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XAF1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near XAF1
chr17:6,655,446..6,875,645, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_6683366_A_G | chr17:6683366 | -0.912 | -1.000 | -0.912 | 0.0020% |
| chr17_6657305_T_C | chr17:6657305 | 0.037 | 0.282 | 1.000 | <0.001% |
| chr17_6683280_T_G | chr17:6683280 | -0.667 | -0.744 | -0.453 | 0.0013% |
| chr17_6677254_T_G | chr17:6677254 | -0.602 | -0.504 | -0.929 | 0.0013% |
| chr17_6700126_A_T | chr17:6700126 | 0.547 | 0.563 | 0.188 | — |
| chr17_6657049_C_G | chr17:6657049 | 0.154 | 0.129 | 0.960 | <0.001% |
| chr17_6666196_C_T | chr17:6666196 | -0.541 | -0.008 | -0.035 | <0.001% |
| chr17_6677259_C_A | chr17:6677259 | -0.526 | -0.449 | -0.618 | 0.805% |
| chr17_6677307_G_A | chr17:6677307 | -0.502 | -0.398 | -0.676 | 0.016% |
| chr17_6700098_C_G | chr17:6700098 | 0.484 | 0.038 | 0.153 | <0.001% |
| chr17_6677241_G_A | chr17:6677241 | 0.466 | 0.319 | 0.406 | 0.804% |
| chr17_6677195_G_T | chr17:6677195 | -0.458 | -0.444 | -0.547 | 0.0013% |
| chr17_6683303_C_A | chr17:6683303 | -0.454 | -0.419 | -0.400 | 0.0020% |
| chr17_6657247_C_G | chr17:6657247 | 0.074 | 0.291 | 0.779 | 0.061% |
| chr17_6683382_G_C | chr17:6683382 | -0.436 | -0.434 | -0.406 | <0.001% |
| chr17_6700114_A_G | chr17:6700114 | 0.436 | 0.391 | 0.335 | — |
| chr17_6666232_G_C | chr17:6666232 | 0.429 | 0.142 | 0.171 | <0.001% |
| chr17_6683344_A_G | chr17:6683344 | -0.416 | -0.419 | -0.382 | 0.0020% |
| chr17_6677349_G_T | chr17:6677349 | 0.411 | 0.343 | 0.412 | 0.807% |
| chr17_6683390_C_T | chr17:6683390 | -0.404 | -0.419 | -0.388 | 0.0020% |
| chr17_6657202_T_A | chr17:6657202 | 0.124 | 0.131 | 0.709 | <0.001% |
| chr17_6657213_G_T | chr17:6657213 | 0.168 | 0.119 | 0.709 | <0.001% |
| chr17_6666223_A_C | chr17:6666223 | -0.394 | -0.135 | -0.106 | 0.0020% |
| chr17_6683344_A_C | chr17:6683344 | -0.388 | -0.510 | -0.312 | <0.001% |
| chr17_6677265_C_T | chr17:6677265 | -0.378 | -0.301 | -0.476 | 0.0072% |
| chr17_6677274_T_C | chr17:6677274 | -0.371 | -0.344 | -0.424 | 0.244% |
| chr17_6666221_G_T | chr17:6666221 | -0.370 | -0.119 | -0.194 | 0.0013% |
| chr17_6700115_A_C | chr17:6700115 | 0.358 | 0.254 | 0.459 | — |
| chr17_6677201_C_T | chr17:6677201 | -0.351 | -0.289 | -0.424 | 0.810% |
| chr17_6700115_A_T | chr17:6700115 | 0.349 | 0.259 | 0.012 | — |
| chr17_6677248_A_T | chr17:6677248 | 0.344 | 0.272 | 0.400 | 0.0013% |
| chr17_6666457_C_T | chr17:6666457 | -0.342 | -0.289 | -0.435 | 0.0026% |
| chr17_6666457_C_A | chr17:6666457 | -0.324 | -0.279 | -0.382 | <0.001% |
| chr17_6677293_C_G | chr17:6677293 | 0.306 | 0.264 | 0.329 | <0.001% |
| chr17_6700123_C_A | chr17:6700123 | -0.306 | -0.294 | -0.171 | — |
| chr17_6677198_G_A | chr17:6677198 | -0.301 | -0.275 | -0.418 | 0.101% |
| chr17_6677185_G_A | chr17:6677185 | -0.295 | -0.198 | -0.394 | 0.0013% |
| chr17_6677215_A_T | chr17:6677215 | -0.290 | -0.216 | -0.294 | 0.0090% |
| chr17_6666474_C_T | chr17:6666474 | 0.287 | 0.223 | 0.312 | <0.001% |
| chr17_6677757_G_A | chr17:6677757 | 0.270 | 0.317 | 0.335 | <0.001% |
| chr17_6666204_G_T | chr17:6666204 | -0.266 | 0.000 | -0.041 | <0.001% |
| chr17_6657207_C_G | chr17:6657207 | 0.109 | 0.082 | 0.456 | <0.001% |
| chr17_6677349_G_A | chr17:6677349 | 0.255 | 0.227 | 0.282 | 0.0020% |
| chr17_6683894_T_C | chr17:6683894 | -0.057 | -0.129 | -0.447 | <0.001% |
| chr17_6657302_A_C | chr17:6657302 | -0.031 | 0.023 | 0.444 | <0.001% |
| chr17_6666227_C_G | chr17:6666227 | 0.250 | 0.008 | 0.071 | 0.0013% |
| chr17_6666227_C_T | chr17:6666227 | 0.242 | 0.122 | 0.065 | <0.001% |
| chr17_6666229_G_A | chr17:6666229 | -0.241 | -0.096 | -0.112 | 0.0053% |
| chr17_6700050_C_A | chr17:6700050 | 0.241 | 0.282 | 0.047 | <0.001% |
| chr17_6676965_C_T | chr17:6676965 | 0.240 | 0.145 | 0.124 | <0.001% |
| chr17_6656974_G_T | chr17:6656974 | 0.073 | 0.018 | 0.422 | <0.001% |
| chr17_6666453_T_C | chr17:6666453 | -0.238 | -0.162 | -0.194 | <0.001% |
| chr17_6677142_G_T | chr17:6677142 | -0.235 | -0.185 | -0.318 | 0.0013% |
| chr17_6700061_G_A | chr17:6700061 | 0.213 | 0.203 | 0.047 | 10.4% |
| chr17_6666130_C_A | chr17:6666130 | 0.211 | -0.010 | 0.035 | <0.001% |
| chr17_6700113_T_G | chr17:6700113 | 0.211 | 0.218 | 0.200 | <0.001% |
| chr17_6657246_C_T | chr17:6657246 | 0.080 | 0.220 | 0.371 | 0.0020% |
| chr17_6657153_C_T | chr17:6657153 | 0.123 | 0.143 | 0.365 | <0.001% |
| chr17_6657369_A_T | chr17:6657369 | -0.116 | -0.188 | -0.365 | <0.001% |
| chr17_6700117_T_C | chr17:6700117 | 0.205 | 0.208 | 0.124 | — |
| chr17_6700122_G_T | chr17:6700122 | -0.205 | -0.178 | -0.176 | 0.0013% |
| chr17_6666197_A_G | chr17:6666197 | -0.198 | -0.028 | 0.012 | <0.001% |
| chr17_6700115_A_G | chr17:6700115 | 0.193 | 0.127 | 0.171 | — |
| chr17_6677049_G_C | chr17:6677049 | 0.190 | 0.132 | 0.224 | 0.0033% |
| chr17_6666131_C_G | chr17:6666131 | 0.189 | -0.048 | 0.000 | <0.001% |
| chr17_6677299_C_T | chr17:6677299 | -0.186 | -0.151 | -0.212 | 0.0020% |
| chr17_6666443_T_C | chr17:6666443 | -0.184 | -0.086 | -0.159 | <0.001% |
| chr17_6657445_C_G | chr17:6657445 | -0.023 | -0.095 | -0.324 | 54.2% |
| chr17_6666456_A_T | chr17:6666456 | -0.182 | -0.137 | -0.288 | <0.001% |
| chr17_6666138_A_T | chr17:6666138 | 0.181 | 0.036 | 0.041 | 0.0053% |
| chr17_6666234_G_A | chr17:6666234 | 0.179 | 0.038 | 0.076 | <0.001% |
| chr17_6657281_G_A | chr17:6657281 | 0.028 | -0.292 | 0.312 | <0.001% |
| chr17_6677577_T_C | chr17:6677577 | -0.023 | -0.005 | 0.312 | 0.041% |
| chr17_6677348_A_T | chr17:6677348 | 0.175 | 0.133 | 0.176 | 0.0013% |
| chr17_6683382_G_A | chr17:6683382 | -0.175 | -0.213 | -0.194 | <0.001% |
| chr17_6700125_G_A | chr17:6700125 | -0.175 | -0.117 | -0.147 | — |
| chr17_6666128_C_T | chr17:6666128 | 0.174 | 0.000 | -0.006 | <0.001% |
| chr17_6677258_C_T | chr17:6677258 | -0.168 | -0.140 | -0.129 | <0.001% |
| chr17_6683385_T_C | chr17:6683385 | 0.168 | 0.251 | 0.194 | <0.001% |
| chr17_6700122_G_C | chr17:6700122 | -0.165 | -0.178 | -0.082 | — |
| chr17_6657280_C_T | chr17:6657280 | -0.030 | -0.246 | 0.288 | <0.001% |
| chr17_6677651_C_A | chr17:6677651 | 0.077 | 0.056 | 0.288 | <0.001% |
| chr17_6683430_A_G | chr17:6683430 | 0.163 | 0.041 | 0.041 | <0.001% |
| chr17_6700070_T_G | chr17:6700070 | -0.163 | -0.203 | 0.029 | <0.001% |
| chr17_6666335_G_A | chr17:6666335 | -0.162 | -0.048 | -0.159 | <0.001% |
| chr17_6683287_C_T | chr17:6683287 | -0.161 | -0.173 | -0.165 | 0.0033% |
| chr17_6656872_C_A | chr17:6656872 | 0.029 | 0.059 | 0.284 | 0.0020% |
| chr17_6677315_C_T | chr17:6677315 | -0.160 | -0.152 | -0.282 | <0.001% |
| chr17_6700024_G_C | chr17:6700024 | 0.097 | 0.487 | 0.100 | <0.001% |
| chr17_6700127_G_A | chr17:6700127 | -0.158 | -0.132 | -0.129 | — |
| chr17_6657216_G_A | chr17:6657216 | 0.150 | 0.170 | 0.276 | <0.001% |
| chr17_6683367_T_C | chr17:6683367 | -0.156 | -0.135 | -0.129 | 0.073% |
| chr17_6666202_C_T | chr17:6666202 | -0.155 | -0.030 | -0.035 | <0.001% |
| chr17_6677325_A_G | chr17:6677325 | 0.155 | 0.132 | 0.171 | 0.0033% |
| chr17_6700124_T_C | chr17:6700124 | 0.151 | 0.213 | 0.171 | <0.001% |
| chr17_6656855_G_C | chr17:6656855 | 0.031 | 0.086 | 0.263 | 0.0020% |
| chr17_6656969_A_C | chr17:6656969 | 0.052 | 0.032 | 0.263 | <0.001% |
| chr17_6700114_A_T | chr17:6700114 | 0.148 | 0.173 | 0.094 | — |
| chr17_6677355_C_T | chr17:6677355 | -0.146 | -0.107 | -0.224 | 0.013% |
| chr17_6677072_G_T | chr17:6677072 | -0.138 | -0.098 | -0.253 | <0.001% |
| chr17_6677621_G_T | chr17:6677621 | -0.005 | -0.016 | 0.253 | <0.001% |
| chr17_6683312_G_A | chr17:6683312 | -0.143 | -0.058 | -0.129 | 0.0026% |
| chr17_6684183_G_C | chr17:6684183 | 0.141 | 0.294 | 0.253 | 0.0046% |
| chr17_6700116_C_T | chr17:6700116 | -0.143 | -0.135 | -0.100 | — |
| chr17_6666377_T_A | chr17:6666377 | 0.142 | 0.094 | 0.182 | 0.0013% |
| chr17_6677194_G_C | chr17:6677194 | -0.140 | -0.208 | -0.135 | 0.0020% |
| chr17_6657145_G_A | chr17:6657145 | 0.081 | 0.054 | 0.246 | <0.001% |
| chr17_6700126_A_C | chr17:6700126 | 0.138 | 0.198 | 0.165 | — |
| chr17_6657443_T_G | chr17:6657443 | -0.033 | -0.072 | -0.241 | <0.001% |
| chr17_6677356_G_A | chr17:6677356 | -0.136 | -0.061 | -0.153 | 0.0020% |
| chr17_6677637_T_C | chr17:6677637 | 0.012 | -0.001 | 0.241 | <0.001% |
| chr17_6683274_G_A | chr17:6683274 | -0.135 | -0.152 | -0.112 | 0.0020% |
| chr17_6666132_C_G | chr17:6666132 | 0.134 | -0.066 | 0.012 | 0.0013% |
| chr17_6677286_C_T | chr17:6677286 | -0.133 | -0.123 | -0.212 | <0.001% |
| chr17_6683372_T_C | chr17:6683372 | -0.131 | -0.261 | -0.071 | 0.0013% |
| chr17_6656850_G_C | chr17:6656850 | 0.024 | 0.070 | 0.231 | 0.0046% |
| chr17_6666385_C_T | chr17:6666385 | -0.131 | -0.096 | -0.159 | <0.001% |
| chr17_6657219_A_G | chr17:6657219 | 0.053 | 0.053 | 0.229 | <0.001% |
| chr17_6666312_C_T | chr17:6666312 | -0.130 | -0.061 | -0.124 | 0.0013% |
| chr17_6669225_T_G | chr17:6669225 | -0.018 | -0.022 | 0.229 | <0.001% |
| chr17_6683435_G_A | chr17:6683435 | -0.130 | -0.127 | -0.124 | 39.6% |
| chr17_6657374_G_A | chr17:6657374 | 0.021 | 0.010 | 0.224 | 54.1% |
| chr17_6683351_T_C | chr17:6683351 | 0.023 | -0.015 | -0.224 | 0.0013% |
| chr17_6700124_T_A | chr17:6700124 | 0.126 | 0.239 | 0.088 | — |
| chr17_6683315_G_A | chr17:6683315 | -0.125 | -0.104 | -0.141 | 0.0020% |
| chr17_6700041_C_T | chr17:6700041 | -0.125 | -0.066 | -0.082 | <0.001% |
| chr17_6700120_G_A | chr17:6700120 | -0.125 | -0.096 | -0.118 | — |
| chr17_6700121_A_T | chr17:6700121 | 0.125 | 0.066 | 0.106 | — |
| chr17_6657276_C_T | chr17:6657276 | 0.067 | 0.072 | 0.218 | 54.1% |
| chr17_6683267_T_A | chr17:6683267 | -0.123 | -0.183 | -0.082 | <0.001% |
| chr17_6657196_C_A | chr17:6657196 | -0.020 | -0.014 | 0.215 | <0.001% |
| chr17_6700102_G_A | chr17:6700102 | -0.121 | -0.081 | -0.094 | <0.001% |
| chr17_6700123_C_T | chr17:6700123 | -0.121 | -0.066 | -0.141 | — |
| chr17_6656974_G_C | chr17:6656974 | 0.031 | 0.034 | 0.213 | <0.001% |
| chr17_6657316_G_A | chr17:6657316 | -0.038 | 0.044 | 0.212 | 0.0013% |
| chr17_6677595_C_T | chr17:6677595 | 0.120 | 0.037 | 0.124 | 0.0072% |
| chr17_6700121_A_C | chr17:6700121 | 0.120 | 0.152 | 0.118 | — |
| chr17_6700126_A_G | chr17:6700126 | 0.120 | 0.025 | 0.106 | — |
| chr17_6657172_C_G | chr17:6657172 | 0.039 | 0.037 | 0.209 | 0.0013% |
| chr17_6666175_C_T | chr17:6666175 | -0.118 | 0.028 | -0.012 | 0.0013% |
| chr17_6677228_A_G | chr17:6677228 | 0.118 | 0.140 | 0.182 | 0.165% |
| chr17_6677294_C_T | chr17:6677294 | 0.118 | 0.103 | 0.112 | <0.001% |
| chr17_6677319_G_T | chr17:6677319 | -0.118 | -0.080 | -0.141 | 0.0039% |
| chr17_6657457_G_T | chr17:6657457 | 0.022 | 0.010 | 0.206 | <0.001% |
| chr17_6666211_A_G | chr17:6666211 | 0.116 | 0.028 | 0.082 | 15.3% |
| chr17_6657273_G_C | chr17:6657273 | 0.060 | -0.093 | 0.200 | <0.001% |
| chr17_6666249_C_A | chr17:6666249 | -0.113 | -0.063 | -0.159 | <0.001% |
| chr17_6676489_C_A | chr17:6676489 | 0.030 | 0.019 | 0.200 | 0.0013% |
| chr17_6683231_G_T | chr17:6683231 | -0.075 | -0.345 | -0.100 | <0.001% |
| chr17_6700117_T_A | chr17:6700117 | 0.113 | 0.086 | 0.047 | — |
| chr17_6656851_G_A | chr17:6656851 | 0.021 | 0.062 | 0.199 | 0.0026% |
| chr17_6657011_G_A | chr17:6657011 | 0.024 | 0.030 | 0.199 | <0.001% |
| chr17_6677184_T_C | chr17:6677184 | 0.110 | 0.070 | 0.112 | 2.92% |
| chr17_6677491_G_C | chr17:6677491 | -0.110 | -0.093 | -0.094 | <0.001% |
| chr17_6683231_G_A | chr17:6683231 | -0.080 | -0.335 | -0.100 | <0.001% |
| chr17_6700118_C_G | chr17:6700118 | 0.110 | 0.127 | 0.035 | — |
| chr17_6657170_C_G | chr17:6657170 | 0.034 | 0.029 | 0.191 | <0.001% |
| chr17_6677597_A_G | chr17:6677597 | 0.108 | 0.013 | 0.188 | <0.001% |
| chr17_6657228_G_T | chr17:6657228 | 0.084 | -0.009 | 0.188 | <0.001% |
| chr17_6677243_C_T | chr17:6677243 | 0.106 | 0.230 | 0.065 | 0.0039% |
| chr17_6677167_A_G | chr17:6677167 | 0.105 | 0.065 | 0.165 | 0.0013% |
| chr17_6683879_C_T | chr17:6683879 | 0.050 | 0.079 | 0.182 | <0.001% |
| chr17_6657132_T_C | chr17:6657132 | 0.047 | 0.056 | 0.179 | <0.001% |
| chr17_6666233_A_G | chr17:6666233 | 0.101 | 0.150 | 0.124 | <0.001% |
| chr17_6666102_G_A | chr17:6666102 | -0.100 | 0.000 | -0.112 | 0.0092% |
| chr17_6666417_C_T | chr17:6666417 | -0.100 | -0.069 | -0.118 | <0.001% |
| chr17_6677670_C_T | chr17:6677670 | 0.040 | 0.029 | 0.176 | <0.001% |
| chr17_6700120_G_C | chr17:6700120 | 0.100 | 0.051 | 0.018 | — |
| chr17_6700122_G_A | chr17:6700122 | -0.100 | -0.122 | -0.059 | — |
| chr17_6666309_A_G | chr17:6666309 | 0.099 | -0.010 | 0.047 | <0.001% |
| chr17_6666395_C_A | chr17:6666395 | 0.098 | 0.058 | 0.024 | <0.001% |
| chr17_6657372_T_G | chr17:6657372 | -0.068 | -0.072 | -0.171 | 54.2% |
| chr17_6666152_T_A | chr17:6666152 | -0.097 | -0.038 | -0.088 | <0.001% |
| chr17_6677404_G_T | chr17:6677404 | 0.060 | 0.067 | 0.171 | <0.001% |
| chr17_6677558_G_T | chr17:6677558 | -0.097 | -0.010 | -0.141 | 0.0020% |
| chr17_6684189_A_G | chr17:6684189 | -0.032 | -0.084 | -0.171 | <0.001% |
| chr17_6700119_A_C | chr17:6700119 | -0.097 | -0.086 | 0.012 | — |
| chr17_6666248_G_A | chr17:6666248 | -0.096 | -0.020 | -0.065 | 0.914% |
| chr17_6669262_T_A | chr17:6669262 | 0.058 | -0.025 | 0.165 | <0.001% |
| chr17_6700025_C_A | chr17:6700025 | -0.093 | -0.096 | -0.065 | <0.001% |
| chr17_6656857_G_A | chr17:6656857 | 0.016 | 0.048 | 0.162 | 0.0013% |
| chr17_6683195_G_T | chr17:6683195 | -0.092 | -0.084 | -0.106 | <0.001% |
| chr17_6700125_G_T | chr17:6700125 | -0.092 | -0.066 | -0.047 | — |
| chr17_6657232_G_A | chr17:6657232 | 0.059 | 0.114 | 0.159 | 0.0020% |
| chr17_6676512_C_T | chr17:6676512 | 0.010 | -0.022 | 0.159 | <0.001% |
| chr17_6677158_C_T | chr17:6677158 | -0.090 | -0.060 | -0.124 | 0.155% |
| chr17_6677600_G_T | chr17:6677600 | -0.090 | -0.013 | 0.029 | 0.0026% |
| chr17_6666250_G_T | chr17:6666250 | 0.089 | 0.036 | 0.024 | 0.0013% |
| chr17_6657225_C_G | chr17:6657225 | 0.052 | 0.124 | 0.156 | <0.001% |
| chr17_6700113_T_A | chr17:6700113 | 0.088 | 0.056 | 0.065 | — |
| chr17_6656859_G_A | chr17:6656859 | 0.013 | 0.050 | 0.154 | <0.001% |
| chr17_6666210_C_A | chr17:6666210 | 0.087 | 0.005 | -0.035 | 0.0026% |
| chr17_6700052_A_G | chr17:6700052 | -0.087 | -0.102 | -0.035 | 0.0013% |
| chr17_6666200_C_G | chr17:6666200 | 0.030 | 0.135 | 0.153 | 0.0020% |
| chr17_6666337_A_G | chr17:6666337 | 0.087 | 0.033 | 0.118 | 0.127% |
| chr17_6666520_G_A | chr17:6666520 | -0.082 | -0.061 | -0.153 | <0.001% |
| chr17_6676515_C_G | chr17:6676515 | 0.035 | -0.024 | 0.153 | <0.001% |
| chr17_6676973_G_A | chr17:6676973 | -0.075 | -0.061 | -0.153 | 0.0085% |
| chr17_6677342_C_T | chr17:6677342 | -0.087 | -0.080 | -0.118 | <0.001% |
| chr17_6683476_C_T | chr17:6683476 | -0.087 | -0.124 | -0.106 | 0.062% |
Showing 200 of 200 in this window. Scores are the p99-scaled [−1, 1] value; click a column to sort.