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XAF1
This gene is outside the curated CAMIP panel, so it has no curated annotation. Its scored variants from the atlas are listed below.
Scored variants near XAF1
chr17:6,655,446..6,875,645, gene body plus 100 kb. Showing the strongest 200 by effect size.
| Variant | Position | PXR ▾ | FXR | AhR | AF |
|---|---|---|---|---|---|
| chr17_6683366_A_G | chr17:6683366 | -35,072 | -12,736 | -19,840 | 2.0e-5 |
| chr17_6683280_T_G | chr17:6683280 | -25,664 | -9,376 | -9,856 | 1.3e-5 |
| chr17_6677254_T_G | chr17:6677254 | -23,168 | -6,352 | -20,224 | 1.3e-5 |
| chr17_6700126_A_T | chr17:6700126 | 21,056 | 7,104 | 4,096 | — |
| chr17_6666196_C_T | chr17:6666196 | -20,800 | -96 | -768 | 6.6e-6 |
| chr17_6677259_C_A | chr17:6677259 | -20,224 | -5,664 | -13,440 | 8.1e-3 |
| chr17_6677307_G_A | chr17:6677307 | -19,328 | -5,024 | -14,720 | 1.6e-4 |
| chr17_6700098_C_G | chr17:6700098 | 18,624 | 480 | 3,328 | 6.6e-6 |
| chr17_6677241_G_A | chr17:6677241 | 17,920 | 4,016 | 8,832 | 8.0e-3 |
| chr17_6677195_G_T | chr17:6677195 | -17,600 | -5,600 | -11,904 | 1.3e-5 |
| chr17_6683303_C_A | chr17:6683303 | -17,472 | -5,280 | -8,704 | 2.0e-5 |
| chr17_6683382_G_C | chr17:6683382 | -16,768 | -5,472 | -8,832 | 6.6e-6 |
| chr17_6700114_A_G | chr17:6700114 | 16,768 | 4,928 | 7,296 | — |
| chr17_6666232_G_C | chr17:6666232 | 16,512 | 1,792 | 3,712 | 6.6e-6 |
| chr17_6683344_A_G | chr17:6683344 | -16,000 | -5,280 | -8,320 | 2.0e-5 |
| chr17_6677349_G_T | chr17:6677349 | 15,808 | 4,320 | 8,960 | 8.1e-3 |
| chr17_6683390_C_T | chr17:6683390 | -15,552 | -5,280 | -8,448 | 2.0e-5 |
| chr17_6666223_A_C | chr17:6666223 | -15,136 | -1,696 | -2,304 | 2.0e-5 |
| chr17_6683344_A_C | chr17:6683344 | -14,912 | -6,432 | -6,784 | 6.6e-6 |
| chr17_6677265_C_T | chr17:6677265 | -14,528 | -3,792 | -10,368 | 7.2e-5 |
| chr17_6677274_T_C | chr17:6677274 | -14,272 | -4,336 | -9,216 | 2.4e-3 |
| chr17_6666221_G_T | chr17:6666221 | -14,240 | -1,504 | -4,224 | 1.3e-5 |
| chr17_6700115_A_C | chr17:6700115 | 13,760 | 3,200 | 9,984 | — |
| chr17_6677201_C_T | chr17:6677201 | -13,504 | -3,648 | -9,216 | 8.1e-3 |
| chr17_6700115_A_T | chr17:6700115 | 13,440 | 3,264 | 256 | — |
| chr17_6677248_A_T | chr17:6677248 | 13,248 | 3,424 | 8,704 | 1.3e-5 |
| chr17_6666457_C_T | chr17:6666457 | -13,152 | -3,648 | -9,472 | 2.6e-5 |
| chr17_6666457_C_A | chr17:6666457 | -12,480 | -3,520 | -8,320 | 6.6e-6 |
| chr17_6677293_C_G | chr17:6677293 | 11,776 | 3,328 | 7,168 | 6.6e-6 |
| chr17_6700123_C_A | chr17:6700123 | -11,776 | -3,712 | -3,712 | — |
| chr17_6677198_G_A | chr17:6677198 | -11,584 | -3,472 | -9,088 | 1.0e-3 |
| chr17_6677185_G_A | chr17:6677185 | -11,328 | -2,496 | -8,576 | 1.3e-5 |
| chr17_6677215_A_T | chr17:6677215 | -11,136 | -2,720 | -6,400 | 9.0e-5 |
| chr17_6666474_C_T | chr17:6666474 | 11,040 | 2,816 | 6,784 | 6.6e-6 |
| chr17_6677757_G_A | chr17:6677757 | 10,368 | 4,000 | 7,296 | 6.6e-6 |
| chr17_6666204_G_T | chr17:6666204 | -10,240 | 0 | -896 | 6.6e-6 |
| chr17_6677349_G_A | chr17:6677349 | 9,792 | 2,864 | 6,144 | 2.0e-5 |
| chr17_6666227_C_G | chr17:6666227 | 9,600 | 96 | 1,536 | 1.3e-5 |
| chr17_6666227_C_T | chr17:6666227 | 9,312 | 1,536 | 1,408 | 6.6e-6 |
| chr17_6666229_G_A | chr17:6666229 | -9,280 | -1,216 | -2,432 | 5.3e-5 |
| chr17_6700050_C_A | chr17:6700050 | 9,280 | 3,552 | 1,024 | 6.6e-6 |
| chr17_6676965_C_T | chr17:6676965 | 9,216 | 1,824 | 2,688 | 6.6e-6 |
| chr17_6666453_T_C | chr17:6666453 | -9,152 | -2,048 | -4,224 | 6.6e-6 |
| chr17_6677142_G_T | chr17:6677142 | -9,024 | -2,336 | -6,912 | 1.3e-5 |
| chr17_6700061_G_A | chr17:6700061 | 8,192 | 2,560 | 1,024 | 1.0e-1 |
| chr17_6666130_C_A | chr17:6666130 | 8,128 | -128 | 768 | 6.6e-6 |
| chr17_6700113_T_G | chr17:6700113 | 8,128 | 2,752 | 4,352 | 6.6e-6 |
| chr17_6700117_T_C | chr17:6700117 | 7,872 | 2,624 | 2,688 | — |
| chr17_6700122_G_T | chr17:6700122 | -7,872 | -2,240 | -3,840 | 1.3e-5 |
| chr17_6666197_A_G | chr17:6666197 | -7,616 | -352 | 256 | 6.6e-6 |
| chr17_6700115_A_G | chr17:6700115 | 7,424 | 1,600 | 3,712 | — |
| chr17_6677049_G_C | chr17:6677049 | 7,296 | 1,664 | 4,864 | 3.3e-5 |
| chr17_6666131_C_G | chr17:6666131 | 7,264 | -608 | 0 | 6.6e-6 |
| chr17_6677299_C_T | chr17:6677299 | -7,168 | -1,904 | -4,608 | 2.0e-5 |
| chr17_6666443_T_C | chr17:6666443 | -7,072 | -1,088 | -3,456 | 6.6e-6 |
| chr17_6666456_A_T | chr17:6666456 | -7,008 | -1,728 | -6,272 | 6.6e-6 |
| chr17_6666138_A_T | chr17:6666138 | 6,944 | 448 | 896 | 5.3e-5 |
| chr17_6666234_G_A | chr17:6666234 | 6,880 | 480 | 1,664 | 6.6e-6 |
| chr17_6677348_A_T | chr17:6677348 | 6,720 | 1,680 | 3,840 | 1.3e-5 |
| chr17_6683382_G_A | chr17:6683382 | -6,720 | -2,688 | -4,224 | 6.6e-6 |
| chr17_6700125_G_A | chr17:6700125 | -6,720 | -1,472 | -3,200 | — |
| chr17_6666128_C_T | chr17:6666128 | 6,688 | 0 | -128 | 6.6e-6 |
| chr17_6657213_G_T | chr17:6657213 | 6,480 | 1,504 | 15,424 | 6.6e-6 |
| chr17_6677258_C_T | chr17:6677258 | -6,464 | -1,760 | -2,816 | 6.6e-6 |
| chr17_6683385_T_C | chr17:6683385 | 6,464 | 3,168 | 4,224 | 6.6e-6 |
| chr17_6700122_G_C | chr17:6700122 | -6,336 | -2,240 | -1,792 | — |
| chr17_6683430_A_G | chr17:6683430 | 6,272 | 512 | 896 | 6.6e-6 |
| chr17_6700070_T_G | chr17:6700070 | -6,272 | -2,560 | 640 | 6.6e-6 |
| chr17_6666335_G_A | chr17:6666335 | -6,240 | -608 | -3,456 | 6.6e-6 |
| chr17_6683287_C_T | chr17:6683287 | -6,208 | -2,176 | -3,584 | 3.3e-5 |
| chr17_6677315_C_T | chr17:6677315 | -6,144 | -1,920 | -6,144 | 6.6e-6 |
| chr17_6700127_G_A | chr17:6700127 | -6,080 | -1,664 | -2,816 | — |
| chr17_6683367_T_C | chr17:6683367 | -6,016 | -1,696 | -2,816 | 7.3e-4 |
| chr17_6666202_C_T | chr17:6666202 | -5,952 | -384 | -768 | 6.6e-6 |
| chr17_6677325_A_G | chr17:6677325 | 5,952 | 1,664 | 3,712 | 3.3e-5 |
| chr17_6657049_C_G | chr17:6657049 | 5,920 | 1,632 | 20,896 | 6.6e-6 |
| chr17_6700124_T_C | chr17:6700124 | 5,824 | 2,688 | 3,712 | 6.6e-6 |
| chr17_6657216_G_A | chr17:6657216 | 5,776 | 2,144 | 6,016 | 6.6e-6 |
| chr17_6700114_A_T | chr17:6700114 | 5,696 | 2,176 | 2,048 | — |
| chr17_6677355_C_T | chr17:6677355 | -5,632 | -1,344 | -4,864 | 1.3e-4 |
| chr17_6683312_G_A | chr17:6683312 | -5,504 | -736 | -2,816 | 2.6e-5 |
| chr17_6700116_C_T | chr17:6700116 | -5,504 | -1,696 | -2,176 | — |
| chr17_6666377_T_A | chr17:6666377 | 5,472 | 1,184 | 3,968 | 1.3e-5 |
| chr17_6684183_G_C | chr17:6684183 | 5,440 | 3,712 | 5,504 | 4.6e-5 |
| chr17_6677194_G_C | chr17:6677194 | -5,376 | -2,624 | -2,944 | 2.0e-5 |
| chr17_6677072_G_T | chr17:6677072 | -5,312 | -1,232 | -5,504 | 6.6e-6 |
| chr17_6700126_A_C | chr17:6700126 | 5,312 | 2,496 | 3,584 | — |
| chr17_6677356_G_A | chr17:6677356 | -5,248 | -768 | -3,328 | 2.0e-5 |
| chr17_6683274_G_A | chr17:6683274 | -5,184 | -1,920 | -2,432 | 2.0e-5 |
| chr17_6666132_C_G | chr17:6666132 | 5,152 | -832 | 256 | 1.3e-5 |
| chr17_6677286_C_T | chr17:6677286 | -5,120 | -1,552 | -4,608 | 6.6e-6 |
| chr17_6683372_T_C | chr17:6683372 | -5,056 | -3,296 | -1,536 | 1.3e-5 |
| chr17_6666385_C_T | chr17:6666385 | -5,024 | -1,216 | -3,456 | 6.6e-6 |
| chr17_6666312_C_T | chr17:6666312 | -4,992 | -768 | -2,688 | 1.3e-5 |
| chr17_6683435_G_A | chr17:6683435 | -4,992 | -1,600 | -2,688 | 4.0e-1 |
| chr17_6700124_T_A | chr17:6700124 | 4,864 | 3,008 | 1,920 | — |
| chr17_6683315_G_A | chr17:6683315 | -4,800 | -1,312 | -3,072 | 2.0e-5 |
| chr17_6700041_C_T | chr17:6700041 | -4,800 | -832 | -1,792 | 6.6e-6 |
| chr17_6700120_G_A | chr17:6700120 | -4,800 | -1,216 | -2,560 | — |
| chr17_6700121_A_T | chr17:6700121 | 4,800 | 832 | 2,304 | — |
| chr17_6657202_T_A | chr17:6657202 | 4,784 | 1,648 | 15,424 | 6.6e-6 |
| chr17_6657153_C_T | chr17:6657153 | 4,744 | 1,800 | 7,936 | 6.6e-6 |
| chr17_6683267_T_A | chr17:6683267 | -4,736 | -2,304 | -1,792 | 6.6e-6 |
| chr17_6700102_G_A | chr17:6700102 | -4,672 | -1,024 | -2,048 | 6.6e-6 |
| chr17_6700123_C_T | chr17:6700123 | -4,672 | -832 | -3,072 | — |
| chr17_6677595_C_T | chr17:6677595 | 4,608 | 464 | 2,688 | 7.2e-5 |
| chr17_6700121_A_C | chr17:6700121 | 4,608 | 1,920 | 2,560 | — |
| chr17_6700126_A_G | chr17:6700126 | 4,608 | 320 | 2,304 | — |
| chr17_6666175_C_T | chr17:6666175 | -4,544 | 352 | -256 | 1.3e-5 |
| chr17_6677228_A_G | chr17:6677228 | 4,544 | 1,760 | 3,968 | 1.7e-3 |
| chr17_6677294_C_T | chr17:6677294 | 4,544 | 1,296 | 2,432 | 6.6e-6 |
| chr17_6677319_G_T | chr17:6677319 | -4,544 | -1,008 | -3,072 | 3.9e-5 |
| chr17_6657369_A_T | chr17:6657369 | -4,480 | -2,368 | -7,936 | 6.6e-6 |
| chr17_6666211_A_G | chr17:6666211 | 4,480 | 352 | 1,792 | 1.5e-1 |
| chr17_6666249_C_A | chr17:6666249 | -4,352 | -800 | -3,456 | 6.6e-6 |
| chr17_6700117_T_A | chr17:6700117 | 4,352 | 1,088 | 1,024 | — |
| chr17_6677184_T_C | chr17:6677184 | 4,224 | 880 | 2,432 | 2.9e-2 |
| chr17_6677491_G_C | chr17:6677491 | -4,224 | -1,168 | -2,048 | 6.6e-6 |
| chr17_6700118_C_G | chr17:6700118 | 4,224 | 1,600 | 768 | — |
| chr17_6657207_C_G | chr17:6657207 | 4,192 | 1,040 | 9,920 | 6.6e-6 |
| chr17_6677597_A_G | chr17:6677597 | 4,160 | 160 | 4,096 | 6.6e-6 |
| chr17_6677243_C_T | chr17:6677243 | 4,096 | 2,896 | 1,408 | 3.9e-5 |
| chr17_6677167_A_G | chr17:6677167 | 4,032 | 816 | 3,584 | 1.3e-5 |
| chr17_6666233_A_G | chr17:6666233 | 3,904 | 1,888 | 2,688 | 6.6e-6 |
| chr17_6666102_G_A | chr17:6666102 | -3,840 | 0 | -2,432 | 9.2e-5 |
| chr17_6666417_C_T | chr17:6666417 | -3,840 | -864 | -2,560 | 6.6e-6 |
| chr17_6700120_G_C | chr17:6700120 | 3,840 | 640 | 384 | — |
| chr17_6700122_G_A | chr17:6700122 | -3,840 | -1,536 | -1,280 | — |
| chr17_6666309_A_G | chr17:6666309 | 3,808 | -128 | 1,024 | 6.6e-6 |
| chr17_6666395_C_A | chr17:6666395 | 3,776 | 736 | 512 | 6.6e-6 |
| chr17_6700024_G_C | chr17:6700024 | 3,712 | 6,144 | 2,176 | 6.6e-6 |
| chr17_6666152_T_A | chr17:6666152 | -3,712 | -480 | -1,920 | 6.6e-6 |
| chr17_6677558_G_T | chr17:6677558 | -3,712 | -128 | -3,072 | 2.0e-5 |
| chr17_6700119_A_C | chr17:6700119 | -3,712 | -1,088 | 256 | — |
| chr17_6666248_G_A | chr17:6666248 | -3,680 | -256 | -1,408 | 9.1e-3 |
| chr17_6700025_C_A | chr17:6700025 | -3,584 | -1,216 | -1,408 | 6.6e-6 |
| chr17_6683195_G_T | chr17:6683195 | -3,520 | -1,056 | -2,304 | 6.6e-6 |
| chr17_6700125_G_T | chr17:6700125 | -3,520 | -832 | -1,024 | — |
| chr17_6677158_C_T | chr17:6677158 | -3,456 | -752 | -2,688 | 1.5e-3 |
| chr17_6677600_G_T | chr17:6677600 | -3,456 | -160 | 640 | 2.6e-5 |
| chr17_6666250_G_T | chr17:6666250 | 3,424 | 448 | 512 | 1.3e-5 |
| chr17_6700113_T_A | chr17:6700113 | 3,392 | 704 | 1,408 | — |
| chr17_6666210_C_A | chr17:6666210 | 3,360 | 64 | -768 | 2.6e-5 |
| chr17_6700052_A_G | chr17:6700052 | -3,360 | -1,280 | -768 | 1.3e-5 |
| chr17_6666337_A_G | chr17:6666337 | 3,328 | 416 | 2,560 | 1.3e-3 |
| chr17_6677342_C_T | chr17:6677342 | -3,328 | -1,008 | -2,560 | 6.6e-6 |
| chr17_6683476_C_T | chr17:6683476 | -3,328 | -1,568 | -2,304 | 6.2e-4 |
| chr17_6657228_G_T | chr17:6657228 | 3,216 | -112 | 4,096 | 6.6e-6 |
| chr17_6666520_G_A | chr17:6666520 | -3,136 | -768 | -3,328 | 6.6e-6 |
| chr17_6657145_G_A | chr17:6657145 | 3,104 | 680 | 5,344 | 6.6e-6 |
| chr17_6657246_C_T | chr17:6657246 | 3,088 | 2,768 | 8,064 | 2.0e-5 |
| chr17_6683231_G_A | chr17:6683231 | -3,072 | -4,224 | -2,176 | 6.6e-6 |
| chr17_6677651_C_A | chr17:6677651 | 2,944 | 704 | 6,272 | 6.6e-6 |
| chr17_6683231_G_T | chr17:6683231 | -2,880 | -4,352 | -2,176 | 6.6e-6 |
| chr17_6676973_G_A | chr17:6676973 | -2,880 | -768 | -3,328 | 8.5e-5 |
| chr17_6657247_C_G | chr17:6657247 | 2,832 | 3,664 | 16,960 | 6.1e-4 |
| chr17_6656974_G_T | chr17:6656974 | 2,792 | 224 | 9,184 | 6.6e-6 |
| chr17_6657372_T_G | chr17:6657372 | -2,624 | -912 | -3,712 | 5.4e-1 |
| chr17_6657276_C_T | chr17:6657276 | 2,592 | 912 | 4,736 | 5.4e-1 |
| chr17_6657273_G_C | chr17:6657273 | 2,304 | -1,168 | 4,352 | 6.6e-6 |
| chr17_6677404_G_T | chr17:6677404 | 2,304 | 848 | 3,712 | 6.6e-6 |
| chr17_6657232_G_A | chr17:6657232 | 2,288 | 1,440 | 3,456 | 2.0e-5 |
| chr17_6669262_T_A | chr17:6669262 | 2,240 | -320 | 3,584 | 6.6e-6 |
| chr17_6683894_T_C | chr17:6683894 | -2,176 | -1,632 | -9,728 | 6.6e-6 |
| chr17_6657219_A_G | chr17:6657219 | 2,032 | 672 | 4,992 | 6.6e-6 |
| chr17_6656969_A_C | chr17:6656969 | 2,000 | 400 | 5,728 | 6.6e-6 |
| chr17_6657225_C_G | chr17:6657225 | 1,984 | 1,568 | 3,392 | 6.6e-6 |
| chr17_6683879_C_T | chr17:6683879 | 1,920 | 992 | 3,968 | 6.6e-6 |
| chr17_6657132_T_C | chr17:6657132 | 1,816 | 712 | 3,904 | 6.6e-6 |
| chr17_6677670_C_T | chr17:6677670 | 1,536 | 368 | 3,840 | 6.6e-6 |
| chr17_6657172_C_G | chr17:6657172 | 1,488 | 472 | 4,544 | 1.3e-5 |
| chr17_6657316_G_A | chr17:6657316 | -1,472 | 560 | 4,608 | 1.3e-5 |
| chr17_6657305_T_C | chr17:6657305 | 1,408 | 3,552 | 26,624 | 6.6e-6 |
| chr17_6676515_C_G | chr17:6676515 | 1,344 | -304 | 3,328 | 6.6e-6 |
| chr17_6657170_C_G | chr17:6657170 | 1,320 | 368 | 4,160 | 6.6e-6 |
| chr17_6657443_T_G | chr17:6657443 | -1,280 | -912 | -5,248 | 6.8e-6 |
| chr17_6684189_A_G | chr17:6684189 | -1,216 | -1,056 | -3,712 | 6.6e-6 |
| chr17_6657302_A_C | chr17:6657302 | -1,200 | 288 | 9,664 | 6.6e-6 |
| chr17_6656974_G_C | chr17:6656974 | 1,200 | 424 | 4,640 | 6.6e-6 |
| chr17_6656855_G_C | chr17:6656855 | 1,176 | 1,088 | 5,728 | 2.0e-5 |
| chr17_6657280_C_T | chr17:6657280 | -1,168 | -3,104 | 6,272 | 6.6e-6 |
| chr17_6676489_C_A | chr17:6676489 | 1,152 | 240 | 4,352 | 1.3e-5 |
| chr17_6666200_C_G | chr17:6666200 | 1,152 | 1,696 | 3,328 | 2.0e-5 |
| chr17_6656872_C_A | chr17:6656872 | 1,104 | 744 | 6,176 | 2.0e-5 |
| chr17_6657281_G_A | chr17:6657281 | 1,088 | -3,680 | 6,784 | 6.6e-6 |
| chr17_6656850_G_C | chr17:6656850 | 912 | 880 | 5,024 | 4.6e-5 |
| chr17_6657011_G_A | chr17:6657011 | 904 | 384 | 4,320 | 6.6e-6 |
| chr17_6657445_C_G | chr17:6657445 | -896 | -1,200 | -7,040 | 5.4e-1 |
| chr17_6677577_T_C | chr17:6677577 | -896 | -64 | 6,784 | 4.1e-4 |
| chr17_6683351_T_C | chr17:6683351 | 896 | -192 | -4,864 | 1.3e-5 |
| chr17_6657457_G_T | chr17:6657457 | 832 | 128 | 4,480 | 6.6e-6 |
| chr17_6656851_G_A | chr17:6656851 | 816 | 784 | 4,320 | 2.6e-5 |
| chr17_6657374_G_A | chr17:6657374 | 800 | 128 | 4,864 | 5.4e-1 |
| chr17_6657196_C_A | chr17:6657196 | -752 | -176 | 4,672 | 6.6e-6 |
| chr17_6669225_T_G | chr17:6669225 | -704 | -272 | 4,992 | 6.6e-6 |
| chr17_6656857_G_A | chr17:6656857 | 600 | 600 | 3,520 | 1.3e-5 |
| chr17_6656859_G_A | chr17:6656859 | 512 | 632 | 3,360 | 6.6e-6 |
| chr17_6677637_T_C | chr17:6677637 | 448 | -16 | 5,248 | 6.6e-6 |
| chr17_6676512_C_T | chr17:6676512 | 384 | -272 | 3,456 | 6.6e-6 |
| chr17_6677621_G_T | chr17:6677621 | -192 | -208 | 5,504 | 6.6e-6 |
Showing 200 of 200 in this window. Scores are the raw center bin Δ, ALT minus REF; click a column to sort.