G | chr2:85611741 | 0.180 | 0.063 | 0.294 | — |
| chr2_85611845_T_G | chr2:85611845 | 0.027 | -0.091 | -0.318 | — |
| chr2_85611851_C_G | chr2:85611851 | 0.110 | -0.094 | -0.318 | — |
| chr2_85611853_G_C | chr2:85611853 | 0.180 | 0.041 | 0.282 | — |
| chr2_85611858_G_C | chr2:85611858 | 0.175 | 0.071 | 0.318 | — |
| chr2_85539691_G_A | chr2:85539691 | -0.176 | -0.034 | -0.082 | — |
| chr2_85539705_A_T | chr2:85539705 | -0.176 | -0.022 | 0.035 | — |
| chr2_85539765_C_G | chr2:85539765 | -0.176 | -0.076 | -0.106 | — |
| chr2_85539766_G_C | chr2:85539766 | -0.173 | -0.038 | -0.024 | — |
| chr2_85611763_T_G | chr2:85611763 | -0.030 | 0.058 | 0.306 | — |
| chr2_85611863_A_G | chr2:85611863 | -0.073 | -0.056 | -0.306 | — |
| chr2_85611868_G_C | chr2:85611868 | -0.101 | -0.066 | -0.306 | — |
| chr2_85611852_G_C | chr2:85611852 | 0.171 | 0.061 | 0.282 | — |
| chr2_85611852_G_T | chr2:85611852 | 0.171 | 0.056 | 0.282 | — |
| chr2_85539714_C_T | chr2:85539714 | -0.170 | -0.010 | 0.012 | — |
| chr2_85539786_C_G | chr2:85539786 | -0.170 | -0.096 | 0.024 | — |
| chr2_85611849_G_T | chr2:85611849 | 0.170 | 0.063 | 0.282 | — |
| chr2_85539664_T_G | chr2:85539664 | -0.166 | -0.066 | -0.271 | — |
| chr2_85539740_G_A | chr2:85539740 | 0.166 | 0.032 | 0.200 | — |
| chr2_85611850_G_T | chr2:85611850 | 0.156 | 0.063 | 0.294 | — |
| chr2_85611854_C_G | chr2:85611854 | 0.145 | -0.096 | -0.294 | — |
| chr2_85611869_G_C | chr2:85611869 | -0.085 | -0.043 | -0.294 | — |
| chr2_85611880_A_G | chr2:85611880 | -0.060 | -0.053 | -0.294 | — |
| chr2_85611881_G_T | chr2:85611881 | 0.165 | 0.076 | 0.165 | — |
| chr2_85539691_G_C | chr2:85539691 | -0.163 | -0.019 | -0.059 | — |
| chr2_85539699_A_C | chr2:85539699 | 0.163 | 0.003 | -0.024 | — |
| chr2_85539783_G_T | chr2:85539783 | -0.163 | -0.114 | -0.082 | — |
| chr2_85539792_G_T | chr2:85539792 | -0.163 | -0.084 | -0.259 | — |
| chr2_85539666_G_T | chr2:85539666 | 0.160 | 0.145 | 0.094 | — |
| chr2_85539692_G_A | chr2:85539692 | -0.160 | -0.027 | -0.153 | — |
| chr2_85539743_G_A | chr2:85539743 | 0.160 | 0.044 | 0.024 | — |
| chr2_85539756_G_C | chr2:85539756 | -0.143 | -0.060 | -0.282 | — |
| chr2_85539776_C_G | chr2:85539776 | -0.160 | -0.069 | -0.059 | — |
| chr2_85539779_G_A | chr2:85539779 | -0.160 | -0.033 | 0.000 | — |
| chr2_85539783_G_C | chr2:85539783 | -0.160 | -0.152 | -0.071 | — |
| chr2_85539791_C_G | chr2:85539791 | 0.160 | 0.038 | 0.118 | — |
| chr2_85611856_G_T | chr2:85611856 | 0.048 | 0.066 | 0.282 | — |
| chr2_85539777_G_A | chr2:85539777 | -0.156 | -0.043 | -0.035 | — |
| chr2_85539781_G_C | chr2:85539781 | -0.156 | -0.091 | 0.024 | — |
| chr2_85539739_A_G | chr2:85539739 | -0.153 | -0.056 | -0.212 | — |
| chr2_85539761_C_T | chr2:85539761 | -0.153 | -0.025 | -0.059 | — |
| chr2_85539764_G_T | chr2:85539764 | -0.153 | -0.046 | -0.047 | — |
| chr2_85611713_G_A | chr2:85611713 | -0.032 | 0.074 | 0.271 | — |
| chr2_85611759_C_A | chr2:85611759 | 0.097 | -0.028 | 0.271 | — |
| chr2_85611765_C_G | chr2:85611765 | 0.108 | 0.124 | 0.271 | — |
| chr2_85611844_G_T | chr2:85611844 | 0.013 | 0.096 | 0.271 | — |
| chr2_85611856_G_C | chr2:85611856 | 0.135 | 0.079 | 0.271 | — |
| chr2_85611874_G_A | chr2:85611874 | 0.062 | 0.066 | 0.271 | — |
| chr2_85611874_G_T | chr2:85611874 | 0.030 | 0.071 | 0.271 | — |
| chr2_85539743_G_T | chr2:85539743 | 0.150 | 0.060 | 0.118 | — |
| chr2_85539760_G_T | chr2:85539760 | -0.150 | -0.048 | -0.071 | — |
| chr2_85539776_C_T | chr2:85539776 | -0.150 | -0.041 | -0.012 | — |
| chr2_85539790_C_G | chr2:85539790 | 0.150 | 0.061 | 0.235 | — |
| chr2_85611855_G_C | chr2:85611855 | 0.148 | 0.053 | 0.200 | — |
| chr2_85539785_G_C | chr2:85539785 | 0.000 | -0.046 | 0.259 | — |
| chr2_85539790_C_A | chr2:85539790 | 0.090 | 0.071 | 0.259 | — |
| chr2_85611804_G_T | chr2:85611804 | 0.077 | 0.124 | 0.259 | — |
| chr2_85611853_G_A | chr2:85611853 | 0.085 | 0.063 | 0.259 | — |
| chr2_85611858_G_A | chr2:85611858 | 0.058 | 0.046 | 0.259 | — |
| chr2_85539786_C_A | chr2:85539786 | -0.143 | -0.069 | -0.035 | — |
| chr2_85611859_G_C | chr2:85611859 | 0.143 | 0.043 | 0.165 | — |
| chr2_85611824_C_G | chr2:85611824 | 0.141 | 0.025 | 0.094 | — |
| chr2_85539669_G_A | chr2:85539669 | 0.063 | 0.056 | 0.247 | — |
| chr2_85539690_A_G | chr2:85539690 | -0.007 | -0.048 | -0.247 | — |
| chr2_85539695_G_T | chr2:85539695 | -0.140 | -0.016 | -0.071 | — |
| chr2_85539742_G_T | chr2:85539742 | 0.140 | 0.069 | 0.153 | — |
| chr2_85539782_C_G | chr2:85539782 | -0.140 | -0.096 | 0.247 | — |
| chr2_85539787_G_C | chr2:85539787 | -0.100 | -0.070 | -0.247 | — |
| chr2_85539789_C_T | chr2:85539789 | 0.100 | 0.066 | 0.247 | — |
| chr2_85611724_G_T | chr2:85611724 | 0.042 | 0.074 | 0.247 | — |
| chr2_85611825_G_T | chr2:85611825 | -0.030 | 0.048 | 0.247 | — |
| chr2_85611826_G_T | chr2:85611826 | 0.005 | 0.076 | 0.247 | — |
| chr2_85611845_T_C | chr2:85611845 | -0.043 | -0.056 | -0.247 | — |
| chr2_85611849_G_A | chr2:85611849 | 0.110 | 0.074 | 0.247 | — |
| chr2_85611853_G_T | chr2:85611853 | 0.092 | 0.066 | 0.247 | — |
| chr2_85611854_C_A | chr2:85611854 | 0.138 | 0.051 | 0.247 | — |
| chr2_85539675_G_C | chr2:85539675 | 0.136 | 0.014 | 0.082 | — |
| chr2_85539689_A_C | chr2:85539689 | -0.136 | -0.027 | 0.024 | — |
| chr2_85539719_C_A | chr2:85539719 | -0.136 | 0.019 | 0.200 | — |
| chr2_85539740_G_C | chr2:85539740 | 0.136 | 0.034 | 0.188 | — |
| chr2_85539722_C_A | chr2:85539722 | 0.093 | 0.079 | 0.235 | — |
| chr2_85539765_C_A | chr2:85539765 | -0.133 | -0.052 | -0.071 | — |
| chr2_85539775_T_C | chr2:85539775 | -0.116 | -0.072 | -0.235 | — |
| chr2_85539776_C_A | chr2:85539776 | -0.133 | -0.036 | 0.024 | — |
| chr2_85611775_T_G | chr2:85611775 | 0.100 | 0.079 | 0.235 | — |
| chr2_85611810_A_C | chr2:85611810 | 0.042 | -0.033 | -0.235 | — |
| chr2_85611843_A_T | chr2:85611843 | 0.133 | 0.043 | 0.024 | — |
| chr2_85611852_G_A | chr2:85611852 | 0.088 | 0.061 | 0.235 | — |
| chr2_85611873_G_C | chr2:85611873 | 0.070 | 0.069 | 0.235 | — |
| chr2_85539681_T_A | chr2:85539681 | 0.130 | 0.028 | 0.082 | — |
| chr2_85539763_C_A | chr2:85539763 | -0.130 | -0.047 | 0.047 | — |
| chr2_85539662_T_C | chr2:85539662 | -0.126 | -0.042 | 0.047 | — |
| chr2_85539742_G_C | chr2:85539742 | 0.126 | 0.032 | 0.071 | — |
| chr2_85539767_T_C | chr2:85539767 | 0.040 | -0.025 | -0.224 | — |
| chr2_85539771_G_A | chr2:85539771 | -0.126 | -0.041 | -0.106 | — |
| chr2_85539777_G_C | chr2:85539777 | -0.126 | -0.053 | -0.071 | — |
| chr2_85611716_T_G | chr2:85611716 | 0.013 | -0.056 | -0.224 | — |
| chr2_85611744_C_G | chr2:85611744 | 0.080 | 0.010 | 0.224 | — |
| chr2_85611867_C_T | chr2:85611867 | -0.023 | -0.066 | -0.224 | — |
| chr2_85539665_G_T | chr2:85539665 | 0.123 | 0.094 | 0.059 | — |
| chr2_85539668_C_A | chr2:85539668 | 0.123 | 0.102 | 0.024 | — |
| chr2_85539713_C_T | chr2:85539713 | -0.123 | -0.010 | 0.024 | — |
| chr2_85539668_C_G | chr2:85539668 | 0.120 | 0.104 | 0.094 | — |
| chr2_85539690_A_C | chr2:85539690 | -0.120 | -0.030 | -0.129 | — |
| chr2_85539719_C_G | chr2:85539719 | -0.120 | 0.005 | 0.082 | — |
| chr2_85539735_C_A | chr2:85539735 | 0.077 | 0.037 | 0.212 | — |
| chr2_85539779_G_T | chr2:85539779 | -0.120 | -0.037 | 0.024 | — |
| chr2_85539791_C_A | chr2:85539791 | 0.100 | 0.051 | 0.212 | — |
| chr2_85611718_G_T | chr2:85611718 | 0.038 | 0.081 | 0.212 | — |
| chr2_85611721_G_A | chr2:85611721 | 0.033 | 0.008 | 0.212 | — |
| chr2_85611732_C_A | chr2:85611732 | -0.003 | 0.038 | 0.212 | — |
| chr2_85611748_T_C | chr2:85611748 | 0.095 | 0.025 | 0.212 | — |
| chr2_85611773_T_G | chr2:85611773 | 0.120 | 0.046 | 0.047 | — |
| chr2_85611810_A_G | chr2:85611810 | 0.037 | -0.041 | -0.212 | — |
| chr2_85611847_G_A | chr2:85611847 | 0.047 | 0.010 | 0.212 | — |
| chr2_85539706_A_G | chr2:85539706 | -0.116 | -0.029 | 0.047 | — |
| chr2_85539754_C_G | chr2:85539754 | 0.116 | 0.041 | 0.071 | — |
| chr2_85539760_G_C | chr2:85539760 | -0.116 | -0.071 | -0.082 | — |
| chr2_85539791_C_T | chr2:85539791 | 0.116 | 0.061 | 0.165 | — |
| chr2_85611742_A_C | chr2:85611742 | 0.116 | 0.000 | 0.094 | — |
| chr2_85611855_G_T | chr2:85611855 | 0.116 | 0.041 | 0.153 | — |
| chr2_85539673_G_A | chr2:85539673 | 0.113 | -0.008 | -0.059 | — |
| chr2_85539689_A_T | chr2:85539689 | -0.113 | -0.009 | -0.035 | — |
| chr2_85539721_G_C | chr2:85539721 | -0.077 | -0.072 | -0.200 | — |
| chr2_85539745_C_A | chr2:85539745 | 0.113 | 0.048 | 0.059 | — |
| chr2_85539745_C_T | chr2:85539745 | 0.113 | 0.056 | 0.082 | — |
| chr2_85539747_A_T | chr2:85539747 | 0.113 | 0.042 | 0.059 | — |
| chr2_85539751_G_T | chr2:85539751 | -0.113 | 0.009 | -0.106 | — |
| chr2_85539767_T_G | chr2:85539767 | -0.067 | -0.067 | -0.200 | — |
| chr2_85539778_G_T | chr2:85539778 | -0.020 | 0.036 | 0.200 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.