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VAT1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near VAT1
chr17:42,914,606..43,122,385, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_43021953_C_A | chr17:43021953 | 0.293 | 0.206 | 1.000 | — |
| chr17_43021919_C_T | chr17:43021919 | 0.206 | 0.190 | 1.000 | — |
| chr17_43022175_A_G | chr17:43022175 | 0.609 | -0.044 | 0.224 | — |
| chr17_43022107_C_A | chr17:43022107 | 0.579 | 0.065 | 0.635 | — |
| chr17_43021933_C_G | chr17:43021933 | 0.160 | 0.166 | 0.800 | — |
| chr17_43022220_A_C | chr17:43022220 | -0.067 | -0.115 | -0.741 | — |
| chr17_43022166_G_C | chr17:43022166 | 0.349 | 0.063 | 0.294 | — |
| chr17_43022104_G_C | chr17:43022104 | 0.346 | 0.006 | 0.024 | — |
| chr17_43022103_G_C | chr17:43022103 | 0.336 | 0.024 | 0.094 | — |
| chr17_43021939_G_C | chr17:43021939 | 0.085 | 0.103 | 0.588 | — |
| chr17_43022092_G_A | chr17:43022092 | 0.053 | 0.096 | 0.553 | — |
| chr17_43021935_C_G | chr17:43021935 | -0.078 | -0.043 | 0.529 | — |
| chr17_43021936_C_G | chr17:43021936 | -0.013 | -0.018 | 0.529 | — |
| chr17_43022184_G_A | chr17:43022184 | 0.123 | 0.148 | 0.529 | — |
| chr17_43021934_A_G | chr17:43021934 | -0.105 | -0.049 | 0.518 | — |
| chr17_43022200_G_C | chr17:43022200 | 0.293 | -0.011 | 0.200 | — |
| chr17_43022201_G_C | chr17:43022201 | 0.283 | -0.010 | 0.224 | — |
| chr17_43021934_A_T | chr17:43021934 | -0.115 | -0.039 | 0.494 | — |
| chr17_43022207_G_A | chr17:43022207 | 0.173 | 0.056 | 0.494 | — |
| chr17_43022189_G_C | chr17:43022189 | 0.276 | 0.004 | 0.235 | — |
| chr17_43021931_C_G | chr17:43021931 | 0.025 | 0.066 | 0.482 | — |
| chr17_43021969_C_T | chr17:43021969 | 0.075 | 0.105 | 0.482 | — |
| chr17_43022137_C_G | chr17:43022137 | 0.166 | 0.140 | 0.482 | — |
| chr17_43022205_C_A | chr17:43022205 | 0.140 | 0.039 | 0.482 | — |
| chr17_43022203_G_C | chr17:43022203 | 0.266 | -0.009 | 0.235 | — |
| chr17_43021934_A_C | chr17:43021934 | -0.161 | -0.053 | 0.459 | — |
| chr17_43021935_C_T | chr17:43021935 | -0.082 | -0.048 | 0.459 | — |
| chr17_43021936_C_A | chr17:43021936 | -0.052 | -0.029 | 0.459 | — |
| chr17_43022199_C_A | chr17:43022199 | 0.183 | 0.025 | 0.459 | — |
| chr17_43022205_C_T | chr17:43022205 | 0.153 | 0.051 | 0.459 | — |
| chr17_43022207_G_T | chr17:43022207 | 0.183 | 0.055 | 0.459 | — |
| chr17_43022203_G_A | chr17:43022203 | 0.256 | 0.030 | 0.424 | — |
| chr17_43022180_A_C | chr17:43022180 | -0.007 | -0.060 | -0.447 | — |
| chr17_43022228_G_T | chr17:43022228 | 0.053 | 0.077 | 0.447 | — |
| chr17_43021906_G_T | chr17:43021906 | -0.017 | -0.053 | -0.441 | — |
| chr17_43022204_G_A | chr17:43022204 | 0.200 | 0.047 | 0.435 | — |
| chr17_43022197_G_C | chr17:43022197 | 0.243 | -0.022 | 0.224 | — |
| chr17_43022200_G_T | chr17:43022200 | 0.243 | 0.011 | 0.318 | — |
| chr17_43022203_G_T | chr17:43022203 | 0.243 | 0.033 | 0.412 | — |
| chr17_43022202_C_T | chr17:43022202 | 0.206 | 0.033 | 0.424 | <0.001% |
| chr17_43022200_G_A | chr17:43022200 | 0.236 | 0.014 | 0.376 | — |
| chr17_43022198_G_C | chr17:43022198 | 0.233 | 0.011 | 0.224 | — |
| chr17_43022210_G_A | chr17:43022210 | 0.080 | 0.066 | 0.412 | — |
| chr17_43022193_A_C | chr17:43022193 | -0.053 | -0.051 | -0.400 | — |
| chr17_43022215_T_G | chr17:43022215 | -0.103 | -0.042 | -0.400 | — |
| chr17_43022106_C_G | chr17:43022106 | 0.057 | 0.033 | 0.388 | — |
| chr17_43022199_C_T | chr17:43022199 | 0.163 | 0.043 | 0.388 | — |
| chr17_43022202_C_A | chr17:43022202 | 0.220 | 0.022 | 0.376 | <0.001% |
| chr17_43022211_C_A | chr17:43022211 | 0.073 | 0.048 | 0.388 | — |
| chr17_43021935_C_A | chr17:43021935 | -0.126 | -0.028 | 0.376 | — |
| chr17_43021936_C_T | chr17:43021936 | -0.043 | -0.028 | 0.376 | — |
| chr17_43022180_A_G | chr17:43022180 | -0.063 | -0.055 | -0.376 | — |
| chr17_43022185_T_C | chr17:43022185 | -0.023 | -0.055 | -0.376 | — |
| chr17_43022195_G_C | chr17:43022195 | 0.213 | -0.004 | 0.082 | — |
| chr17_43022197_G_T | chr17:43022197 | 0.213 | 0.006 | 0.318 | — |
| chr17_43022201_G_T | chr17:43022201 | 0.213 | 0.020 | 0.376 | — |
| chr17_43022204_G_T | chr17:43022204 | 0.156 | 0.038 | 0.376 | — |
| chr17_43022208_C_A | chr17:43022208 | 0.087 | 0.049 | 0.376 | — |
| chr17_43022208_C_T | chr17:43022208 | 0.080 | 0.041 | 0.376 | 0.035% |
| chr17_43022210_G_C | chr17:43022210 | 0.213 | 0.003 | 0.224 | — |
| chr17_43022225_G_A | chr17:43022225 | 0.020 | 0.082 | 0.376 | — |
| chr17_43022046_G_C | chr17:43022046 | 0.113 | 0.051 | 0.365 | — |
| chr17_43022115_C_G | chr17:43022115 | 0.047 | 0.053 | 0.365 | — |
| chr17_43022195_G_T | chr17:43022195 | 0.200 | 0.044 | 0.365 | — |
| chr17_43022198_G_A | chr17:43022198 | 0.103 | 0.032 | 0.365 | — |
| chr17_43022206_G_A | chr17:43022206 | 0.140 | 0.046 | 0.365 | — |
| chr17_43022206_G_T | chr17:43022206 | 0.176 | 0.038 | 0.365 | — |
| chr17_43022209_G_T | chr17:43022209 | 0.116 | 0.066 | 0.365 | — |
| chr17_43022210_G_T | chr17:43022210 | 0.110 | 0.053 | 0.365 | — |
| chr17_43022216_T_G | chr17:43022216 | 0.027 | -0.065 | -0.365 | — |
| chr17_43022219_G_T | chr17:43022219 | 0.067 | 0.063 | 0.365 | — |
| chr17_43022111_G_C | chr17:43022111 | 0.203 | 0.013 | 0.094 | — |
| chr17_43022050_T_A | chr17:43022050 | 0.060 | 0.091 | 0.353 | — |
| chr17_43022087_A_G | chr17:43022087 | -0.040 | -0.030 | -0.353 | — |
| chr17_43022110_G_C | chr17:43022110 | 0.200 | 0.019 | 0.035 | — |
| chr17_43022196_C_T | chr17:43022196 | 0.057 | 0.036 | 0.353 | — |
| chr17_43022105_G_C | chr17:43022105 | 0.196 | 0.038 | 0.188 | — |
| chr17_43022204_G_C | chr17:43022204 | 0.196 | 0.006 | 0.247 | — |
| chr17_43022117_G_T | chr17:43022117 | 0.037 | 0.107 | 0.341 | — |
| chr17_43022191_C_T | chr17:43022191 | 0.033 | 0.058 | 0.341 | 1.04% |
| chr17_43022198_G_T | chr17:43022198 | 0.146 | 0.036 | 0.341 | — |
| chr17_43022215_T_C | chr17:43022215 | -0.057 | -0.055 | -0.341 | — |
| chr17_43022201_G_A | chr17:43022201 | 0.190 | 0.033 | 0.329 | — |
| chr17_43021926_A_T | chr17:43021926 | -0.012 | -0.060 | -0.329 | — |
| chr17_43022101_A_G | chr17:43022101 | -0.040 | -0.033 | -0.329 | — |
| chr17_43022174_C_G | chr17:43022174 | 0.186 | 0.005 | 0.035 | <0.001% |
| chr17_43022183_A_G | chr17:43022183 | -0.020 | -0.047 | -0.329 | — |
| chr17_43022189_G_T | chr17:43022189 | 0.070 | 0.037 | 0.329 | — |
| chr17_43022190_G_T | chr17:43022190 | -0.017 | 0.039 | 0.329 | — |
| chr17_43022196_C_A | chr17:43022196 | 0.087 | 0.020 | 0.329 | — |
| chr17_43022219_G_A | chr17:43022219 | -0.007 | 0.074 | 0.329 | <0.001% |
| chr17_43022220_A_G | chr17:43022220 | -0.033 | -0.051 | -0.329 | — |
| chr17_43022225_G_T | chr17:43022225 | 0.017 | 0.067 | 0.329 | — |
| chr17_43022229_G_T | chr17:43022229 | 0.053 | 0.113 | 0.329 | — |
| chr17_43022110_G_A | chr17:43022110 | 0.183 | 0.058 | 0.294 | — |
| chr17_43021923_G_C | chr17:43021923 | -0.018 | -0.084 | -0.318 | — |
| chr17_43021931_C_T | chr17:43021931 | -0.018 | 0.027 | 0.318 | — |
| chr17_43022108_G_A | chr17:43022108 | 0.037 | 0.034 | 0.318 | 0.0020% |
| chr17_43022191_C_A | chr17:43022191 | 0.007 | 0.041 | 0.318 | — |
| chr17_43022197_G_A | chr17:43022197 | 0.156 | 0.024 | 0.318 | 0.0013% |
| chr17_43022205_C_G | chr17:43022205 | 0.043 | 0.011 | 0.318 | — |
| chr17_43022209_G_A | chr17:43022209 | 0.093 | 0.052 | 0.318 | — |
| chr17_43022110_G_T | chr17:43022110 | 0.176 | 0.046 | 0.235 | — |
| chr17_43022165_A_G | chr17:43022165 | -0.176 | -0.044 | -0.165 | — |
| chr17_43022101_A_C | chr17:43022101 | -0.010 | -0.025 | -0.306 | — |
| chr17_43022165_A_C | chr17:43022165 | -0.103 | -0.069 | -0.306 | — |
| chr17_43022109_G_C | chr17:43022109 | 0.170 | 0.019 | 0.082 | — |
| chr17_43021926_A_C | chr17:43021926 | -0.063 | -0.044 | -0.294 | 0.0013% |
| chr17_43022062_C_G | chr17:43022062 | 0.040 | 0.029 | 0.294 | — |
| chr17_43022085_T_G | chr17:43022085 | -0.010 | -0.043 | -0.294 | — |
| chr17_43022090_T_C | chr17:43022090 | 0.003 | -0.028 | -0.294 | — |
| chr17_43022109_G_A | chr17:43022109 | 0.140 | 0.049 | 0.294 | 0.0013% |
| chr17_43022163_T_C | chr17:43022163 | 0.003 | -0.030 | -0.294 | — |
| chr17_43022187_G_T | chr17:43022187 | 0.073 | 0.041 | 0.294 | — |
| chr17_43022195_G_A | chr17:43022195 | 0.110 | 0.042 | 0.294 | — |
| chr17_43022226_C_T | chr17:43022226 | -0.007 | 0.046 | 0.294 | — |
| chr17_43021933_C_A | chr17:43021933 | 0.012 | -0.004 | 0.282 | — |
| chr17_43022096_G_T | chr17:43022096 | -0.010 | 0.046 | 0.282 | — |
| chr17_43022106_C_A | chr17:43022106 | 0.083 | 0.032 | 0.282 | — |
| chr17_43022152_T_C | chr17:43022152 | -0.160 | -0.033 | -0.082 | — |
| chr17_43022171_A_C | chr17:43022171 | -0.030 | -0.024 | -0.282 | — |
| chr17_43022170_T_G | chr17:43022170 | -0.156 | -0.039 | -0.094 | — |
| chr17_43021911_G_C | chr17:43021911 | -0.051 | -0.015 | -0.271 | — |
| chr17_43022103_G_T | chr17:43022103 | 0.077 | 0.051 | 0.271 | — |
| chr17_43022111_G_T | chr17:43022111 | 0.153 | 0.038 | 0.200 | — |
| chr17_43022145_C_G | chr17:43022145 | 0.153 | 0.020 | -0.012 | — |
| chr17_43022183_A_C | chr17:43022183 | 0.040 | -0.053 | -0.271 | — |
| chr17_43022187_G_A | chr17:43022187 | 0.020 | 0.014 | 0.271 | — |
| chr17_43022213_C_G | chr17:43022213 | -0.060 | -0.020 | -0.271 | — |
| chr17_43022216_T_C | chr17:43022216 | -0.013 | -0.044 | -0.271 | — |
| chr17_43022230_A_C | chr17:43022230 | 0.010 | -0.016 | -0.271 | — |
| chr17_43022167_C_T | chr17:43022167 | 0.150 | 0.032 | 0.071 | — |
| chr17_43021932_T_C | chr17:43021932 | -0.047 | -0.055 | 0.259 | — |
| chr17_43022053_G_C | chr17:43022053 | 0.073 | 0.018 | 0.259 | — |
| chr17_43022100_C_T | chr17:43022100 | 0.030 | 0.037 | 0.259 | — |
| chr17_43022111_G_A | chr17:43022111 | 0.146 | 0.043 | 0.247 | — |
| chr17_43022193_A_G | chr17:43022193 | -0.070 | -0.071 | -0.259 | — |
| chr17_43022211_C_T | chr17:43022211 | 0.040 | 0.039 | 0.259 | — |
| chr17_43022229_G_C | chr17:43022229 | 0.010 | 0.085 | 0.259 | — |
| chr17_43022206_G_C | chr17:43022206 | 0.143 | 0.001 | 0.188 | — |
| chr17_43022207_G_C | chr17:43022207 | 0.143 | 0.004 | 0.165 | — |
| chr17_43021900_T_C | chr17:43021900 | 0.016 | -0.036 | -0.247 | — |
| chr17_43021920_T_C | chr17:43021920 | -0.037 | -0.044 | -0.247 | — |
| chr17_43021937_T_A | chr17:43021937 | -0.002 | -0.009 | 0.247 | <0.001% |
| chr17_43021979_G_A | chr17:43021979 | 0.063 | -0.024 | 0.247 | — |
| chr17_43021990_G_C | chr17:43021990 | -0.040 | -0.051 | -0.247 | — |
| chr17_43022048_T_C | chr17:43022048 | 0.073 | 0.015 | 0.247 | — |
| chr17_43022115_C_T | chr17:43022115 | -0.057 | 0.000 | 0.247 | — |
| chr17_43022163_T_G | chr17:43022163 | -0.106 | -0.036 | -0.247 | — |
| chr17_43022188_C_A | chr17:43022188 | -0.010 | 0.006 | 0.247 | — |
| chr17_43022189_G_A | chr17:43022189 | 0.077 | 0.044 | 0.247 | — |
| chr17_43022223_C_A | chr17:43022223 | -0.020 | 0.056 | 0.247 | — |
| chr17_43022212_C_G | chr17:43022212 | -0.136 | -0.011 | -0.188 | — |
| chr17_43021985_T_C | chr17:43021985 | -0.135 | -0.032 | -0.200 | — |
| chr17_43021906_G_C | chr17:43021906 | -0.051 | -0.020 | -0.235 | — |
| chr17_43021937_T_C | chr17:43021937 | 0.020 | -0.020 | 0.235 | — |
| chr17_43022029_C_G | chr17:43022029 | 0.103 | 0.036 | 0.235 | — |
| chr17_43022085_T_C | chr17:43022085 | -0.033 | -0.022 | -0.235 | — |
| chr17_43022112_G_A | chr17:43022112 | 0.116 | 0.061 | 0.235 | — |
| chr17_43022199_C_G | chr17:43022199 | 0.106 | -0.029 | 0.235 | — |
| chr17_43022229_G_A | chr17:43022229 | 0.000 | 0.081 | 0.235 | — |
| chr17_43022230_A_G | chr17:43022230 | 0.007 | 0.000 | -0.235 | — |
| chr17_43022103_G_A | chr17:43022103 | 0.130 | 0.048 | 0.224 | — |
| chr17_43022187_G_C | chr17:43022187 | 0.130 | -0.003 | 0.012 | — |
| chr17_43022202_C_G | chr17:43022202 | 0.130 | -0.028 | 0.224 | — |
| chr17_43021921_A_C | chr17:43021921 | -0.023 | -0.055 | -0.224 | — |
| chr17_43021938_T_A | chr17:43021938 | -0.058 | -0.022 | 0.224 | — |
| chr17_43021999_G_T | chr17:43021999 | -0.008 | 0.039 | -0.224 | — |
| chr17_43022005_C_A | chr17:43022005 | -0.023 | 0.090 | 0.224 | — |
| chr17_43022075_A_T | chr17:43022075 | 0.007 | 0.034 | 0.224 | — |
| chr17_43022095_G_A | chr17:43022095 | 0.027 | 0.032 | 0.224 | <0.001% |
| chr17_43022095_G_T | chr17:43022095 | 0.017 | 0.027 | 0.224 | — |
| chr17_43022134_C_T | chr17:43022134 | 0.040 | 0.060 | 0.224 | — |
| chr17_43022149_G_A | chr17:43022149 | 0.050 | 0.085 | 0.224 | — |
| chr17_43022179_C_T | chr17:43022179 | 0.013 | 0.030 | 0.224 | — |
| chr17_43022190_G_A | chr17:43022190 | 0.027 | 0.036 | 0.224 | — |
| chr17_43022217_C_A | chr17:43022217 | 0.013 | 0.016 | 0.224 | 0.0046% |
| chr17_43022223_C_T | chr17:43022223 | 0.023 | 0.069 | 0.224 | — |
| chr17_43021930_G_C | chr17:43021930 | -0.123 | -0.044 | -0.212 | — |
| chr17_43021898_C_T | chr17:43021898 | -0.043 | -0.019 | -0.212 | — |
| chr17_43021931_C_A | chr17:43021931 | -0.040 | 0.025 | 0.212 | — |
| chr17_43021940_C_A | chr17:43021940 | 0.018 | 0.057 | 0.212 | — |
| chr17_43021953_C_G | chr17:43021953 | 0.095 | 0.041 | 0.212 | — |
| chr17_43021969_C_G | chr17:43021969 | 0.080 | -0.013 | 0.212 | — |
| chr17_43022066_C_T | chr17:43022066 | 0.013 | 0.034 | 0.212 | — |
| chr17_43022089_C_G | chr17:43022089 | -0.120 | 0.022 | 0.024 | — |
| chr17_43022105_G_A | chr17:43022105 | 0.087 | 0.034 | 0.212 | — |
| chr17_43022109_G_T | chr17:43022109 | 0.037 | 0.029 | 0.212 | — |
| chr17_43022114_G_C | chr17:43022114 | 0.023 | 0.019 | 0.212 | — |
| chr17_43022124_G_T | chr17:43022124 | 0.013 | 0.011 | 0.212 | — |
| chr17_43022135_T_A | chr17:43022135 | -0.037 | -0.056 | -0.212 | — |
| chr17_43022222_G_A | chr17:43022222 | 0.010 | 0.057 | 0.212 | — |
| chr17_43022227_G_T | chr17:43022227 | 0.063 | 0.061 | 0.212 | — |
| chr17_43021982_C_G | chr17:43021982 | 0.116 | 0.029 | 0.059 | — |
| chr17_43022031_C_G | chr17:43022031 | 0.116 | 0.005 | -0.059 | — |
| chr17_43022113_C_G | chr17:43022113 | -0.116 | 0.025 | -0.059 | — |
| chr17_43022012_G_C | chr17:43022012 | 0.115 | 0.029 | 0.094 | — |
| chr17_43021923_G_T | chr17:43021923 | -0.005 | -0.043 | -0.200 | — |
| chr17_43021932_T_A | chr17:43021932 | -0.052 | -0.041 | 0.200 | — |
| chr17_43022054_A_C | chr17:43022054 | 0.113 | 0.022 | 0.118 | — |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.